Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 189500378

GI number:

Start: 1563403

End: 1564851

Strand: Reverse

Name: Not Available

Synonym: Cphamn1_1440

Alternate gene names: NA

Gene position: NA

Preceding gene: 189500379

Following gene: 189500377

Centisome position: NA

GC content: NA

Gene sequence:

>1449_bases
ATGCCAGATATTAAGCTACGGCAGAGTCAGCGACAACAGCTCTCTTCCCAGCAGATTATTACAAGTCAGCTGCTTCAGCT
TCCGTTATTGCATCTTGAACAGCGGATCTATGATGAGCTGCAGGAAAATCCCATGCTCGAACTTGAAGAAGAGAAGACTG
ACAGTGTTGACGATTCAGCTGGAAATGACGACGACGGGGAAGAGGACCTGTTCGGTTCAGTTGATCGGTTTGAGGCTGAA
ACGACAGGTATGACGGATAAGGCTGAGAGAAAAAAGGACGACGCTGAAGGGGTGATGCAGTTCACCATTGATAATCGTCC
GAAAGAGAACTTTTTTCAGGCAGTGCACCATGATTCCTTCGAGGAAAAGCTGCTGAAAGATTTTTCCCTGCAAGGCAACG
TAAGTCCGGGTGAACTGCTGATTGCATCTGAAATTCTCGGAAATCTGGATGAAGACGGCTATTTGAAGGATGATCTCTCT
GTTATTGTTGACGGTCTTGCGCGTAACGGGATAGCGGTTACTGAAAAAGAGGTGCAGAGCGTGATTAAAAAAATCAACGT
GCTCGAGCCTCCAGGAATTGCCGTTCACGGTCTTCGGGAAAGACTGCTCATTCAGATAGAATACAAGGGAACTCGTAACC
GAACAGCTTCCGAGTCTATTGCAGTAGGGATTCTCAAGGATCATTACGAGGATATGCTCAACAACCGATACGAGCGTATT
CTCAAGAAGATGCAGATCACCCTGATTGAGCTGGAGTCGGCTATTGCAGTCATCACGAAACTTGATCCGCATCCTTTCGC
GTCCGGTGTGAGCAGCGCCGAGTACATTGTTCCCGACTTTATCGTCACCTATGAAGACGGACGCCTTACAGCGGTTCTGA
ATGACCGGAGCAATATGACTGTTCATGTTTCAAGAGCGTATCAGGAGGTGGTAAGGAATAAGTCAGTTGCTTCAGATGAC
AGGAAGTACATGCGGCAGAAACTCAATCGGGCAAAAGAGTTTGCCAGTGCTATTGCCATGCGCAGGAATACCCTTATAAA
AGTCATTGAGGCACTGATGAATTTTCAGTATGACTTTTTTGTTTCCGGTCCTGATAAGCTTCGGCCTCTTATCATGAAAG
AGATAGCTGAAAAAACGGGATTTGATCTTTCTACAATAAGCAGAGCGGTCAACGGAAAATACGTCCAGACCCGATTTGGT
ACTTTCGAACTTAAATACTTTTTCAGCGGGAGTCTCCCTACGGAAGATGGCGAAGATCTCTCAACCAAGATCATCAAGCA
GTATATACGGGAGATGATACAAACCGAAGATGCGACCAGACCGGTAAACGATGATCTGCTTACAAAAATGCTGGATGAAA
AAGGAATCAGGATTGCCCGGAGAACGGTTGCAAAATATCGCGAACAAATGCAAATTCCAGTAGCAAGATTAAGAAAGAAA
ATATTTTAA

Upstream 100 bases:

>100_bases
ATGCCGCTTGTTGATTTCCTTGGTGACGCGTTGATTGAACGGTACGGTTTATCCTGGTACACCCGCTTAAAAGATTTGTT
AGCGAATTCTCCCATACACT

Downstream 100 bases:

>100_bases
TGACCTGAGGCGACCGATAGTTTGGTGCTCGATAAGCGACCCGGTTAATCAGGTAACAAGTTTCACAGAGGAGTAGTGAT
AATGGAGAGGTATGGAAAGC

Product: RNA polymerase, sigma 54 subunit, RpoN

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>482_residues
MPDIKLRQSQRQQLSSQQIITSQLLQLPLLHLEQRIYDELQENPMLELEEEKTDSVDDSAGNDDDGEEDLFGSVDRFEAE
TTGMTDKAERKKDDAEGVMQFTIDNRPKENFFQAVHHDSFEEKLLKDFSLQGNVSPGELLIASEILGNLDEDGYLKDDLS
VIVDGLARNGIAVTEKEVQSVIKKINVLEPPGIAVHGLRERLLIQIEYKGTRNRTASESIAVGILKDHYEDMLNNRYERI
LKKMQITLIELESAIAVITKLDPHPFASGVSSAEYIVPDFIVTYEDGRLTAVLNDRSNMTVHVSRAYQEVVRNKSVASDD
RKYMRQKLNRAKEFASAIAMRRNTLIKVIEALMNFQYDFFVSGPDKLRPLIMKEIAEKTGFDLSTISRAVNGKYVQTRFG
TFELKYFFSGSLPTEDGEDLSTKIIKQYIREMIQTEDATRPVNDDLLTKMLDEKGIRIARRTVAKYREQMQIPVARLRKK
IF

Sequences:
NA

Specific function: NA

COG id: COG1508

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA