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The map label for this gene is wcaL [C]

Identifier: 189424557

GI number: 189424557

Start: 1564452

End: 1565576

Strand: Reverse

Name: wcaL [C]

Synonym: Glov_1496

Alternate gene names: 189424557

Gene position: 1565576-1564452 (Counterclockwise)

Preceding gene: 189424559

Following gene: 189424556

Centisome position: 39.96

GC content: 30.31

Gene sequence:

>1125_bases
ATGCATGTGCTCATAATACCATATGCTTATCCAACCAAACATTTTTTGTACAATGCAATTTTTATTAAGGAGCAAGTGTT
TGCACTAAGGCAGTCCATTCCCAAAGTTGGCGTTTTGGGTGCAATTCCAAAGACATTTAATATGTGCTTCAAATCAAAAA
ATTTTAAATTTGGTCAAATTGAAGAGGAAGACTGGGTTTACGAAGTTCCCGCAATAAGGTGGTTATTGAAAATAAATAAA
TTTATTGTACTTAATGCCAGCAAAATACTTTTTTTAAAATATATAAAAGTTAATGGATTACCAGATATAATACATGTGCA
TAACGTAAATGCTGCAGATATTGCTGTCTGGATAAAAGAAAATTTCAAAATTAAGTTCGTTATAACAGAGCATTCAAGTG
TTATGTGGAATTTAATGGATATGAAAACATCAGAATTTGACAGGTTGAAGCGAATTTATTCTCAGAGCAGTGTTAATATA
GCTGTTAGTAAAGCGCTTGCTGATAAACTGTCGAATGTTTTAAATCTTCCATTTTATTATATACCAAATTTAGTTAATAC
TGATTTTTTTAACATAAATGATTCAAATAAAAAAAATTTTGTAACAAAACTAGTATCTATTGGTAATTTAACAATCAACA
AGAATCATTTAACACTTATAAAAGCCGTGCATAAATTATATATAAATGGCTACAACGTAAAACTCTCTATTGCTGGCGAC
GGAAAAGAAAAAGATAAATTGCTTGAATATATTCATTATAACAATTTACAAAGTGTTGTCGTTTTGTTAGGGGAACTATC
GAGATTAGAAATCAAAAAGTTGTTAGAAGATTCAGATTATTTTATTTTACCAAGCATTCAAGAGACGTTTGGCGTTGTTT
TAATCGAAGCCATGGCTTGTGGGTTACCTGCATTAGCTTTTAAGGCCGGAGGACCCGAGTCAATAATTACTAGCAATAAA
TTAGGTCTACTTTTAGACAGTGGTGGTGATTTATACGAAGGATTAGTAAACCTACTAAAATCAAATTATAATCCATTTGA
GATTCGTGAATACGCTGTTCTTAATTTTTCTTATTCTGCCGTAGAAAAGAAATTGAATGACGTGTATATCAATTTAATCA
AATGA

Upstream 100 bases:

>100_bases
GTTACAACTGTACAATCAAAATTTACCGGACAGTAGTGATTTCATATATAAAAAAGACTAACACTCAAAATATTGCGCAA
CAGCCTGAGGCAACTATATT

Downstream 100 bases:

>100_bases
CTACTTCAGATTTATATAAATATAGTACATTCACAATACTATTTATGCTCTTATTAACACCAACTTTTTACGCCCCAGGT
GTTATAGGTATAAGGCTAGA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MHVLIIPYAYPTKHFLYNAIFIKEQVFALRQSIPKVGVLGAIPKTFNMCFKSKNFKFGQIEEEDWVYEVPAIRWLLKINK
FIVLNASKILFLKYIKVNGLPDIIHVHNVNAADIAVWIKENFKIKFVITEHSSVMWNLMDMKTSEFDRLKRIYSQSSVNI
AVSKALADKLSNVLNLPFYYIPNLVNTDFFNINDSNKKNFVTKLVSIGNLTINKNHLTLIKAVHKLYINGYNVKLSIAGD
GKEKDKLLEYIHYNNLQSVVVLLGELSRLEIKKLLEDSDYFILPSIQETFGVVLIEAMACGLPALAFKAGGPESIITSNK
LGLLLDSGGDLYEGLVNLLKSNYNPFEIREYAVLNFSYSAVEKKLNDVYINLIK

Sequences:

>Translated_374_residues
MHVLIIPYAYPTKHFLYNAIFIKEQVFALRQSIPKVGVLGAIPKTFNMCFKSKNFKFGQIEEEDWVYEVPAIRWLLKINK
FIVLNASKILFLKYIKVNGLPDIIHVHNVNAADIAVWIKENFKIKFVITEHSSVMWNLMDMKTSEFDRLKRIYSQSSVNI
AVSKALADKLSNVLNLPFYYIPNLVNTDFFNINDSNKKNFVTKLVSIGNLTINKNHLTLIKAVHKLYINGYNVKLSIAGD
GKEKDKLLEYIHYNNLQSVVVLLGELSRLEIKKLLEDSDYFILPSIQETFGVVLIEAMACGLPALAFKAGGPESIITSNK
LGLLLDSGGDLYEGLVNLLKSNYNPFEIREYAVLNFSYSAVEKKLNDVYINLIK
>Mature_374_residues
MHVLIIPYAYPTKHFLYNAIFIKEQVFALRQSIPKVGVLGAIPKTFNMCFKSKNFKFGQIEEEDWVYEVPAIRWLLKINK
FIVLNASKILFLKYIKVNGLPDIIHVHNVNAADIAVWIKENFKIKFVITEHSSVMWNLMDMKTSEFDRLKRIYSQSSVNI
AVSKALADKLSNVLNLPFYYIPNLVNTDFFNINDSNKKNFVTKLVSIGNLTINKNHLTLIKAVHKLYINGYNVKLSIAGD
GKEKDKLLEYIHYNNLQSVVVLLGELSRLEIKKLLEDSDYFILPSIQETFGVVLIEAMACGLPALAFKAGGPESIITSNK
LGLLLDSGGDLYEGLVNLLKSNYNPFEIREYAVLNFSYSAVEKKLNDVYINLIK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=220, Percent_Identity=27.7272727272727, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI9755344, Length=292, Percent_Identity=23.2876712328767, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42612; Mature: 42612

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVLIIPYAYPTKHFLYNAIFIKEQVFALRQSIPKVGVLGAIPKTFNMCFKSKNFKFGQI
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHCCCCCCCCCC
EEEDWVYEVPAIRWLLKINKFIVLNASKILFLKYIKVNGLPDIIHVHNVNAADIAVWIKE
CCCCCEEEHHHHHHHHHHCEEEEEECCEEEEEEEEEECCCCCEEEEECCCCCEEEEEEEC
NFKIKFVITEHSSVMWNLMDMKTSEFDRLKRIYSQSSVNIAVSKALADKLSNVLNLPFYY
CCEEEEEEEECCCEEEEHHHCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCHHC
IPNLVNTDFFNINDSNKKNFVTKLVSIGNLTINKNHLTLIKAVHKLYINGYNVKLSIAGD
CCCCCCCCEEECCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHHEECCEEEEEEEECC
GKEKDKLLEYIHYNNLQSVVVLLGELSRLEIKKLLEDSDYFILPSIQETFGVVLIEAMAC
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHC
GLPALAFKAGGPESIITSNKLGLLLDSGGDLYEGLVNLLKSNYNPFEIREYAVLNFSYSA
CCCCEEECCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEECCHHH
VEKKLNDVYINLIK
HHHHHHHEEEEEEC
>Mature Secondary Structure
MHVLIIPYAYPTKHFLYNAIFIKEQVFALRQSIPKVGVLGAIPKTFNMCFKSKNFKFGQI
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHCCCCCCCCCC
EEEDWVYEVPAIRWLLKINKFIVLNASKILFLKYIKVNGLPDIIHVHNVNAADIAVWIKE
CCCCCEEEHHHHHHHHHHCEEEEEECCEEEEEEEEEECCCCCEEEEECCCCCEEEEEEEC
NFKIKFVITEHSSVMWNLMDMKTSEFDRLKRIYSQSSVNIAVSKALADKLSNVLNLPFYY
CCEEEEEEEECCCEEEEHHHCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCHHC
IPNLVNTDFFNINDSNKKNFVTKLVSIGNLTINKNHLTLIKAVHKLYINGYNVKLSIAGD
CCCCCCCCEEECCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHHEECCEEEEEEEECC
GKEKDKLLEYIHYNNLQSVVVLLGELSRLEIKKLLEDSDYFILPSIQETFGVVLIEAMAC
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHC
GLPALAFKAGGPESIITSNKLGLLLDSGGDLYEGLVNLLKSNYNPFEIREYAVLNFSYSA
CCCCEEECCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEECCHHH
VEKKLNDVYINLIK
HHHHHHHEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]