| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18976939
Identifier: 18976939
GI number: 18976939
Start: 587822
End: 590494
Strand: Reverse
Name: 18976939
Synonym: PF0567
Alternate gene names: NA
Gene position: 590494-587822 (Counterclockwise)
Preceding gene: 18976940
Following gene: 18976938
Centisome position: 30.94
GC content: 46.43
Gene sequence:
>2673_bases ATGTTACCGCAGTCGAGCTCTTACCCACTGCATATATCTTCCTCAAGGCCGTTCTTGAGTATCCAAAGAAGTTTGGGAGA CAATTGGTTATTGGTTAAGGACGTGGAGAAGTGGGGGAACTGGATAACCGAGCAACTCAAGAACGACCCCGAGATTAGGG AACTCTACGATGATGATGTAGCCGTTTACATAGGCACCTGGGAAGTTAAGTGCCCCCACTGTGGAAGGTGGACTCCAGCC GTAGGGAACTTCTGGCTCGCAAGAGTTAAAGATGAGAAGAGCTACAAGAGGCTCGCCTACATGAAGGTAGAGCCCAATGG AGAGGTTAGGATAATTGACCTAAACGAGATATTCGCAGATGTTTCAAGAGCCAAGGTAAGCACGGAGAGGGGAGAAATAG TCCTGGAGGGAAAGGGATACGTGGAAAAGGTCAAGAAGGCCATCGAAAGTGGAAAGATCAAGGAAGAGGACGTTAAAATA GAGGGAAGCAAGGTTGTTTTTAGAGTTCCAAAGCCAAACATAGAAGCGAGGAAGAGCCAGCTTGTCTGCTTATCATGTGG TAACGTGATTAAGTATGTGGATGAGGATGGAAATCACTACATCGAGAAGCCCAGGGGAAGGGATGTAGACTTCTATGTGA AGTTCGCTTTGAAGAAGTACCACGAAGGAGATGAAAGGTTTGCGAGGCAAAGATTACTAGTGAAGGTGAAGGTTAAAAAC AAAGATTTGATCTTCGAGCCCGCCACAAGGGAGGACAACGAGAAGCTTTGGAAGGCAAAAGAAAAAGTCAGGGAGATGCT TGAGAAGGGAGACCCGGACGTGCCGAGTGAAAAAGTCGCATATTATCAACTTCAGCCTCCAGCCAACTTCCCAACGCTTT TACATGGCATGGATACTTGGGACAAATACTTCAACCCCCGTCAGCTTCTCACCCTCATAAAGATCGTGAGGTTGATAAGG GAAACTGGTAAGAGAATCGAGGAGGAGAAGCTCAAGGAAGGCTGGAGCGAAGAGAAAGCCTTTGAGTACGCGGAGGCCGT GGCGACGTATTTGAGCATGGCGATGTTGAGATATATGGATTTCAACTCTGTAACTAATCATTGGACAATTTCATGGTTAT TCCCAAATCAGACTCTTGCCAGCAGAGGTATTACCATGAACTGGAATTGGTGTGATGTTTATTTCAACGTCGATATGACT GGAACATTTAAACGATTTCTGCGTTCTCAGATTAGAGCTTTGAATTACCTCACCTCCGCCCTTTCTTCCTCCCAGAGAAC CCTCGCCGATTTCACAGAAAACTCCGTTAAAGTTCTCCAGGGCGACGCTACCTCGCTCAACCTCGGCGAGAAGTTCGACG TCATCGTGACTGACCCACCCTACGCCGACGATGTCCCGTACACAGAGCTTTCGGACTTTTACTATGTCTGGCTCAAGAGG GCTTTGAGCGACGTTGAGAACGGCAAACTCGTTCCAAGGTTCCACAAGGAAGCGTTTTTCAAAAGAATCGGCCCCAAATG GGTGGAAATCAAGACACAGTGGCAGGAATTTGCAAAGAAAGAAGTCTCCACTAATCCGGGCCGCTTTATGGAAGATGGGA ACAAAAAGGAGAAAGCCGTCCGGCACTTTGAGAACCTCTTCAGCCAGGCCTTCATCTCCATGAGGGAGCACCTCAAGGAT GACGGAATACTAGTTACCTACTACGCCCACACCGATCTGGAAAGCTGGATTACCTTAATAGAAGCCGGATGGAGAAAAGC AAAGCTCCAGATAACAAGAGCATTCCCCCTGGGAACTGAGTCATCTCAGAGAGTCACCGCCAGAGGAAAGATGGCCCTTG ACACTTCAGTAGTAGTTGTTTGGAGAAAGAAGAATGAAGAGAAAGAGGTTTGGGCAAGTGACCTTGAAGAGATCTTAACT GAGGTAGGAGTAAAGAGTGCCAAAGAGTTCCTCTCCTATGGACACCATGGATTGGATCTCCTCTATGGTGTAATGGCCTC AGTTCTCTCGGAAGTTACAAAGTATAAAGCAGTGAAATCCCCAAAGGGAGAGCTGAGCGTGAGGGAAATCCTAGAGAGGT ATGTATATCCAGCAACGATTAACGGAATAGTTGGGGCTATAGCTGAAGATGTAAAAGCTGAAATGCTCTCAAGAGAGGGG ATATTCTACACAGCTTATAAGGTGCTCTTTGGGAACGCAAAGGTTTCGCCGAACGATATAATACTACTAACCCTAGCTAC GGCCGTAGATTCTTCAAGCCTGCTAAAGCTTGAAATCTTAAAGAAGGTAAATGGTGAGCTTACGCTATACTCTCCCGACC TTTTGGGTAAGAAGGCCCTAGATACTAGGGAACTTCAGAAGTTCATTAAGGAGAGGGATGCAGAAAAGTATAGGAATGCA ATAGATGTTCTTCACGTACTTGAGCATGCTTCACTCCTGGGAGCTTCAAGGGTTAAGGAAATAAAGGAGGAACTCAAGAA AAACCATCCAACAGAGGTAGAAGAAGCCATAGCCATAGCAAGGCTCGTAGCTTCATACTATAAGAACGTCTATTCTATCG CCCTGGGAATTAAAGACGAGAGGGAGATCATGAAAAGATTGGAGAAAGATGGCCTTTATGAGGTCATCCTAATGGACAGG CTTATCAAGGCCGTTAGGGGTGAAATGTTATGA
Upstream 100 bases:
>100_bases CACAAAGCTAACCCAGAGCCAATGTTTATGGGGAAGAAGCTTCTCGATCCTTTTGCTGGGTTTGGCTCAATCCCACTCGA GGGTTTAAGGTTAGGACTTG
Downstream 100 bases:
>100_bases AGTTTGGAAAGCATGAAGTTTGGGAAGACGTTTTGGATGAAAGGCTTGATGAGGAAGTGGCCCCCGAATTGTACAAAGTA GTGGAGGGAAACGCACCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Methylase Containing A Zn-Ribbon Module; DNA Methylase
Number of amino acids: Translated: 890; Mature: 890
Protein sequence:
>890_residues MLPQSSSYPLHISSSRPFLSIQRSLGDNWLLVKDVEKWGNWITEQLKNDPEIRELYDDDVAVYIGTWEVKCPHCGRWTPA VGNFWLARVKDEKSYKRLAYMKVEPNGEVRIIDLNEIFADVSRAKVSTERGEIVLEGKGYVEKVKKAIESGKIKEEDVKI EGSKVVFRVPKPNIEARKSQLVCLSCGNVIKYVDEDGNHYIEKPRGRDVDFYVKFALKKYHEGDERFARQRLLVKVKVKN KDLIFEPATREDNEKLWKAKEKVREMLEKGDPDVPSEKVAYYQLQPPANFPTLLHGMDTWDKYFNPRQLLTLIKIVRLIR ETGKRIEEEKLKEGWSEEKAFEYAEAVATYLSMAMLRYMDFNSVTNHWTISWLFPNQTLASRGITMNWNWCDVYFNVDMT GTFKRFLRSQIRALNYLTSALSSSQRTLADFTENSVKVLQGDATSLNLGEKFDVIVTDPPYADDVPYTELSDFYYVWLKR ALSDVENGKLVPRFHKEAFFKRIGPKWVEIKTQWQEFAKKEVSTNPGRFMEDGNKKEKAVRHFENLFSQAFISMREHLKD DGILVTYYAHTDLESWITLIEAGWRKAKLQITRAFPLGTESSQRVTARGKMALDTSVVVVWRKKNEEKEVWASDLEEILT EVGVKSAKEFLSYGHHGLDLLYGVMASVLSEVTKYKAVKSPKGELSVREILERYVYPATINGIVGAIAEDVKAEMLSREG IFYTAYKVLFGNAKVSPNDIILLTLATAVDSSSLLKLEILKKVNGELTLYSPDLLGKKALDTRELQKFIKERDAEKYRNA IDVLHVLEHASLLGASRVKEIKEELKKNHPTEVEEAIAIARLVASYYKNVYSIALGIKDEREIMKRLEKDGLYEVILMDR LIKAVRGEML
Sequences:
>Translated_890_residues MLPQSSSYPLHISSSRPFLSIQRSLGDNWLLVKDVEKWGNWITEQLKNDPEIRELYDDDVAVYIGTWEVKCPHCGRWTPA VGNFWLARVKDEKSYKRLAYMKVEPNGEVRIIDLNEIFADVSRAKVSTERGEIVLEGKGYVEKVKKAIESGKIKEEDVKI EGSKVVFRVPKPNIEARKSQLVCLSCGNVIKYVDEDGNHYIEKPRGRDVDFYVKFALKKYHEGDERFARQRLLVKVKVKN KDLIFEPATREDNEKLWKAKEKVREMLEKGDPDVPSEKVAYYQLQPPANFPTLLHGMDTWDKYFNPRQLLTLIKIVRLIR ETGKRIEEEKLKEGWSEEKAFEYAEAVATYLSMAMLRYMDFNSVTNHWTISWLFPNQTLASRGITMNWNWCDVYFNVDMT GTFKRFLRSQIRALNYLTSALSSSQRTLADFTENSVKVLQGDATSLNLGEKFDVIVTDPPYADDVPYTELSDFYYVWLKR ALSDVENGKLVPRFHKEAFFKRIGPKWVEIKTQWQEFAKKEVSTNPGRFMEDGNKKEKAVRHFENLFSQAFISMREHLKD DGILVTYYAHTDLESWITLIEAGWRKAKLQITRAFPLGTESSQRVTARGKMALDTSVVVVWRKKNEEKEVWASDLEEILT EVGVKSAKEFLSYGHHGLDLLYGVMASVLSEVTKYKAVKSPKGELSVREILERYVYPATINGIVGAIAEDVKAEMLSREG IFYTAYKVLFGNAKVSPNDIILLTLATAVDSSSLLKLEILKKVNGELTLYSPDLLGKKALDTRELQKFIKERDAEKYRNA IDVLHVLEHASLLGASRVKEIKEELKKNHPTEVEEAIAIARLVASYYKNVYSIALGIKDEREIMKRLEKDGLYEVILMDR LIKAVRGEML >Mature_890_residues MLPQSSSYPLHISSSRPFLSIQRSLGDNWLLVKDVEKWGNWITEQLKNDPEIRELYDDDVAVYIGTWEVKCPHCGRWTPA VGNFWLARVKDEKSYKRLAYMKVEPNGEVRIIDLNEIFADVSRAKVSTERGEIVLEGKGYVEKVKKAIESGKIKEEDVKI EGSKVVFRVPKPNIEARKSQLVCLSCGNVIKYVDEDGNHYIEKPRGRDVDFYVKFALKKYHEGDERFARQRLLVKVKVKN KDLIFEPATREDNEKLWKAKEKVREMLEKGDPDVPSEKVAYYQLQPPANFPTLLHGMDTWDKYFNPRQLLTLIKIVRLIR ETGKRIEEEKLKEGWSEEKAFEYAEAVATYLSMAMLRYMDFNSVTNHWTISWLFPNQTLASRGITMNWNWCDVYFNVDMT GTFKRFLRSQIRALNYLTSALSSSQRTLADFTENSVKVLQGDATSLNLGEKFDVIVTDPPYADDVPYTELSDFYYVWLKR ALSDVENGKLVPRFHKEAFFKRIGPKWVEIKTQWQEFAKKEVSTNPGRFMEDGNKKEKAVRHFENLFSQAFISMREHLKD DGILVTYYAHTDLESWITLIEAGWRKAKLQITRAFPLGTESSQRVTARGKMALDTSVVVVWRKKNEEKEVWASDLEEILT EVGVKSAKEFLSYGHHGLDLLYGVMASVLSEVTKYKAVKSPKGELSVREILERYVYPATINGIVGAIAEDVKAEMLSREG IFYTAYKVLFGNAKVSPNDIILLTLATAVDSSSLLKLEILKKVNGELTLYSPDLLGKKALDTRELQKFIKERDAEKYRNA IDVLHVLEHASLLGASRVKEIKEELKKNHPTEVEEAIAIARLVASYYKNVYSIALGIKDEREIMKRLEKDGLYEVILMDR LIKAVRGEML
Specific function: Unknown
COG id: COG1743
COG function: function code L; Adenine-specific DNA methylase containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102511; Mature: 102511
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPQSSSYPLHISSSRPFLSIQRSLGDNWLLVKDVEKWGNWITEQLKNDPEIRELYDDDV CCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHCCCCE AVYIGTWEVKCPHCGRWTPAVGNFWLARVKDEKSYKRLAYMKVEPNGEVRIIDLNEIFAD EEEEEEEEEECCCCCCCCCCCCCEEEEEECCCHHHCEEEEEEECCCCCEEEEEHHHHHHH VSRAKVSTERGEIVLEGKGYVEKVKKAIESGKIKEEDVKIEGSKVVFRVPKPNIEARKSQ HHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEECCEEEEECCCCCCCHHCCC LVCLSCGNVIKYVDEDGNHYIEKPRGRDVDFYVKFALKKYHEGDERFARQRLLVKVKVKN EEEEECCCCHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEEEEEECC KDLIFEPATREDNEKLWKAKEKVREMLEKGDPDVPSEKVAYYQLQPPANFPTLLHGMDTW CCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHCCHHH DKYFNPRQLLTLIKIVRLIRETGKRIEEEKLKEGWSEEKAFEYAEAVATYLSMAMLRYMD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC FNSVTNHWTISWLFPNQTLASRGITMNWNWCDVYFNVDMTGTFKRFLRSQIRALNYLTSA CCCCCCCEEEEEECCCHHHHHCCCEEECEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH LSSSQRTLADFTENSVKVLQGDATSLNLGEKFDVIVTDPPYADDVPYTELSDFYYVWLKR HHCCHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH ALSDVENGKLVPRFHKEAFFKRIGPKWVEIKTQWQEFAKKEVSTNPGRFMEDGNKKEKAV HHHHHHCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCHHCCCCHHHHHH