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The map label for this gene is ydgJ [C]

Identifier: 18976926

GI number: 18976926

Start: 570884

End: 571873

Strand: Direct

Name: ydgJ [C]

Synonym: PF0554

Alternate gene names: 18976926

Gene position: 570884-571873 (Clockwise)

Preceding gene: 18976925

Following gene: 18976930

Centisome position: 29.92

GC content: 42.02

Gene sequence:

>990_bases
ATGAGAAAAGTTAAATTAGGATTAGTTGGTTGTGGAATTGCAGCAAAAACTCTCCACATTCCAGCTTTAAAGAAGCTTTC
TGAGTTGTTTGAGGTGACTGCAGTTACGAGTAGAACAAGAGCTCATGCCCAAGAATGCTCTAAGCTTTTGGGAGGAGTGG
AGGTTTTTGAAAGCTATGATGAGCTCCTTAAATCTGGAGAAGTAGATGCCGTTGATCTAGCACTTCCAGTTGAGTTAAAT
CTTCCATTTATAAAGAAAGCGGTTGAAAGTGGAGTTCATGTAATATGCGAAAAGCCCATCTCTACAGACACAAAGACTGG
AAAAGAGATCGTGAAAATAGCCGAAAGTTCAGATGTTGTTGTATATATAGCTGAGAACTTTAGGCATATCCCCGTTTTCT
GGAAGGCAAAAGAGCTTATTGAGAAGGGCAAAATCGGTGATCCGATTTTTATGAGTTGGCACATATGGGTTGGGATGGAC
GAGAGCAATCCCTACGTTCATACAGAGTGGAGAAAAAAGCCCAAACATATAGGAGGTTATCTTTCAGATGGTGGAGTTCA
TCATGTGGCGGCTATGAGACTTATTTTCGGCGACATTGTTTGGGTTTCTGCCGTTGTTCGCGACATATCTCCGTTGTTAG
GAGGGCCGGATTTCATTTCTTCCATACTAGAATTCGAAAGTGGAGTAGTGGGTAGCTACACTGCTGGATATCCAATTAAG
GGAAAGGATAGATTCGAGGTCGTTGGTACGGAGGGGAGAATGGTTATAGAGTGGGATAGGATAGTTCTCAATGGAGAAAG
TATTTATGTTAAGCCAGAGGATAGCTATAAGCTTGAGTTTAAGGACTTCTACTATGTCGTGAAAGGGAAGAGAGAAAATG
TTCTTGGCAGTCCGCTAGAGGCTCTGAAAGATCTCGCAGTTATAGAAGCGGCAGTTAACTCAAATGGGCAGAAAGTGAAT
GTTGGTGATCTCCTAGATTTGGAAAAGTAG

Upstream 100 bases:

>100_bases
GGGAGAGAGCAATATTCGAGACAAAAATAATTAAAGTGAAGGTAAGAAGAAAAGTAAGAGATGTCATCAAGTTAGATTAA
ATGCCATCGGGGGTAAAGTC

Downstream 100 bases:

>100_bases
ATATCCTAGGATATTTTTTATTTCTTAAACGCATTTCTCCTGAAGCTTCTTTATTTTTTTAATTTTCCTTTAGCTCTTTT
ATAAACTCTTCAAGCACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MRKVKLGLVGCGIAAKTLHIPALKKLSELFEVTAVTSRTRAHAQECSKLLGGVEVFESYDELLKSGEVDAVDLALPVELN
LPFIKKAVESGVHVICEKPISTDTKTGKEIVKIAESSDVVVYIAENFRHIPVFWKAKELIEKGKIGDPIFMSWHIWVGMD
ESNPYVHTEWRKKPKHIGGYLSDGGVHHVAAMRLIFGDIVWVSAVVRDISPLLGGPDFISSILEFESGVVGSYTAGYPIK
GKDRFEVVGTEGRMVIEWDRIVLNGESIYVKPEDSYKLEFKDFYYVVKGKRENVLGSPLEALKDLAVIEAAVNSNGQKVN
VGDLLDLEK

Sequences:

>Translated_329_residues
MRKVKLGLVGCGIAAKTLHIPALKKLSELFEVTAVTSRTRAHAQECSKLLGGVEVFESYDELLKSGEVDAVDLALPVELN
LPFIKKAVESGVHVICEKPISTDTKTGKEIVKIAESSDVVVYIAENFRHIPVFWKAKELIEKGKIGDPIFMSWHIWVGMD
ESNPYVHTEWRKKPKHIGGYLSDGGVHHVAAMRLIFGDIVWVSAVVRDISPLLGGPDFISSILEFESGVVGSYTAGYPIK
GKDRFEVVGTEGRMVIEWDRIVLNGESIYVKPEDSYKLEFKDFYYVVKGKRENVLGSPLEALKDLAVIEAAVNSNGQKVN
VGDLLDLEK
>Mature_329_residues
MRKVKLGLVGCGIAAKTLHIPALKKLSELFEVTAVTSRTRAHAQECSKLLGGVEVFESYDELLKSGEVDAVDLALPVELN
LPFIKKAVESGVHVICEKPISTDTKTGKEIVKIAESSDVVVYIAENFRHIPVFWKAKELIEKGKIGDPIFMSWHIWVGMD
ESNPYVHTEWRKKPKHIGGYLSDGGVHHVAAMRLIFGDIVWVSAVVRDISPLLGGPDFISSILEFESGVVGSYTAGYPIK
GKDRFEVVGTEGRMVIEWDRIVLNGESIYVKPEDSYKLEFKDFYYVVKGKRENVLGSPLEALKDLAVIEAAVNSNGQKVN
VGDLLDLEK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=285, Percent_Identity=22.4561403508772, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789848, Length=211, Percent_Identity=24.6445497630332, Blast_Score=62, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6323975, Length=354, Percent_Identity=33.3333333333333, Blast_Score=170, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36410; Mature: 36410

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVKLGLVGCGIAAKTLHIPALKKLSELFEVTAVTSRTRAHAQECSKLLGGVEVFESYD
CCEEEEEEEECCHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLKSGEVDAVDLALPVELNLPFIKKAVESGVHVICEKPISTDTKTGKEIVKIAESSDVV
HHHHCCCCCEEEEEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHCCCCCEE
VYIAENFRHIPVFWKAKELIEKGKIGDPIFMSWHIWVGMDESNPYVHTEWRKKPKHIGGY
EEEECCCEECCEEECHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEECHHHCCCHHCCCC
LSDGGVHHVAAMRLIFGDIVWVSAVVRDISPLLGGPDFISSILEFESGVVGSYTAGYPIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC
GKDRFEVVGTEGRMVIEWDRIVLNGESIYVKPEDSYKLEFKDFYYVVKGKRENVLGSPLE
CCCCEEEEECCCCEEEEEEEEEECCCEEEEECCCCCEEEEEEEEEEEECCCCCCCCCHHH
ALKDLAVIEAAVNSNGQKVNVGDLLDLEK
HHHHHHHHHHHHCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MRKVKLGLVGCGIAAKTLHIPALKKLSELFEVTAVTSRTRAHAQECSKLLGGVEVFESYD
CCEEEEEEEECCHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLKSGEVDAVDLALPVELNLPFIKKAVESGVHVICEKPISTDTKTGKEIVKIAESSDVV
HHHHCCCCCEEEEEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHCCCCCEE
VYIAENFRHIPVFWKAKELIEKGKIGDPIFMSWHIWVGMDESNPYVHTEWRKKPKHIGGY
EEEECCCEECCEEECHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEECHHHCCCHHCCCC
LSDGGVHHVAAMRLIFGDIVWVSAVVRDISPLLGGPDFISSILEFESGVVGSYTAGYPIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC
GKDRFEVVGTEGRMVIEWDRIVLNGESIYVKPEDSYKLEFKDFYYVVKGKRENVLGSPLE
CCCCEEEEECCCCEEEEEEEEEECCCEEEEECCCCCEEEEEEEEEEEECCCCCCCCCHHH
ALKDLAVIEAAVNSNGQKVNVGDLLDLEK
HHHHHHHHHHHHCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]