Click here to switch to the map view.

The map label for this gene is 18976903

Identifier: 18976903

GI number: 18976903

Start: 547053

End: 547667

Strand: Reverse

Name: 18976903

Synonym: PF0531

Alternate gene names: NA

Gene position: 547667-547053 (Counterclockwise)

Preceding gene: 18976907

Following gene: 18976902

Centisome position: 28.7

GC content: 44.07

Gene sequence:

>615_bases
GTGCATATCCCAGACGGCCTATTGAGCCCTCCAGTGATAGCCGCTACATATTTGGGTTTTATTGCCGTTCTAGCGTACTC
ACTTAGAAATCTAAAGGAGTTCCCAGAAGAGAAGATACCACTATTAGGACTTTTTGCAGCAGGAATCTTCGCAGCACAAA
TGGTCAACTTCCCCATAATTGGAGGAGTTAGTGGGCACTTACTGGGAGGAGCTTTGGTGGCGGTAATTTTAGGCCCACAT
GCCGCCTTCATTGTAATGACAACGGTTTTACTAATCCAAACATTCTTCTTTGGGGACGGAGGAATAACGGCACTTGGAGC
CAACATATTGAACATGGGAGCTGTGGGAGCGTATCTTGGCTACTATATCTACCAGAAAATTAGCAAAGTCAAAGAAGAGC
TCGGAATTGCACTTGCAGCCTGGCTATCAGTAGTGATAGGAGCAGCACTAACAGCAATTGAAATAGGAGTTAGTGGAAAT
GTGCCATTTACAAAAGTGTTCTCCCTTATGGTTGCTTATCATTCGATAATTGGAATTGGAGAAGCACTGATAACCCTGGC
CGTTATAAAAGCAGTGAAAGGTAAAGTAGCAAGTATTGGAGGTGTTCCAACATGA

Upstream 100 bases:

>100_bases
AATGAGCAAACCTTACGTTGGTAACAAAATGTTTAAAAAATATTTAAAAATCGTGCTACTATTTTTAACTTTGGTAACAC
AAATTAGGGAGGGATAAGAT

Downstream 100 bases:

>100_bases
AAAGACAAATAATCTTAGGATTTCTTGTTATTATTCTCGCACTAGCAATTACACTTCCCCTGGCTTCCTCGAATCCTGAC
GGGTTAGAAGCCACTATGGA

Product: cobalamin biosynthesis protein m

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MHIPDGLLSPPVIAATYLGFIAVLAYSLRNLKEFPEEKIPLLGLFAAGIFAAQMVNFPIIGGVSGHLLGGALVAVILGPH
AAFIVMTTVLLIQTFFFGDGGITALGANILNMGAVGAYLGYYIYQKISKVKEELGIALAAWLSVVIGAALTAIEIGVSGN
VPFTKVFSLMVAYHSIIGIGEALITLAVIKAVKGKVASIGGVPT

Sequences:

>Translated_204_residues
MHIPDGLLSPPVIAATYLGFIAVLAYSLRNLKEFPEEKIPLLGLFAAGIFAAQMVNFPIIGGVSGHLLGGALVAVILGPH
AAFIVMTTVLLIQTFFFGDGGITALGANILNMGAVGAYLGYYIYQKISKVKEELGIALAAWLSVVIGAALTAIEIGVSGN
VPFTKVFSLMVAYHSIIGIGEALITLAVIKAVKGKVASIGGVPT
>Mature_204_residues
MHIPDGLLSPPVIAATYLGFIAVLAYSLRNLKEFPEEKIPLLGLFAAGIFAAQMVNFPIIGGVSGHLLGGALVAVILGPH
AAFIVMTTVLLIQTFFFGDGGITALGANILNMGAVGAYLGYYIYQKISKVKEELGIALAAWLSVVIGAALTAIEIGVSGN
VPFTKVFSLMVAYHSIIGIGEALITLAVIKAVKGKVASIGGVPT

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 21067; Mature: 21067

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIPDGLLSPPVIAATYLGFIAVLAYSLRNLKEFPEEKIPLLGLFAAGIFAAQMVNFPII
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCC
GGVSGHLLGGALVAVILGPHAAFIVMTTVLLIQTFFFGDGGITALGANILNMGAVGAYLG
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
YYIYQKISKVKEELGIALAAWLSVVIGAALTAIEIGVSGNVPFTKVFSLMVAYHSIIGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
EALITLAVIKAVKGKVASIGGVPT
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHIPDGLLSPPVIAATYLGFIAVLAYSLRNLKEFPEEKIPLLGLFAAGIFAAQMVNFPII
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCC
GGVSGHLLGGALVAVILGPHAAFIVMTTVLLIQTFFFGDGGITALGANILNMGAVGAYLG
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
YYIYQKISKVKEELGIALAAWLSVVIGAALTAIEIGVSGNVPFTKVFSLMVAYHSIIGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
EALITLAVIKAVKGKVASIGGVPT
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]