| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
Click here to switch to the map view.
The map label for this gene is 18976379
Identifier: 18976379
GI number: 18976379
Start: 6464
End: 7951
Strand: Direct
Name: 18976379
Synonym: PF0007
Alternate gene names: NA
Gene position: 6464-7951 (Clockwise)
Preceding gene: 18976378
Following gene: 18976380
Centisome position: 0.34
GC content: 45.43
Gene sequence:
>1488_bases ATGTTCGTAAATAGAAGGGCGGAATTGAAGATACTACACTCCGCTTACGAGTCGTTAAAAAGAGGAGAAAAGGTTAACGT TGCAATTATTGGGCCGAGGAGAATCGGAAAGACGGAGCTCCTTCTAAAATTCAAGGAGGAAGTCAATGGAGTGGTTCCAT ACTTGAACCTACAACGCATCGGGAGCTTAGAGTCTTTTATCTTTGCATACACGAGGGAACTTCTCTACGAGATCGCCAAA GTTGTGGGAATGAGCATTGAGAGGAGTGACCTCTTAACGTGGGACGATCTACTAATCCTTTCGGCAAAGCTTGACCTTGA AAGAGAGGTTAAGGCCATCAGAGATGGAACTCTTGAGACCCTCTTTGAAATGCAGGAGGCAATTTTAGAGAAAACGGGGC AAAAGGCCGTTTTCATATTGGACGAGTTCCAGGAAGTCGTTAACTTCAAAGGCTTCCTAGAGACGATGCGTGCTGTCACG GAAAAGCAGAGAAACATTGCGTACTTTATTTCTGGTTCTGCCGTGAGGATGATGGAAGAAATCTTAGCTCCAAAGAATCC TTTCTTTGGCCAGTTTAAGCGAGTTTATCTCAGAGGATTGCCAAAAGAGGACACAATAGAACTCGCAAAGACAACGTTGG AGAGGGCAGGAATAGAGGCAACTCACTCGGCGCTTGAGTTGATATATAAACTCACTCAGGGGCATCCATTCTATGTTTTG GCCCTCTGTAGGCGTCTAATTGAAGAGGGATTTGAGAAAGTTAAGAGTAGAGATGTTTACTATGCCTTTCTCACCGAACT CTTGAGCGAGAAGGGTGACATCTACATGCACCTTGAGTATCTCTTCAACGAGTCACTATCGAGGGCCTATAAAGGGCCGA TACACAAGCAAATTCTACTCATACTGGCTCAAGAGGAAGGTCTAAGGCTCTCAGAAATCGCAAGACGCTTGAACAAGCCC AGCGGTGAGGTGTCGAACTATCTAAAGTTCCTTCTGAGGACGGATCTAATATTAAAGCAGGGGGAGAGGTATTACTTCAC CGATAAGCTCATGCGTTTTTGGCTTGCAAAGACCTACCTTGGCATCACCGAGCTTGAGCTTAGGCGGGAGAGATTCTTGG AAGAGTTAGTTAGGGAGCTTGAAGAGAAGTACCTCAAGGCGAAGAAAGAGCTTGGAATTGCAAAGGAAGCAATGATCAGG GAGAGGATGAGGGAAATTTTTGACATAGATTTCAAGCCCTATAGGAGGGGCGATGTCGAGTTTGATGGCGTCGCCTTTAG AGATGGGGTCTACGTGCTCGAGATCAAGTGGAGGAACAGACCTGCAACTTATAAAGATGTGAAGGATTTCATCAGGAAAG TCAAAGGTGAGTTTGGATCTGCGACGATGTTCTTCTTCTCAAGATCTGGCTTCACCGAGAAGGCTAAAGAGCTATGTGAG AAGGAAGGGGTTAAGATGCTTACGCCTAAAGACTTGGGAATTTCATGA
Upstream 100 bases:
>100_bases TTTGCGGGCACTCTTTAAGCTCCCTTTACTTCATATAGCCACAAAATCTATTAAACTCTAATGCATTACAGTTTTATGCA TAAAACTATAAGGTGGTATC
Downstream 100 bases:
>100_bases GAAATAAGAATCGAAAGGCGTAAATAAATGCAAGGAGCTGTATCGAGAAGCATGCCTAAATCCTTTTAAAAATAAATAAT ATTCCTAAAATCGGGTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Prokaryotic ATPase AAA Superfamily
Number of amino acids: Translated: 495; Mature: 495
Protein sequence:
>495_residues MFVNRRAELKILHSAYESLKRGEKVNVAIIGPRRIGKTELLLKFKEEVNGVVPYLNLQRIGSLESFIFAYTRELLYEIAK VVGMSIERSDLLTWDDLLILSAKLDLEREVKAIRDGTLETLFEMQEAILEKTGQKAVFILDEFQEVVNFKGFLETMRAVT EKQRNIAYFISGSAVRMMEEILAPKNPFFGQFKRVYLRGLPKEDTIELAKTTLERAGIEATHSALELIYKLTQGHPFYVL ALCRRLIEEGFEKVKSRDVYYAFLTELLSEKGDIYMHLEYLFNESLSRAYKGPIHKQILLILAQEEGLRLSEIARRLNKP SGEVSNYLKFLLRTDLILKQGERYYFTDKLMRFWLAKTYLGITELELRRERFLEELVRELEEKYLKAKKELGIAKEAMIR ERMREIFDIDFKPYRRGDVEFDGVAFRDGVYVLEIKWRNRPATYKDVKDFIRKVKGEFGSATMFFFSRSGFTEKAKELCE KEGVKMLTPKDLGIS
Sequences:
>Translated_495_residues MFVNRRAELKILHSAYESLKRGEKVNVAIIGPRRIGKTELLLKFKEEVNGVVPYLNLQRIGSLESFIFAYTRELLYEIAK VVGMSIERSDLLTWDDLLILSAKLDLEREVKAIRDGTLETLFEMQEAILEKTGQKAVFILDEFQEVVNFKGFLETMRAVT EKQRNIAYFISGSAVRMMEEILAPKNPFFGQFKRVYLRGLPKEDTIELAKTTLERAGIEATHSALELIYKLTQGHPFYVL ALCRRLIEEGFEKVKSRDVYYAFLTELLSEKGDIYMHLEYLFNESLSRAYKGPIHKQILLILAQEEGLRLSEIARRLNKP SGEVSNYLKFLLRTDLILKQGERYYFTDKLMRFWLAKTYLGITELELRRERFLEELVRELEEKYLKAKKELGIAKEAMIR ERMREIFDIDFKPYRRGDVEFDGVAFRDGVYVLEIKWRNRPATYKDVKDFIRKVKGEFGSATMFFFSRSGFTEKAKELCE KEGVKMLTPKDLGIS >Mature_495_residues MFVNRRAELKILHSAYESLKRGEKVNVAIIGPRRIGKTELLLKFKEEVNGVVPYLNLQRIGSLESFIFAYTRELLYEIAK VVGMSIERSDLLTWDDLLILSAKLDLEREVKAIRDGTLETLFEMQEAILEKTGQKAVFILDEFQEVVNFKGFLETMRAVT EKQRNIAYFISGSAVRMMEEILAPKNPFFGQFKRVYLRGLPKEDTIELAKTTLERAGIEATHSALELIYKLTQGHPFYVL ALCRRLIEEGFEKVKSRDVYYAFLTELLSEKGDIYMHLEYLFNESLSRAYKGPIHKQILLILAQEEGLRLSEIARRLNKP SGEVSNYLKFLLRTDLILKQGERYYFTDKLMRFWLAKTYLGITELELRRERFLEELVRELEEKYLKAKKELGIAKEAMIR ERMREIFDIDFKPYRRGDVEFDGVAFRDGVYVLEIKWRNRPATYKDVKDFIRKVKGEFGSATMFFFSRSGFTEKAKELCE KEGVKMLTPKDLGIS
Specific function: Unknown
COG id: COG1672
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57863; Mature: 57863
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVNRRAELKILHSAYESLKRGEKVNVAIIGPRRIGKTELLLKFKEEVNGVVPYLNLQRI CCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHH GSLESFIFAYTRELLYEIAKVVGMSIERSDLLTWDDLLILSAKLDLEREVKAIRDGTLET CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHH LFEMQEAILEKTGQKAVFILDEFQEVVNFKGFLETMRAVTEKQRNIAYFISGSAVRMMEE HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHH ILAPKNPFFGQFKRVYLRGLPKEDTIELAKTTLERAGIEATHSALELIYKLTQGHPFYVL HHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH ALCRRLIEEGFEKVKSRDVYYAFLTELLSEKGDIYMHLEYLFNESLSRAYKGPIHKQILL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHH ILAQEEGLRLSEIARRLNKPSGEVSNYLKFLLRTDLILKQGERYYFTDKLMRFWLAKTYL EEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHC GITELELRRERFLEELVRELEEKYLKAKKELGIAKEAMIRERMREIFDIDFKPYRRGDVE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCC FDGVAFRDGVYVLEIKWRNRPATYKDVKDFIRKVKGEFGSATMFFFSRSGFTEKAKELCE CCCEEEECCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHH KEGVKMLTPKDLGIS HCCCEEECCCCCCCC >Mature Secondary Structure MFVNRRAELKILHSAYESLKRGEKVNVAIIGPRRIGKTELLLKFKEEVNGVVPYLNLQRI CCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHH GSLESFIFAYTRELLYEIAKVVGMSIERSDLLTWDDLLILSAKLDLEREVKAIRDGTLET CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHH LFEMQEAILEKTGQKAVFILDEFQEVVNFKGFLETMRAVTEKQRNIAYFISGSAVRMMEE HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHH ILAPKNPFFGQFKRVYLRGLPKEDTIELAKTTLERAGIEATHSALELIYKLTQGHPFYVL HHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH ALCRRLIEEGFEKVKSRDVYYAFLTELLSEKGDIYMHLEYLFNESLSRAYKGPIHKQILL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHH ILAQEEGLRLSEIARRLNKPSGEVSNYLKFLLRTDLILKQGERYYFTDKLMRFWLAKTYL EEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHC GITELELRRERFLEELVRELEEKYLKAKKELGIAKEAMIRERMREIFDIDFKPYRRGDVE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCC FDGVAFRDGVYVLEIKWRNRPATYKDVKDFIRKVKGEFGSATMFFFSRSGFTEKAKELCE CCCEEEECCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHH KEGVKMLTPKDLGIS HCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA