| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18976437
Identifier: 18976437
GI number: 18976437
Start: 70838
End: 71470
Strand: Direct
Name: 18976437
Synonym: PF0065
Alternate gene names: NA
Gene position: 70838-71470 (Clockwise)
Preceding gene: 18976429
Following gene: 18976442
Centisome position: 3.71
GC content: 40.44
Gene sequence:
>633_bases ATGTTTAGAAAGATAAGTGCGGAGAAAACCTTAAACGTCTTTGGACCTTTATCCACTATACTTGGGGAATTAAGGGAGGG AGACTGGGCTGGGGTAATTGCCACTGACCAAATTGCCTATTCTTATGTCCTTTACACTTCTCTCTCTTCCTCAGAGCTTA GCTATTATGTGGATATCTCCTCTAGGTTTTCTCCGGAGTTGATAAATAAGGAAGTGTTCTTTGCAAAAGCGTTTTCACTT TCTGAAATTCTTGATGCAACGAAGGAAATTAACGATGGCTCTCTCCTAGTTATTGGCTCATTCCAAGCGCTAAAGAAGGA GGTTGAAGAAATCCTCGAGCTTAAGAGAATAACAGATGAAAAAGGGATACACACACTTATTTTGGTTGAAGAACCGTTAC TAAACGAACTAAACCGACTGGAGGAAAGCAGAAGACTTCTATTGATTCCAGAAGCCTTTGAACAGCTGTTCATTCTTAGA ACTAGCTATTACAGGGGGAGATACAAGTTCTCACTGAGCGTGTTGAGAAACTATTCCGATAGGCTCTCTACCCTGGGAGA TCATGAAGTAAATGTTGATGAGGAGATTAGAAGAATTTTAAGCCCAGGTAAAGGGCAAGAGCAAGAAAAATAA
Upstream 100 bases:
>100_bases CTCAAGTATAGAACTAAAATTTAAATATTGTGTTCCAAAAATAAGACAGAAACTAAATGCAGAGCAAAGGTATAAATACT CCAAAATCATAAATTCAACG
Downstream 100 bases:
>100_bases TCCCTAGGGCTAGGTAATCTATAGGCGTCATTTTTAGTTCAATCAAATAAGTTCTCTTTCTTGAAGCTCCAAATCCCCTA CTCTCCATTGCTATGGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MFRKISAEKTLNVFGPLSTILGELREGDWAGVIATDQIAYSYVLYTSLSSSELSYYVDISSRFSPELINKEVFFAKAFSL SEILDATKEINDGSLLVIGSFQALKKEVEEILELKRITDEKGIHTLILVEEPLLNELNRLEESRRLLLIPEAFEQLFILR TSYYRGRYKFSLSVLRNYSDRLSTLGDHEVNVDEEIRRILSPGKGQEQEK
Sequences:
>Translated_210_residues MFRKISAEKTLNVFGPLSTILGELREGDWAGVIATDQIAYSYVLYTSLSSSELSYYVDISSRFSPELINKEVFFAKAFSL SEILDATKEINDGSLLVIGSFQALKKEVEEILELKRITDEKGIHTLILVEEPLLNELNRLEESRRLLLIPEAFEQLFILR TSYYRGRYKFSLSVLRNYSDRLSTLGDHEVNVDEEIRRILSPGKGQEQEK >Mature_210_residues MFRKISAEKTLNVFGPLSTILGELREGDWAGVIATDQIAYSYVLYTSLSSSELSYYVDISSRFSPELINKEVFFAKAFSL SEILDATKEINDGSLLVIGSFQALKKEVEEILELKRITDEKGIHTLILVEEPLLNELNRLEESRRLLLIPEAFEQLFILR TSYYRGRYKFSLSVLRNYSDRLSTLGDHEVNVDEEIRRILSPGKGQEQEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24079; Mature: 24079
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRKISAEKTLNVFGPLSTILGELREGDWAGVIATDQIAYSYVLYTSLSSSELSYYVDIS CCCCCCCHHHHHHHCCHHHHHHHHCCCCCCEEEEHHHHHHHHHEEEECCCCCEEEEEEEC SRFSPELINKEVFFAKAFSLSEILDATKEINDGSLLVIGSFQALKKEVEEILELKRITDE CCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCC KGIHTLILVEEPLLNELNRLEESRRLLLIPEAFEQLFILRTSYYRGRYKFSLSVLRNYSD CCCEEEEEECCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHH RLSTLGDHEVNVDEEIRRILSPGKGQEQEK HHHHCCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFRKISAEKTLNVFGPLSTILGELREGDWAGVIATDQIAYSYVLYTSLSSSELSYYVDIS CCCCCCCHHHHHHHCCHHHHHHHHCCCCCCEEEEHHHHHHHHHEEEECCCCCEEEEEEEC SRFSPELINKEVFFAKAFSLSEILDATKEINDGSLLVIGSFQALKKEVEEILELKRITDE CCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCC KGIHTLILVEEPLLNELNRLEESRRLLLIPEAFEQLFILRTSYYRGRYKFSLSVLRNYSD CCCEEEEEECCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHH RLSTLGDHEVNVDEEIRRILSPGKGQEQEK HHHHCCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA