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The map label for this gene is hypC [H]

Identifier: 18976920

GI number: 18976920

Start: 566642

End: 566869

Strand: Direct

Name: hypC [H]

Synonym: PF0548

Alternate gene names: 18976920

Gene position: 566642-566869 (Clockwise)

Preceding gene: 18976915

Following gene: 18976921

Centisome position: 29.69

GC content: 41.23

Gene sequence:

>228_bases
ATGTGCCTTGCAATCCCAGGGAAAGTGGTGGAGATTAAAGGTAACGTTGGAATAGTGGATTTTGGAGGAATACGGAGAGA
GGTAAGGTTAGATCTTTTGAGTGATGTTAAAGTTGGCGATTACGTTATAGTTCACACTGGCTTTGCTATAGAAAAGTTAG
ATGAGAGGAGAGCTAGAGAAATTCTTGAAGCCTGGGAAGAAGTTTTCTCAGTAATTGGGGGTGAGTAA

Upstream 100 bases:

>100_bases
TGTATTATTAAAGGGATTAAGAAAAGGGAAAAGGTTGAAAACTTCAAGTTTCAAAAACCCCTAAAAAGTCTAAATCAAAC
CCTCTAATGGTGGGAGTAAA

Downstream 100 bases:

>100_bases
ATGCTTGAAAAATTTGGAGACAAAGCTGTAGCTCAAAAGATTTTAGAAAAAATTAAAGAGGAAGCTAAAGGGATAGAAGA
GCTACGATTTATGCACGTTT

Product: hydrogenase expression/formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MCLAIPGKVVEIKGNVGIVDFGGIRREVRLDLLSDVKVGDYVIVHTGFAIEKLDERRAREILEAWEEVFSVIGGE

Sequences:

>Translated_75_residues
MCLAIPGKVVEIKGNVGIVDFGGIRREVRLDLLSDVKVGDYVIVHTGFAIEKLDERRAREILEAWEEVFSVIGGE
>Mature_75_residues
MCLAIPGKVVEIKGNVGIVDFGGIRREVRLDLLSDVKVGDYVIVHTGFAIEKLDERRAREILEAWEEVFSVIGGE

Specific function: Required for production of hydrogenase [H]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

Organism=Escherichia coli, GI1789083, Length=77, Percent_Identity=38.961038961039, Blast_Score=60, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 8327; Mature: 8327

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLAIPGKVVEIKGNVGIVDFGGIRREVRLDLLSDVKVGDYVIVHTGFAIEKLDERRARE
CEEECCCEEEEEECCEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
ILEAWEEVFSVIGGE
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MCLAIPGKVVEIKGNVGIVDFGGIRREVRLDLLSDVKVGDYVIVHTGFAIEKLDERRARE
CEEECCCEEEEEECCEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
ILEAWEEVFSVIGGE
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954 [H]