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The map label for this gene is yddH [C]

Identifier: 18976974

GI number: 18976974

Start: 622480

End: 622998

Strand: Direct

Name: yddH [C]

Synonym: PF0602

Alternate gene names: 18976974

Gene position: 622480-622998 (Clockwise)

Preceding gene: 18976973

Following gene: 18976975

Centisome position: 32.62

GC content: 42.77

Gene sequence:

>519_bases
ATGCAGGCGTATAGACTTTTATATCCAATGAGAACCTATCTGGTTGTTTCTGGGAAGGGAGAAGAAGCTAACGTTATGGC
GGCTGATTGGGTGACGATTGTATCGTTTAATCCATTCTTAGTTGGAGTTGCTGTTGCTCCTCAAAGAACAACTCATGGAC
TAATAAAGAAGTATAAGGAGTTTGTAATCAGCGTTCCAAGCCTTGACATGCTTAGAGATGTCTGGATTGCTGGGACAAAG
AAGGGACCTGCAAAGCTAAAGGAGATGAACATAACCCTGATTCCCTCAAAGAACGTGAGCGTTCCAAGCATAAAGGAGGC
ATTGGCCAACATAGAATGTAAGGTTATAGATGAAAGAGATTACGGGGATCACATCTGGTTTGTGGGAGAAGTGGTTGGAT
ACTCCTACAATGAAGAGGCATTCAAGAACGGAAAGCCAAATCCAAAGGCTAAGTTCTTGGCACATCTATCCTGGACAGAA
TTCGTTACATTCTCTGAGGAGATATATAGGGCCGAATAA

Upstream 100 bases:

>100_bases
ACATATTTGGCAGGGATCCCTGGGATGTAATAAGGAAGCTTAGACTTATAGAGAAACATTTATGAAATCGTATTCATTTT
TATTACCCGGGGGTGATAAA

Downstream 100 bases:

>100_bases
TTAGTGTTGCTTTATTATTTATTTTCTATAAACTTTTTTTAAAGCTTTTGAGGGGTTTTTAGAGCTAAATACCTGCTTAA
GTGCTTAAGTAATTTTAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MQAYRLLYPMRTYLVVSGKGEEANVMAADWVTIVSFNPFLVGVAVAPQRTTHGLIKKYKEFVISVPSLDMLRDVWIAGTK
KGPAKLKEMNITLIPSKNVSVPSIKEALANIECKVIDERDYGDHIWFVGEVVGYSYNEEAFKNGKPNPKAKFLAHLSWTE
FVTFSEEIYRAE

Sequences:

>Translated_172_residues
MQAYRLLYPMRTYLVVSGKGEEANVMAADWVTIVSFNPFLVGVAVAPQRTTHGLIKKYKEFVISVPSLDMLRDVWIAGTK
KGPAKLKEMNITLIPSKNVSVPSIKEALANIECKVIDERDYGDHIWFVGEVVGYSYNEEAFKNGKPNPKAKFLAHLSWTE
FVTFSEEIYRAE
>Mature_172_residues
MQAYRLLYPMRTYLVVSGKGEEANVMAADWVTIVSFNPFLVGVAVAPQRTTHGLIKKYKEFVISVPSLDMLRDVWIAGTK
KGPAKLKEMNITLIPSKNVSVPSIKEALANIECKVIDERDYGDHIWFVGEVVGYSYNEEAFKNGKPNPKAKFLAHLSWTE
FVTFSEEIYRAE

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 19450; Mature: 19450

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAYRLLYPMRTYLVVSGKGEEANVMAADWVTIVSFNPFLVGVAVAPQRTTHGLIKKYKE
CCCHHHEEEEEEEEEEECCCCCCEEEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHH
FVISVPSLDMLRDVWIAGTKKGPAKLKEMNITLIPSKNVSVPSIKEALANIECKVIDERD
HEEECCCHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCEEEEEECCC
YGDHIWFVGEVVGYSYNEEAFKNGKPNPKAKFLAHLSWTEFVTFSEEIYRAE
CCCEEEEEEEECCCCCCCHHHHCCCCCCHHHEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQAYRLLYPMRTYLVVSGKGEEANVMAADWVTIVSFNPFLVGVAVAPQRTTHGLIKKYKE
CCCHHHEEEEEEEEEEECCCCCCEEEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHH
FVISVPSLDMLRDVWIAGTKKGPAKLKEMNITLIPSKNVSVPSIKEALANIECKVIDERD
HEEECCCHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCEEEEEECCC
YGDHIWFVGEVVGYSYNEEAFKNGKPNPKAKFLAHLSWTEFVTFSEEIYRAE
CCCEEEEEEEECCCCCCCHHHHCCCCCCHHHEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]