RHFENLFSQAFISMREHLKDDGILVTYYAHTDLESWITLIEAGWRKAKLQITRAFPLGTE HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEEEECCCCCC SSQRVTARGKMALDTSVVVVWRKKNEEKEVWASDLEEILTEVGVKSAKEFLSYGHHGLDL CCCEEEECCCEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHH LYGVMASVLSEVTKYKAVKSPKGELSVREILERYVYPATINGIVGAIAEDVKAEMLSREG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC IFYTAYKVLFGNAKVSPNDIILLTLATAVDSSSLLKLEILKKVNGELTLYSPDLLGKKAL CHHEEEHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCC DTRELQKFIKERDAEKYRNAIDVLHVLEHASLLGASRVKEIKEELKKNHPTEVEEAIAIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RLVASYYKNVYSIALGIKDEREIMKRLEKDGLYEVILMDRLIKAVRGEML HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLPQSSSYPLHISSSRPFLSIQRSLGDNWLLVKDVEKWGNWITEQLKNDPEIRELYDDDV CCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHCCCCE AVYIGTWEVKCPHCGRWTPAVGNFWLARVKDEKSYKRLAYMKVEPNGEVRIIDLNEIFAD EEEEEEEEEECCCCCCCCCCCCCEEEEEECCCHHHCEEEEEEECCCCCEEEEEHHHHHHH VSRAKVSTERGEIVLEGKGYVEKVKKAIESGKIKEEDVKIEGSKVVFRVPKPNIEARKSQ HHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEECCEEEEECCCCCCCHHCCC LVCLSCGNVIKYVDEDGNHYIEKPRGRDVDFYVKFALKKYHEGDERFARQRLLVKVKVKN EEEEECCCCHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEEEEEECC KDLIFEPATREDNEKLWKAKEKVREMLEKGDPDVPSEKVAYYQLQPPANFPTLLHGMDTW CCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHCCHHH DKYFNPRQLLTLIKIVRLIRETGKRIEEEKLKEGWSEEKAFEYAEAVATYLSMAMLRYMD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC FNSVTNHWTISWLFPNQTLASRGITMNWNWCDVYFNVDMTGTFKRFLRSQIRALNYLTSA CCCCCCCEEEEEECCCHHHHHCCCEEECEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH LSSSQRTLADFTENSVKVLQGDATSLNLGEKFDVIVTDPPYADDVPYTELSDFYYVWLKR HHCCHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH ALSDVENGKLVPRFHKEAFFKRIGPKWVEIKTQWQEFAKKEVSTNPGRFMEDGNKKEKAV HHHHHHCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCHHCCCCHHHHHH RHFENLFSQAFISMREHLKDDGILVTYYAHTDLESWITLIEAGWRKAKLQITRAFPLGTE HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEEEECCCCCC SSQRVTARGKMALDTSVVVVWRKKNEEKEVWASDLEEILTEVGVKSAKEFLSYGHHGLDL CCCEEEECCCEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHH LYGVMASVLSEVTKYKAVKSPKGELSVREILERYVYPATINGIVGAIAEDVKAEMLSREG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC IFYTAYKVLFGNAKVSPNDIILLTLATAVDSSSLLKLEILKKVNGELTLYSPDLLGKKAL CHHEEEHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCC DTRELQKFIKERDAEKYRNAIDVLHVLEHASLLGASRVKEIKEELKKNHPTEVEEAIAIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RLVASYYKNVYSIALGIKDEREIMKRLEKDGLYEVILMDRLIKAVRGEML HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA