| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424604
Identifier: 189424604
GI number: 189424604
Start: 1632081
End: 1632968
Strand: Reverse
Name: 189424604
Synonym: Glov_1545
Alternate gene names: NA
Gene position: 1632968-1632081 (Counterclockwise)
Preceding gene: 189424638
Following gene: 189424603
Centisome position: 41.68
GC content: 53.6
Gene sequence:
>888_bases ATGAGCAGCATCAGTAGTATCAGCAGCAGCATAAGCAGCATGTACAGCATTGAGCAGCAGAAGAGAAAACAGGATCTCTT CAGCAAAGTTGACAGCGACGGCAACGGCGGCATTTCACAGACTGAATTAACGGCTCTGACAGACAAGATCTCTCAGGACA GCGGCAAAACACTGGATGCCTCATCACTGCTCTCTCAGTACGACAGCAACAGCGACGGTTCTCTGGGCGAAGACGAAATG AACAGTCTGATGGAAAGCATCAAGCCGAAGCATGAGCGTGATGCCATGATGAGCAATGAAGAAGAGTCCAGCAGTCAGTC CAGCGGGCTTGACACCACTTCGCTGGCCTCGTACCTGTCAAACTCCGGTCAGGATCTGGTTTCAAGCCTGATCAGCATGC TGCAGCAGATGCAAAGTTCATCATCAGAGAGTGAAGACAGCTCAACCGGCAGCAGTTCGGCCATAGGCGGCAAGCAAGGG CCGCCTCCGCCACCGCCAAGTCCGGAAGAGATGTTCAAGAAAGTGGATAGTGACAGCAGCGGCGCCGTTTCATCTGACGA ACTGCAGACCATGCTGGATAAAATGGCAGAGATGACCGGTCAGTCACAGGACGCCTCTGCATTGATTACCCAGTATGACA GCGACAGCGACGGTTCTCTCAACAGCGATGAGATGGACAGCATGATGAAGAGCATGGGACCGCCACCGCCGCCACCACAG ATGGCCAAGACCGATGACAGCTCTGATCAGGACAGCAGCTCTCAGCAGGACGCCCTGGCCTCGTTTCTCCAGAATGTCGA CCAGAACAGCCTTGCCGCCCTGTTGAAAATGCTGAAGAACAGTTCAAGTTCCAGCAGTAGCACGCAATCAGTGAACGTGC TTTCCTGA
Upstream 100 bases:
>100_bases TTACCCAATCAGCTGCTCACTTAACGAAGAGCAGGGCCCCTCCAGCCGATACGTTCAAGTAACAGGTTCACTATCCACGC CGAATCAAAGGAGGCCCGCC
Downstream 100 bases:
>100_bases TACCGCAGCCAGGCCGTACTTTACCATTTGCGTACATCTCTTTACCACCGGGGTACGTCCAGTTTTGTTAGACTTTTAAC AACGTTGGCTGACATCACGC
Product: Calcium-binding EF-hand-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSSISSISSSISSMYSIEQQKRKQDLFSKVDSDGNGGISQTELTALTDKISQDSGKTLDASSLLSQYDSNSDGSLGEDEM NSLMESIKPKHERDAMMSNEEESSSQSSGLDTTSLASYLSNSGQDLVSSLISMLQQMQSSSSESEDSSTGSSSAIGGKQG PPPPPPSPEEMFKKVDSDSSGAVSSDELQTMLDKMAEMTGQSQDASALITQYDSDSDGSLNSDEMDSMMKSMGPPPPPPQ MAKTDDSSDQDSSSQQDALASFLQNVDQNSLAALLKMLKNSSSSSSSTQSVNVLS
Sequences:
>Translated_295_residues MSSISSISSSISSMYSIEQQKRKQDLFSKVDSDGNGGISQTELTALTDKISQDSGKTLDASSLLSQYDSNSDGSLGEDEM NSLMESIKPKHERDAMMSNEEESSSQSSGLDTTSLASYLSNSGQDLVSSLISMLQQMQSSSSESEDSSTGSSSAIGGKQG PPPPPPSPEEMFKKVDSDSSGAVSSDELQTMLDKMAEMTGQSQDASALITQYDSDSDGSLNSDEMDSMMKSMGPPPPPPQ MAKTDDSSDQDSSSQQDALASFLQNVDQNSLAALLKMLKNSSSSSSSTQSVNVLS >Mature_294_residues SSISSISSSISSMYSIEQQKRKQDLFSKVDSDGNGGISQTELTALTDKISQDSGKTLDASSLLSQYDSNSDGSLGEDEMN SLMESIKPKHERDAMMSNEEESSSQSSGLDTTSLASYLSNSGQDLVSSLISMLQQMQSSSSESEDSSTGSSSAIGGKQGP PPPPPSPEEMFKKVDSDSSGAVSSDELQTMLDKMAEMTGQSQDASALITQYDSDSDGSLNSDEMDSMMKSMGPPPPPPQM AKTDDSSDQDSSSQQDALASFLQNVDQNSLAALLKMLKNSSSSSSSTQSVNVLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31091; Mature: 30960
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSISSISSSISSMYSIEQQKRKQDLFSKVDSDGNGGISQTELTALTDKISQDSGKTLDA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH SSLLSQYDSNSDGSLGEDEMNSLMESIKPKHERDAMMSNEEESSSQSSGLDTTSLASYLS HHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHH NSGQDLVSSLISMLQQMQSSSSESEDSSTGSSSAIGGKQGPPPPPPSPEEMFKKVDSDSS CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC GAVSSDELQTMLDKMAEMTGQSQDASALITQYDSDSDGSLNSDEMDSMMKSMGPPPPPPQ CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCC MAKTDDSSDQDSSSQQDALASFLQNVDQNSLAALLKMLKNSSSSSSSTQSVNVLS CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SSISSISSSISSMYSIEQQKRKQDLFSKVDSDGNGGISQTELTALTDKISQDSGKTLDA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH SSLLSQYDSNSDGSLGEDEMNSLMESIKPKHERDAMMSNEEESSSQSSGLDTTSLASYLS HHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHH NSGQDLVSSLISMLQQMQSSSSESEDSSTGSSSAIGGKQGPPPPPPSPEEMFKKVDSDSS CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC GAVSSDELQTMLDKMAEMTGQSQDASALITQYDSDSDGSLNSDEMDSMMKSMGPPPPPPQ CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCC MAKTDDSSDQDSSSQQDALASFLQNVDQNSLAALLKMLKNSSSSSSSTQSVNVLS CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA