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The map label for this gene is 18977211

Identifier: 18977211

GI number: 18977211

Start: 813549

End: 813929

Strand: Direct

Name: 18977211

Synonym: PF0839

Alternate gene names: NA

Gene position: 813549-813929 (Clockwise)

Preceding gene: 18977210

Following gene: 18977212

Centisome position: 42.63

GC content: 35.43

Gene sequence:

>381_bases
ATGTTTCTTGTGGATACAAATGTTTTCTTGGAGATCCTTCTTGGTCAAAAGAAGAAAGAGGAGGCAAAGAAATTTCTTTC
TGAGAATATTGATAGACTTTATATGACAGATTTTTCTCTGCACTCAATTGGAGTGATACTTTTCAAATTAAGAAAACCAG
AGGTTTTTGAAGAATTCATAGAAGATGTTCTTCCAAATGTGGAGATTCTCTCTTTACCAGTAGAGGGCTATCCAGAACTC
ATTAGGATACATAAGACCCTCAATCTTGATTTCGACGATGCCTACCAGTGTGCTGTTGCAAACGTTTTTGATCTTACAGT
AGTCACTATGGACACGGATTTCACAAAAGCTTTGAATTATGTAAAAATCCTCTTTTTGTGA

Upstream 100 bases:

>100_bases
AGAAAAAAAGAAAGGGATTCACGTTTTCATGGGAAGGCAAAGTTAAGTCGGAGCTTTCCTCAGTTGAACTTCAACACAAG
GCTTTGGAGTGGAGGACTTG

Downstream 100 bases:

>100_bases
TAGCAATGATAATCATCTTAGCGGGTGGAAAGTCTACCAGAATGGGATAAAGAAAAACCAGTATTGAAAATAGCAGATAA
ACAATGAGAGCTCAAAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Protein-Like; PilT Domain-Containing Protein; PIN Domain Protein

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MFLVDTNVFLEILLGQKKKEEAKKFLSENIDRLYMTDFSLHSIGVILFKLRKPEVFEEFIEDVLPNVEILSLPVEGYPEL
IRIHKTLNLDFDDAYQCAVANVFDLTVVTMDTDFTKALNYVKILFL

Sequences:

>Translated_126_residues
MFLVDTNVFLEILLGQKKKEEAKKFLSENIDRLYMTDFSLHSIGVILFKLRKPEVFEEFIEDVLPNVEILSLPVEGYPEL
IRIHKTLNLDFDDAYQCAVANVFDLTVVTMDTDFTKALNYVKILFL
>Mature_126_residues
MFLVDTNVFLEILLGQKKKEEAKKFLSENIDRLYMTDFSLHSIGVILFKLRKPEVFEEFIEDVLPNVEILSLPVEGYPEL
IRIHKTLNLDFDDAYQCAVANVFDLTVVTMDTDFTKALNYVKILFL

Specific function: Unknown

COG id: COG2402

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14652; Mature: 14652

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLVDTNVFLEILLGQKKKEEAKKFLSENIDRLYMTDFSLHSIGVILFKLRKPEVFEEFI
CEEECHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHEEECCCCHHHHHHH
EDVLPNVEILSLPVEGYPELIRIHKTLNLDFDDAYQCAVANVFDLTVVTMDTDFTKALNY
HHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEEEECCCHHHHHHH
VKILFL
HEEEEC
>Mature Secondary Structure
MFLVDTNVFLEILLGQKKKEEAKKFLSENIDRLYMTDFSLHSIGVILFKLRKPEVFEEFI
CEEECHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHEEECCCCHHHHHHH
EDVLPNVEILSLPVEGYPELIRIHKTLNLDFDDAYQCAVANVFDLTVVTMDTDFTKALNY
HHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEEEECCCHHHHHHH
VKILFL
HEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA