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The map label for this gene is 18977033

Identifier: 18977033

GI number: 18977033

Start: 672050

End: 672844

Strand: Direct

Name: 18977033

Synonym: PF0661

Alternate gene names: NA

Gene position: 672050-672844 (Clockwise)

Preceding gene: 33359496

Following gene: 18977034

Centisome position: 35.22

GC content: 54.97

Gene sequence:

>795_bases
ATGGTGAGCTGTATGATCGATGAGAAGCTCGTTGAAAACCTCAAGCGCCTTGGCCTTAAGGACTACGAGGCTAGGGTTTA
CGCCGCTTTGGTGCTCCTTGGTCCCTCAAAGGCAAGCGAAGTGGCAAGGGAGAGCGGCGTTCCGAGGCCGAAGGTCTACG
AGGTATTGAAAGAGCTTCACAGGAAGGGCTTTGTTGACTTCAGCGAGGGGAAGCCTGCCTTCTTCCGCGCGGTGGAGCCG
GAGAAGGTCATAGGGGTACTCAGGGACGAGTACATAAAGTCGGCCGAAGAGGCGATAATCTCCCTCAAAAGCGGGGGTAA
GCAGGAAGAGGAGTGGTATCCCGTGTGGTACCTTCAGGGGGAGTGGAACATCCGCAGGAAGGCCGAAGAACTCATCGATG
GGGCACAAAGGGAGATCATGGCGGCCTTTGTTGATAGGCGCTTCTCCAGAAAGCTTGTGAGGGCTTTAAGGAACGCCTGC
AGGAGAGAGGTTGAGGTTACCGTCCTTCTCCTCGGAGGGAAGAGGCCGAAGTACCTTGAGGGAGTGAGTGTTGAGTTAGT
TGACCCGAAGAAGCTCCAGAGGAAGGAGGATCTCAGGGACATCTTCATCAACTCGATGTTTGAAGGTCCCTACGCCGTCA
AAGCTCTGATCATCGTCGATTCCAGGGAGTCACTGATGATATACGAGGAGAAGGGCGCACTAAAGGGCATCCTCGTGACG
ATACCCTTCATTCCGACCTTCCAGAGGGCGGCGCTGCTCTACCTCATGGATGAGACGGGTGCTGAACCTTCATAG

Upstream 100 bases:

>100_bases
CTTCCTCGCAAGCTTTGCCTTGAGGCTCATCTCACCACCGAAGGTCAATCGGGGAAAAGGAATAAAAGGATGTTGTAACT
ACTTGAGTTACATAACTTTG

Downstream 100 bases:

>100_bases
AATGACTTTGAGTAAGGATGAAAGGATTTGCCTTACCCGGATTCGAAACCCTAAAATACCTTGAAGTGTAAAGATGAAGG
GGATGCTGTGATATGGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; TrmB Family Transcriptional Regulator; Transcription Regulator; Sugar-Specific Transcriptional Regulator; Transcription Regulator Helix-Turn-Helix Family; Sugar-Specific Transcriptional Regulator TrmB Family; Heavy Metal Translocating P-Type ATPase

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MVSCMIDEKLVENLKRLGLKDYEARVYAALVLLGPSKASEVARESGVPRPKVYEVLKELHRKGFVDFSEGKPAFFRAVEP
EKVIGVLRDEYIKSAEEAIISLKSGGKQEEEWYPVWYLQGEWNIRRKAEELIDGAQREIMAAFVDRRFSRKLVRALRNAC
RREVEVTVLLLGGKRPKYLEGVSVELVDPKKLQRKEDLRDIFINSMFEGPYAVKALIIVDSRESLMIYEEKGALKGILVT
IPFIPTFQRAALLYLMDETGAEPS

Sequences:

>Translated_264_residues
MVSCMIDEKLVENLKRLGLKDYEARVYAALVLLGPSKASEVARESGVPRPKVYEVLKELHRKGFVDFSEGKPAFFRAVEP
EKVIGVLRDEYIKSAEEAIISLKSGGKQEEEWYPVWYLQGEWNIRRKAEELIDGAQREIMAAFVDRRFSRKLVRALRNAC
RREVEVTVLLLGGKRPKYLEGVSVELVDPKKLQRKEDLRDIFINSMFEGPYAVKALIIVDSRESLMIYEEKGALKGILVT
IPFIPTFQRAALLYLMDETGAEPS
>Mature_264_residues
MVSCMIDEKLVENLKRLGLKDYEARVYAALVLLGPSKASEVARESGVPRPKVYEVLKELHRKGFVDFSEGKPAFFRAVEP
EKVIGVLRDEYIKSAEEAIISLKSGGKQEEEWYPVWYLQGEWNIRRKAEELIDGAQREIMAAFVDRRFSRKLVRALRNAC
RREVEVTVLLLGGKRPKYLEGVSVELVDPKKLQRKEDLRDIFINSMFEGPYAVKALIIVDSRESLMIYEEKGALKGILVT
IPFIPTFQRAALLYLMDETGAEPS

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30156; Mature: 30156

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSCMIDEKLVENLKRLGLKDYEARVYAALVLLGPSKASEVARESGVPRPKVYEVLKELH
CCCCHHHHHHHHHHHHCCCCCHHHHEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH
RKGFVDFSEGKPAFFRAVEPEKVIGVLRDEYIKSAEEAIISLKSGGKQEEEWYPVWYLQG
HCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC
EWNIRRKAEELIDGAQREIMAAFVDRRFSRKLVRALRNACRREVEVTVLLLGGKRPKYLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHC
GVSVELVDPKKLQRKEDLRDIFINSMFEGPYAVKALIIVDSRESLMIYEEKGALKGILVT
CCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEECCCCCCEEEEE
IPFIPTFQRAALLYLMDETGAEPS
ECCCCCHHHHHEEEEEECCCCCCC
>Mature Secondary Structure
MVSCMIDEKLVENLKRLGLKDYEARVYAALVLLGPSKASEVARESGVPRPKVYEVLKELH
CCCCHHHHHHHHHHHHCCCCCHHHHEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH
RKGFVDFSEGKPAFFRAVEPEKVIGVLRDEYIKSAEEAIISLKSGGKQEEEWYPVWYLQG
HCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC
EWNIRRKAEELIDGAQREIMAAFVDRRFSRKLVRALRNACRREVEVTVLLLGGKRPKYLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHC
GVSVELVDPKKLQRKEDLRDIFINSMFEGPYAVKALIIVDSRESLMIYEEKGALKGILVT
CCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEECCCCCCEEEEE
IPFIPTFQRAALLYLMDETGAEPS
ECCCCCHHHHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA