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The map label for this gene is spsC [H]

Identifier: 189424550

GI number: 189424550

Start: 1557384

End: 1558535

Strand: Reverse

Name: spsC [H]

Synonym: Glov_1489

Alternate gene names: 189424550

Gene position: 1558535-1557384 (Counterclockwise)

Preceding gene: 189424551

Following gene: 189424549

Centisome position: 39.78

GC content: 53.47

Gene sequence:

>1152_bases
ATGAATACATTTCTCCCCTTTGCTCTCCCTGATATCGGCGAGGAAGAAATTAACGAAGCCCTTGATTCGCTTCGCTCCGG
CTGGCTGACGACCGGCCCCAAGACAAAGCGCTTTGAAGAAGAGTTTGCAGCTTTTGTGGGCAACGGGGTAGAGGCGATTG
CGGTCAACTCGGCCACTGCCGGTCTGCATCTGGCGCTGGAAGCGGTTGGTATTGGGCCCGGGGATGAGGTAATCACCACC
CCCTACACCTTTACTTCCACGGCAGAGGTTATCCGCTATCTGGGTGCTGACCCGGTGTTTGTGGATAGTGATCCGAACAC
GTATAACATCGATCCGACCAAGATCGAGGCAGCTATTACACCCCGCACCAAGGCGATTGTCCCGGTGCATTTTGCAGGGC
TTTCCTGTGATATGAATGTACTCCTGTCCATTGCCTGCAGGCATAACCTAAAGGTGGTTGAGGACGCAGCCCATGCCCTA
CCTACCACCTGTAACGGTCAGCTGATTGGTACACTAGCGAGCGATGTCACCGTATACAGCTTTTATGCCACCAAGACCAT
CACCACTGGCGAGGGAGGGATGATCGTTACAAGAAATCCTGAGTTGGCAAAGCGCTGCCGGGTGATGCGCCTGCATGGCA
TCAGCCGAGATGCCTTTGATCGGTATACCTCCACCAAACCCTCATGGCATTACGAGGTAATAGCCCCCGGTTATAAGTAT
AATATGACTGATATTGCGGCCTCATTGGGTATTCACCAGTTGCACAAGGCACATCTGTTTCAGCAAAAACGTCAGACCAT
GGCAGCAGGATATGACGAGGCATTACAGGGGTTGCCACTGCTGCTACCACCCCATGCGCCGTCCGGTGATACCCACGCAT
GGCACCTGTATGTTATCCGTTTAACAGACGACGCCCCGGTTAGCCGCGACCGCTTCATCGAGCTGATGGCTGAAAAAGGG
ATCGGCTGCAGCGTCCATTTTATTCCGCTGCATCTGCATCCCTACTGGCGTGACCGTTACAACCTGCAACCGGAGGATTT
CCCTTGTGCGCTTCACACCTATGAGCAGGCAGTGAGCCTGCCGCTCTACACAAAAATGTCTGATGATGACCAGAACCGAG
TAATTCGGACAGTCAAGGAGATTCTGGGTTAA

Upstream 100 bases:

>100_bases
GGCAGCCTTTTGGCAGCTTTGACCGAATCCAAGGCGCTGGCAGAGCTTGCCAGCGAGTACAAAGTTCATCCAAGCCACTA
CTGATATCGGAGGTAATTTT

Downstream 100 bases:

>100_bases
CGTCAGCATCACGACGATCATTCTTTATTCGGCTGCCGCTCTTCTTGGGAATCAGAGAAGGGGCAACCACAATGTAACGG
ACTTCCTTGTCACGGCCTTC

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MNTFLPFALPDIGEEEINEALDSLRSGWLTTGPKTKRFEEEFAAFVGNGVEAIAVNSATAGLHLALEAVGIGPGDEVITT
PYTFTSTAEVIRYLGADPVFVDSDPNTYNIDPTKIEAAITPRTKAIVPVHFAGLSCDMNVLLSIACRHNLKVVEDAAHAL
PTTCNGQLIGTLASDVTVYSFYATKTITTGEGGMIVTRNPELAKRCRVMRLHGISRDAFDRYTSTKPSWHYEVIAPGYKY
NMTDIAASLGIHQLHKAHLFQQKRQTMAAGYDEALQGLPLLLPPHAPSGDTHAWHLYVIRLTDDAPVSRDRFIELMAEKG
IGCSVHFIPLHLHPYWRDRYNLQPEDFPCALHTYEQAVSLPLYTKMSDDDQNRVIRTVKEILG

Sequences:

>Translated_383_residues
MNTFLPFALPDIGEEEINEALDSLRSGWLTTGPKTKRFEEEFAAFVGNGVEAIAVNSATAGLHLALEAVGIGPGDEVITT
PYTFTSTAEVIRYLGADPVFVDSDPNTYNIDPTKIEAAITPRTKAIVPVHFAGLSCDMNVLLSIACRHNLKVVEDAAHAL
PTTCNGQLIGTLASDVTVYSFYATKTITTGEGGMIVTRNPELAKRCRVMRLHGISRDAFDRYTSTKPSWHYEVIAPGYKY
NMTDIAASLGIHQLHKAHLFQQKRQTMAAGYDEALQGLPLLLPPHAPSGDTHAWHLYVIRLTDDAPVSRDRFIELMAEKG
IGCSVHFIPLHLHPYWRDRYNLQPEDFPCALHTYEQAVSLPLYTKMSDDDQNRVIRTVKEILG
>Mature_383_residues
MNTFLPFALPDIGEEEINEALDSLRSGWLTTGPKTKRFEEEFAAFVGNGVEAIAVNSATAGLHLALEAVGIGPGDEVITT
PYTFTSTAEVIRYLGADPVFVDSDPNTYNIDPTKIEAAITPRTKAIVPVHFAGLSCDMNVLLSIACRHNLKVVEDAAHAL
PTTCNGQLIGTLASDVTVYSFYATKTITTGEGGMIVTRNPELAKRCRVMRLHGISRDAFDRYTSTKPSWHYEVIAPGYKY
NMTDIAASLGIHQLHKAHLFQQKRQTMAAGYDEALQGLPLLLPPHAPSGDTHAWHLYVIRLTDDAPVSRDRFIELMAEKG
IGCSVHFIPLHLHPYWRDRYNLQPEDFPCALHTYEQAVSLPLYTKMSDDDQNRVIRTVKEILG

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=389, Percent_Identity=42.6735218508997, Blast_Score=297, Evalue=8e-82,
Organism=Escherichia coli, GI2367285, Length=380, Percent_Identity=34.4736842105263, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42379; Mature: 42379

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFLPFALPDIGEEEINEALDSLRSGWLTTGPKTKRFEEEFAAFVGNGVEAIAVNSATA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCC
GLHLALEAVGIGPGDEVITTPYTFTSTAEVIRYLGADPVFVDSDPNTYNIDPTKIEAAIT
CEEEEEEEEECCCCCCEEECCEEECCHHHHHHHHCCCCEEECCCCCEECCCHHEEEEEEC
PRTKAIVPVHFAGLSCDMNVLLSIACRHNLKVVEDAAHALPTTCNGQLIGTLASDVTVYS
CCCCEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEE
FYATKTITTGEGGMIVTRNPELAKRCRVMRLHGISRDAFDRYTSTKPSWHYEVIAPGYKY
EEEEEEEEECCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCEE
NMTDIAASLGIHQLHKAHLFQQKRQTMAAGYDEALQGLPLLLPPHAPSGDTHAWHLYVIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCCCEEEEEEEEE
LTDDAPVSRDRFIELMAEKGIGCSVHFIPLHLHPYWRDRYNLQPEDFPCALHTYEQAVSL
ECCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCC
PLYTKMSDDDQNRVIRTVKEILG
CEEEECCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MNTFLPFALPDIGEEEINEALDSLRSGWLTTGPKTKRFEEEFAAFVGNGVEAIAVNSATA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCC
GLHLALEAVGIGPGDEVITTPYTFTSTAEVIRYLGADPVFVDSDPNTYNIDPTKIEAAIT
CEEEEEEEEECCCCCCEEECCEEECCHHHHHHHHCCCCEEECCCCCEECCCHHEEEEEEC
PRTKAIVPVHFAGLSCDMNVLLSIACRHNLKVVEDAAHALPTTCNGQLIGTLASDVTVYS
CCCCEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEE
FYATKTITTGEGGMIVTRNPELAKRCRVMRLHGISRDAFDRYTSTKPSWHYEVIAPGYKY
EEEEEEEEECCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCEE
NMTDIAASLGIHQLHKAHLFQQKRQTMAAGYDEALQGLPLLLPPHAPSGDTHAWHLYVIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCCCEEEEEEEEE
LTDDAPVSRDRFIELMAEKGIGCSVHFIPLHLHPYWRDRYNLQPEDFPCALHTYEQAVSL
ECCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCC
PLYTKMSDDDQNRVIRTVKEILG
CEEEECCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]