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The map label for this gene is kaiC [H]

Identifier: 18976997

GI number: 18976997

Start: 641065

End: 641844

Strand: Direct

Name: kaiC [H]

Synonym: PF0625

Alternate gene names: 18976997

Gene position: 641065-641844 (Clockwise)

Preceding gene: 18976994

Following gene: 18976998

Centisome position: 33.59

GC content: 38.08

Gene sequence:

>780_bases
ATGGGTAAGACTGGAATCGAATACTTTGACAATTTCATTCTTAAAGATGGTTTTCCCGATGGATCACTAATTTTAGTTGC
AGGAGAGCCGGGAGCTGGGAAGACTATATTTTCTGCAACATACCTATATAATGGCGCAAAGAAGTTTGGAGAAAAAGGGG
TATACATTTCACTGGCAGAAACAAAGAGAGAATTCTATGAGGCAATGAAACAACTGGGAATGGATTTTGAGGAGCTTGAA
AAGAAAGGACTTTTCAGATTCATTGATCTTGTAACTGTAAGTAGGGGAGCAATAGAAAAAGAAATACAATTTTTGATGAG
CGAAATTTCAAGCTTCCAACCTAAAAGGGTTGTAATTGACTCCATAAGCGTCTTTGCACAAATTTTGGGACTTGAAAAGA
CAAGAGTGTTTCTCCACACAATGCTTGGAAGATTTATAAAAGCTTACAATGCCACAGCACTCCTAATTGCTGAAAAGCCT
ATGGGAAGCAAAACAATAGGGCATGGAGTGGAAGAATTCGTTGTTGATGGGGTAATAATTCTCAAGTATAAATCACTTGG
AGAGATTACAAGAAGGGTAATGGAAATCCCAAAGATGAGAAGAAGAAGTGTTGAGAGAGCAGAATATGAGTATGTGATAA
CTAAGAATGGGATTGAGTTCCTGGAACTTCCAGATCTCGTAAGAGATAAGGGGGAATACACACTCGAAAAGATAACAACG
GGAATAGAAAAGCTCGATAAAATGCTAGATGGGGGATATACAAGGGATCAAATGTTCTAA

Upstream 100 bases:

>100_bases
AGATTTGGCCAAAATAACAGCTCTCGTGTTTTTTATTTCCTAACTAACTAAAAAACTTTAAATATGTCATAAAAGCATAT
AAAAAGAAGAGGGGAATAAA

Downstream 100 bases:

>100_bases
TTGTCGGCATGACTGGAACTGGAAAAACTACGTTTGCCCTACACTTTGCCATAGCAAATGCACTTCAGGGAAGGAAGGTA
GTTTACATAACTTTTGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MGKTGIEYFDNFILKDGFPDGSLILVAGEPGAGKTIFSATYLYNGAKKFGEKGVYISLAETKREFYEAMKQLGMDFEELE
KKGLFRFIDLVTVSRGAIEKEIQFLMSEISSFQPKRVVIDSISVFAQILGLEKTRVFLHTMLGRFIKAYNATALLIAEKP
MGSKTIGHGVEEFVVDGVIILKYKSLGEITRRVMEIPKMRRRSVERAEYEYVITKNGIEFLELPDLVRDKGEYTLEKITT
GIEKLDKMLDGGYTRDQMF

Sequences:

>Translated_259_residues
MGKTGIEYFDNFILKDGFPDGSLILVAGEPGAGKTIFSATYLYNGAKKFGEKGVYISLAETKREFYEAMKQLGMDFEELE
KKGLFRFIDLVTVSRGAIEKEIQFLMSEISSFQPKRVVIDSISVFAQILGLEKTRVFLHTMLGRFIKAYNATALLIAEKP
MGSKTIGHGVEEFVVDGVIILKYKSLGEITRRVMEIPKMRRRSVERAEYEYVITKNGIEFLELPDLVRDKGEYTLEKITT
GIEKLDKMLDGGYTRDQMF
>Mature_258_residues
GKTGIEYFDNFILKDGFPDGSLILVAGEPGAGKTIFSATYLYNGAKKFGEKGVYISLAETKREFYEAMKQLGMDFEELEK
KGLFRFIDLVTVSRGAIEKEIQFLMSEISSFQPKRVVIDSISVFAQILGLEKTRVFLHTMLGRFIKAYNATALLIAEKPM
GSKTIGHGVEEFVVDGVIILKYKSLGEITRRVMEIPKMRRRSVERAEYEYVITKNGIEFLELPDLVRDKGEYTLEKITTG
IEKLDKMLDGGYTRDQMF

Specific function: Core component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by actin

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR013503
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 29399; Mature: 29268

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS51146 KAIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTGIEYFDNFILKDGFPDGSLILVAGEPGAGKTIFSATYLYNGAKKFGEKGVYISLAE
CCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHH
TKREFYEAMKQLGMDFEELEKKGLFRFIDLVTVSRGAIEKEIQFLMSEISSFQPKRVVID
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
SISVFAQILGLEKTRVFLHTMLGRFIKAYNATALLIAEKPMGSKTIGHGVEEFVVDGVII
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHCCHHHHHHCCEEE
LKYKSLGEITRRVMEIPKMRRRSVERAEYEYVITKNGIEFLELPDLVRDKGEYTLEKITT
EEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHCCHHHHCCCCHHHHHHHH
GIEKLDKMLDGGYTRDQMF
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GKTGIEYFDNFILKDGFPDGSLILVAGEPGAGKTIFSATYLYNGAKKFGEKGVYISLAE
CCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHH
TKREFYEAMKQLGMDFEELEKKGLFRFIDLVTVSRGAIEKEIQFLMSEISSFQPKRVVID
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
SISVFAQILGLEKTRVFLHTMLGRFIKAYNATALLIAEKPMGSKTIGHGVEEFVVDGVII
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHCCHHHHHHCCEEE
LKYKSLGEITRRVMEIPKMRRRSVERAEYEYVITKNGIEFLELPDLVRDKGEYTLEKITT
EEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHCCHHHHCCCCHHHHHHHH
GIEKLDKMLDGGYTRDQMF
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12477935 [H]