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The map label for this gene is ydcM [C]

Identifier: 18977132

GI number: 18977132

Start: 753911

End: 754933

Strand: Direct

Name: ydcM [C]

Synonym: PF0760

Alternate gene names: 18977132

Gene position: 753911-754933 (Clockwise)

Preceding gene: 18977131

Following gene: 18977135

Centisome position: 39.51

GC content: 45.06

Gene sequence:

>1023_bases
TTGCCCAAGTGGTTCAAGCCAAAACCACCAAACTACTTGAAGGATGGCGGGAAGAGAAAACCACTAATCATCCTAAGAAA
CGACCAATACAAGATTGATGGGAATACGCTCATTCTCAAAGGTCTTGGCAGGTTTAAACGCTTGGAAATTCAATTCAAGG
GGAGAATACACTTGAAAGGCAAACAAGGAAGATTGGAAATAACTTATGATGAAGTTAAGCGAAAATGGTACGCCCACATT
TCATTTACTGTAGAAGAAAAATTAACCAGAAAAGGTTGGGTTAAAATCCCAAGACAACCCTTGGGGAACCTTTCAGCAGG
AATAGACTTGGGTGTAAACAATTTAATGGCCGTTTACGTCGAGAACGGGGAAAGCTTCCTCGTGAATGGGAGGCCGTTAA
AGAGCATTGGATTTTACTTTCAGAAGAAAGTAGCTGACTATCAGTCTAAACTCAACAAGTCGGGGACTAAAACGAGCAGA
AAACTCAGAAGACTGTACGAGAGGGCTAAGCTTCAAGCAAGGCACTATATTAACACTGCAGTAAGGCAAACTGTCAAGAG
GCTTTACCATCTTGGAGTTTCAAGAATTATCGTGGGCTATCCTAAAGGCATTATCAGGAATTCTAACAAGGGTAAAAAGC
AGAATTTCTTGCTTTCTCATATTTGGCAGTTCAATTACGTTATTAAACGTTTGATTGAAGTTGCTGAGGAGTATAGTATT
CTCGTCGAGGTTGTTGAGGAGGCTTTCACGTCTAAGCTTTGCCCCGTTTGCGGGAGGCCCCATGAAGGGGCTCGCTTTAC
TCGAGGATTATTTAAGTGTCCCGCAACGGGGCTCATCTTCAACGCGGACTTAGTTGGTGCCTTTAACATCTTGAAGAAGG
TTATTAGAACGATAACCCAGAACTTGGGTGGTCTTTACGCCCAAGGGAGGGGTAATGGGCCTGAGACCGGGCCCTCGGGC
CGAACCGAAACCGGTGACGGGAGTAGGTGGATGAGAGCCCGCAAACCTCTCCCCGCCCGTTGA

Upstream 100 bases:

>100_bases
AGAAGATTGTTTACGAAGAATTCAAGCAAGAAACAGGTTCTGCAACTGTTCAACAGATAGCCAGGAAGAATGCTGAGGCT
TGGAGGAGTTTCTTCACTAA

Downstream 100 bases:

>100_bases
AAGCCTCGCCCTTCAAGGCGGGGAGGAGGTCAGGAGGAGATAACCGTTAAGCCATTTTCAAGGGAACTATCCAAGGAATT
CTTAAGGAGGGGATTCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: IS Element ISTsi3 OrfB Probably Transposase; Transposase ISC; Neutral Protease; Transposase And Inactivated Derivatives; C-Terminal Of Inactivated Transposase; ISChy8 Transposase; Transposase Family; IS Element ISDka2 OrfB; Transposase Family Protein; IS Element ISTsi2 OrfB Probably Transposase; Transposase OrfB; Transposase IS; ISSoc6 OrfB Transposase

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MPKWFKPKPPNYLKDGGKRKPLIILRNDQYKIDGNTLILKGLGRFKRLEIQFKGRIHLKGKQGRLEITYDEVKRKWYAHI
SFTVEEKLTRKGWVKIPRQPLGNLSAGIDLGVNNLMAVYVENGESFLVNGRPLKSIGFYFQKKVADYQSKLNKSGTKTSR
KLRRLYERAKLQARHYINTAVRQTVKRLYHLGVSRIIVGYPKGIIRNSNKGKKQNFLLSHIWQFNYVIKRLIEVAEEYSI
LVEVVEEAFTSKLCPVCGRPHEGARFTRGLFKCPATGLIFNADLVGAFNILKKVIRTITQNLGGLYAQGRGNGPETGPSG
RTETGDGSRWMRARKPLPAR

Sequences:

>Translated_340_residues
MPKWFKPKPPNYLKDGGKRKPLIILRNDQYKIDGNTLILKGLGRFKRLEIQFKGRIHLKGKQGRLEITYDEVKRKWYAHI
SFTVEEKLTRKGWVKIPRQPLGNLSAGIDLGVNNLMAVYVENGESFLVNGRPLKSIGFYFQKKVADYQSKLNKSGTKTSR
KLRRLYERAKLQARHYINTAVRQTVKRLYHLGVSRIIVGYPKGIIRNSNKGKKQNFLLSHIWQFNYVIKRLIEVAEEYSI
LVEVVEEAFTSKLCPVCGRPHEGARFTRGLFKCPATGLIFNADLVGAFNILKKVIRTITQNLGGLYAQGRGNGPETGPSG
RTETGDGSRWMRARKPLPAR
>Mature_339_residues
PKWFKPKPPNYLKDGGKRKPLIILRNDQYKIDGNTLILKGLGRFKRLEIQFKGRIHLKGKQGRLEITYDEVKRKWYAHIS
FTVEEKLTRKGWVKIPRQPLGNLSAGIDLGVNNLMAVYVENGESFLVNGRPLKSIGFYFQKKVADYQSKLNKSGTKTSRK
LRRLYERAKLQARHYINTAVRQTVKRLYHLGVSRIIVGYPKGIIRNSNKGKKQNFLLSHIWQFNYVIKRLIEVAEEYSIL
VEVVEEAFTSKLCPVCGRPHEGARFTRGLFKCPATGLIFNADLVGAFNILKKVIRTITQNLGGLYAQGRGNGPETGPSGR
TETGDGSRWMRARKPLPAR

Specific function: Unknown

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38841; Mature: 38710

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKWFKPKPPNYLKDGGKRKPLIILRNDQYKIDGNTLILKGLGRFKRLEIQFKGRIHLKG
CCCCCCCCCCCHHHCCCCCCCEEEEECCCEEECCCEEEEECCCCCEEEEEEEECEEEEEC
KQGRLEITYDEVKRKWYAHISFTVEEKLTRKGWVKIPRQPLGNLSAGIDLGVNNLMAVYV
CCCCEEEEHHHHHHHHHHEEEEEHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCEEEEEE
ENGESFLVNGRPLKSIGFYFQKKVADYQSKLNKSGTKTSRKLRRLYERAKLQARHYINTA
ECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VRQTVKRLYHLGVSRIIVGYPKGIIRNSNKGKKQNFLLSHIWQFNYVIKRLIEVAEEYSI
HHHHHHHHHHHCHHHHEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVEVVEEAFTSKLCPVCGRPHEGARFTRGLFKCPATGLIFNADLVGAFNILKKVIRTITQ
HHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHH
NLGGLYAQGRGNGPETGPSGRTETGDGSRWMRARKPLPAR
HHCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
PKWFKPKPPNYLKDGGKRKPLIILRNDQYKIDGNTLILKGLGRFKRLEIQFKGRIHLKG
CCCCCCCCCCHHHCCCCCCCEEEEECCCEEECCCEEEEECCCCCEEEEEEEECEEEEEC
KQGRLEITYDEVKRKWYAHISFTVEEKLTRKGWVKIPRQPLGNLSAGIDLGVNNLMAVYV
CCCCEEEEHHHHHHHHHHEEEEEHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCEEEEEE
ENGESFLVNGRPLKSIGFYFQKKVADYQSKLNKSGTKTSRKLRRLYERAKLQARHYINTA
ECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VRQTVKRLYHLGVSRIIVGYPKGIIRNSNKGKKQNFLLSHIWQFNYVIKRLIEVAEEYSI
HHHHHHHHHHHCHHHHEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVEVVEEAFTSKLCPVCGRPHEGARFTRGLFKCPATGLIFNADLVGAFNILKKVIRTITQ
HHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHH
NLGGLYAQGRGNGPETGPSGRTETGDGSRWMRARKPLPAR
HHCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA