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The map label for this gene is exeD [H]

Identifier: 189424524

GI number: 189424524

Start: 1524000

End: 1526309

Strand: Reverse

Name: exeD [H]

Synonym: Glov_1462

Alternate gene names: 189424524

Gene position: 1526309-1524000 (Counterclockwise)

Preceding gene: 189424525

Following gene: 189424523

Centisome position: 38.96

GC content: 59.39

Gene sequence:

>2310_bases
ATGACTAAACCACGTTACATAGCTATTTTAGTGGTAGCCTTAGCACTTTTTATTTCCGGTTGTTCCGCCGCCCGCAAAAA
TTATAGCGAAGGCAGGGATCTGGAAGAACAGGGCAAGCTGGAAGAGGCGATGTACCGCTACGCCGAGGCGGTCAAAGCTG
CTCCGGAGGAGTCTGAATACCGGGTAAAATTCCTGAATACACGCATGGCTGCGGCCAGGGGGCGCGAGCAGGAGGGTGAT
ACCCTGCTGAAGACAGGCAACTATGCCGGTGCCGTGGCTGCCTATCAAACCGCTGCCGGTCTTGACCCTAGTCAGCCCCG
GCTTGTGCAGAAGGCAAACAACGCCATCCGGTTGCGGGATGCCGCGGCCGCTTATCAGGAAGGTCTGACCCTGGAAAAAG
GCAACAAGCTGCGGGACGCAGCCACCGCCTTTGGACGGGCCCTGGATCTGGCAGCGGAGAACCCGGAGTACCGCAGCGCA
GCCCAGCGCATTGCCGCGCTGCGCAAATCCAAGCTTGACGGCTTTGAGCTGCAGTTGAAGTCAAAACAGCCGATCACCCT
GCGTTTCCGTGAAACACGCCTGAAGGATATCTTCTCGGTCATCTCGCAACTGTCCGGCATCAACTTCATCTTTGACCCGG
ATGTCAAAGACCAGAGTGTCACCATTACCCTGGAAAACGCCACCTTCCGCCAGTCAACCGACCTCCTGACCGGCATGTAC
AAACTGGGTCACAAGATACTGAACGAGACCACGGTATTGATCTACCCGCAGAGTGCGGAGAAGACCAAGCAGTACCAGGA
CATGCAGCTGCGCACCTTCCACCTGAACCACCTGGATGCCAAGAAGGCGGCCAACCTGATCAGGACCATGCTGCAGGTGC
GGCGGCTGTATATCAACGAGGATGCCAATGCCCTGGTGGTACGGGATACCAGTGATGTCACCGATGTGATTGAAAAGATC
CTGGAGGCCCATGACCTGCCGGAGGCAGAGGTGGTGCTGGATGTCGAGGTGATCGAGATCAGTGACAAGAACGCCCACAA
CGTCGGTCTGCTGCTGAGCAACTACGATGTGCAGCTGGGGGCGTTCTCCCCCAGCAACGAACTGCTGGCAACCACGCTCA
AGGACACCACCTCCACGACATCCACCACGGTCACCACCGATGCAACCATCAAGAACCTGGTCAAGGCCTTCAGCATCAAC
AGCTTCGGCGGTTATGTCACCGTGCCCAATGCCCAGTACAACTTCGGCAAGACCCTGACCAACGGCGAGGTACTCTCCAA
TCCCAAGATCAGGGTCAAGAACAAGGAAAAGGCCAAGTTCAATGTCGGCACCAGGGTACCGATCACCACCACCACCATGG
CCACCACCGGCACCACCTCGCAGGTCAACGTGCAGTACGTGGATGTGGGGGTCAAGGTCAATGCCGAGCCCACCATCCAG
CTCAACAACGAGGTCTCCATCAAGCTGGGACTTGAGGTCAGCTCGATCATCTCCCGCGAGACCGTGGGGGGCAAGGACAG
TGCCACCACGGTGGTCACCATCGGCACCCGCAACCTTGATACGGTCCTAAGCCTCAAAGACGGTGAGACCAGCGTGATCG
GCGGCCTGATCTCCCACAGCAACAGCGACAGCAAACAGAAGATCTTCCTGCTGGGTGACATCCCGCTTATCGGACCGCTC
TTGTCAAACAGCAAGACCGACAACGACAAGACCGAGCTGATCCTGGCCATTACACCCAGGCTCGTCAGAGGCGTGACCGT
GCAACCCCGCAAGGTAACCTCCTTTATCTCCGGCAAAGAGGATGACCCGTCGGTGACACCACCCTATGCCTCATTTGAAC
AGGAGCCGGAATACGCCGCGCCGGTGCCGGCAGCGGCAGTTCACCAGGCAGTTCCGGCAATCAAACCACAACCGCCACAG
GGCATACCGGCGCAACCGTCAACCAGGCCGGCACCTCTGCCAACAGTTCCGGCCAAGACAGGAGCTGCACCACAGCAACA
GCCCGGGGCAGCGGCAGCAACACCAGCGACACAGAACCGGCCGGTTATGCCACCGCCTGCCAGAAAGCCGAACAGTGTCT
TTAAAATGGCCCCGGTGCCGGGCCGTCAACAGCCGACGACGACTCCGGTTGCTGCACCGGTGGTGGCACAGCCTGCGCCG
CCACCACCACCGGTTACCGTAGAACCTGAACCGGTTCCAGCGGCGGTTGCTGCAGAGCCGGACCCGGCGCAAGCACCACC
ACCGCCGGAGCCGGACCTGGGTTCATCAACGGCTCCGCCCGAACCTGCCAACGAGGCGGCTGGTCCATGA

Upstream 100 bases:

>100_bases
GTGCGGATGATGGGGATGAGATGGCGTTGGGAATGCGGTAAAGGCAATTTTGAATGGTGAAATCTGGTAGTTGTATGAAG
TTGTTATCTGTGGAGATGAT

Downstream 100 bases:

>100_bases
TTGGCCGCAGCACCAAAGGGGTAACTCTGGTTGAGCTGATAATAGCGGTCACCCTGCTGGCACTGCTGGCATCAGCAGTA
CTGCCGTTTACCCGCATGAC

Product: type II and III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 769; Mature: 768

Protein sequence:

>769_residues
MTKPRYIAILVVALALFISGCSAARKNYSEGRDLEEQGKLEEAMYRYAEAVKAAPEESEYRVKFLNTRMAAARGREQEGD
TLLKTGNYAGAVAAYQTAAGLDPSQPRLVQKANNAIRLRDAAAAYQEGLTLEKGNKLRDAATAFGRALDLAAENPEYRSA
AQRIAALRKSKLDGFELQLKSKQPITLRFRETRLKDIFSVISQLSGINFIFDPDVKDQSVTITLENATFRQSTDLLTGMY
KLGHKILNETTVLIYPQSAEKTKQYQDMQLRTFHLNHLDAKKAANLIRTMLQVRRLYINEDANALVVRDTSDVTDVIEKI
LEAHDLPEAEVVLDVEVIEISDKNAHNVGLLLSNYDVQLGAFSPSNELLATTLKDTTSTTSTTVTTDATIKNLVKAFSIN
SFGGYVTVPNAQYNFGKTLTNGEVLSNPKIRVKNKEKAKFNVGTRVPITTTTMATTGTTSQVNVQYVDVGVKVNAEPTIQ
LNNEVSIKLGLEVSSIISRETVGGKDSATTVVTIGTRNLDTVLSLKDGETSVIGGLISHSNSDSKQKIFLLGDIPLIGPL
LSNSKTDNDKTELILAITPRLVRGVTVQPRKVTSFISGKEDDPSVTPPYASFEQEPEYAAPVPAAAVHQAVPAIKPQPPQ
GIPAQPSTRPAPLPTVPAKTGAAPQQQPGAAAATPATQNRPVMPPPARKPNSVFKMAPVPGRQQPTTTPVAAPVVAQPAP
PPPPVTVEPEPVPAAVAAEPDPAQAPPPPEPDLGSSTAPPEPANEAAGP

Sequences:

>Translated_769_residues
MTKPRYIAILVVALALFISGCSAARKNYSEGRDLEEQGKLEEAMYRYAEAVKAAPEESEYRVKFLNTRMAAARGREQEGD
TLLKTGNYAGAVAAYQTAAGLDPSQPRLVQKANNAIRLRDAAAAYQEGLTLEKGNKLRDAATAFGRALDLAAENPEYRSA
AQRIAALRKSKLDGFELQLKSKQPITLRFRETRLKDIFSVISQLSGINFIFDPDVKDQSVTITLENATFRQSTDLLTGMY
KLGHKILNETTVLIYPQSAEKTKQYQDMQLRTFHLNHLDAKKAANLIRTMLQVRRLYINEDANALVVRDTSDVTDVIEKI
LEAHDLPEAEVVLDVEVIEISDKNAHNVGLLLSNYDVQLGAFSPSNELLATTLKDTTSTTSTTVTTDATIKNLVKAFSIN
SFGGYVTVPNAQYNFGKTLTNGEVLSNPKIRVKNKEKAKFNVGTRVPITTTTMATTGTTSQVNVQYVDVGVKVNAEPTIQ
LNNEVSIKLGLEVSSIISRETVGGKDSATTVVTIGTRNLDTVLSLKDGETSVIGGLISHSNSDSKQKIFLLGDIPLIGPL
LSNSKTDNDKTELILAITPRLVRGVTVQPRKVTSFISGKEDDPSVTPPYASFEQEPEYAAPVPAAAVHQAVPAIKPQPPQ
GIPAQPSTRPAPLPTVPAKTGAAPQQQPGAAAATPATQNRPVMPPPARKPNSVFKMAPVPGRQQPTTTPVAAPVVAQPAP
PPPPVTVEPEPVPAAVAAEPDPAQAPPPPEPDLGSSTAPPEPANEAAGP
>Mature_768_residues
TKPRYIAILVVALALFISGCSAARKNYSEGRDLEEQGKLEEAMYRYAEAVKAAPEESEYRVKFLNTRMAAARGREQEGDT
LLKTGNYAGAVAAYQTAAGLDPSQPRLVQKANNAIRLRDAAAAYQEGLTLEKGNKLRDAATAFGRALDLAAENPEYRSAA
QRIAALRKSKLDGFELQLKSKQPITLRFRETRLKDIFSVISQLSGINFIFDPDVKDQSVTITLENATFRQSTDLLTGMYK
LGHKILNETTVLIYPQSAEKTKQYQDMQLRTFHLNHLDAKKAANLIRTMLQVRRLYINEDANALVVRDTSDVTDVIEKIL
EAHDLPEAEVVLDVEVIEISDKNAHNVGLLLSNYDVQLGAFSPSNELLATTLKDTTSTTSTTVTTDATIKNLVKAFSINS
FGGYVTVPNAQYNFGKTLTNGEVLSNPKIRVKNKEKAKFNVGTRVPITTTTMATTGTTSQVNVQYVDVGVKVNAEPTIQL
NNEVSIKLGLEVSSIISRETVGGKDSATTVVTIGTRNLDTVLSLKDGETSVIGGLISHSNSDSKQKIFLLGDIPLIGPLL
SNSKTDNDKTELILAITPRLVRGVTVQPRKVTSFISGKEDDPSVTPPYASFEQEPEYAAPVPAAAVHQAVPAIKPQPPQG
IPAQPSTRPAPLPTVPAKTGAAPQQQPGAAAATPATQNRPVMPPPARKPNSVFKMAPVPGRQQPTTTPVAAPVVAQPAPP
PPPVTVEPEPVPAAVAAEPDPAQAPPPPEPDLGSSTAPPEPANEAAGP

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG4796

COG function: function code U; Type II secretory pathway, component HofQ

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=435, Percent_Identity=22.2988505747126, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87082242, Length=292, Percent_Identity=26.027397260274, Blast_Score=83, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 82592; Mature: 82460

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPRYIAILVVALALFISGCSAARKNYSEGRDLEEQGKLEEAMYRYAEAVKAAPEESEY
CCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCE
RVKFLNTRMAAARGREQEGDTLLKTGNYAGAVAAYQTAAGLDPSQPRLVQKANNAIRLRD
EEEEHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHCCCEEEEHH
AAAAYQEGLTLEKGNKLRDAATAFGRALDLAAENPEYRSAAQRIAALRKSKLDGFELQLK
HHHHHHCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
SKQPITLRFRETRLKDIFSVISQLSGINFIFDPDVKDQSVTITLENATFRQSTDLLTGMY
CCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHH
KLGHKILNETTVLIYPQSAEKTKQYQDMQLRTFHLNHLDAKKAANLIRTMLQVRRLYINE
HHHHHHHCCCEEEEECCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
DANALVVRDTSDVTDVIEKILEAHDLPEAEVVLDVEVIEISDKNAHNVGLLLSNYDVQLG
CCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCEEEE
AFSPSNELLATTLKDTTSTTSTTVTTDATIKNLVKAFSINSFGGYVTVPNAQYNFGKTLT
CCCCCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
NGEVLSNPKIRVKNKEKAKFNVGTRVPITTTTMATTGTTSQVNVQYVDVGVKVNAEPTIQ
CCEEECCCCEEECCCCCCEEECCCCCCEEEEEEEECCCCCEEEEEEEEEEEEECCCCEEE
LNNEVSIKLGLEVSSIISRETVGGKDSATTVVTIGTRNLDTVLSLKDGETSVIGGLISHS
ECCEEEEEECCCHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHCC
NSDSKQKIFLLGDIPLIGPLLSNSKTDNDKTELILAITPRLVRGVTVQPRKVTSFISGKE
CCCCCEEEEEEECCCHHHHHHCCCCCCCCCEEEEEEECHHHHCCCCCCCHHHHHHHCCCC
DDPSVTPPYASFEQEPEYAAPVPAAAVHQAVPAIKPQPPQGIPAQPSTRPAPLPTVPAKT
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GAAPQQQPGAAAATPATQNRPVMPPPARKPNSVFKMAPVPGRQQPTTTPVAAPVVAQPAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCC
PPPPVTVEPEPVPAAVAAEPDPAQAPPPPEPDLGSSTAPPEPANEAAGP
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKPRYIAILVVALALFISGCSAARKNYSEGRDLEEQGKLEEAMYRYAEAVKAAPEESEY
CCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCE
RVKFLNTRMAAARGREQEGDTLLKTGNYAGAVAAYQTAAGLDPSQPRLVQKANNAIRLRD
EEEEHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHCCCEEEEHH
AAAAYQEGLTLEKGNKLRDAATAFGRALDLAAENPEYRSAAQRIAALRKSKLDGFELQLK
HHHHHHCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
SKQPITLRFRETRLKDIFSVISQLSGINFIFDPDVKDQSVTITLENATFRQSTDLLTGMY
CCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHH
KLGHKILNETTVLIYPQSAEKTKQYQDMQLRTFHLNHLDAKKAANLIRTMLQVRRLYINE
HHHHHHHCCCEEEEECCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
DANALVVRDTSDVTDVIEKILEAHDLPEAEVVLDVEVIEISDKNAHNVGLLLSNYDVQLG
CCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCEEEE
AFSPSNELLATTLKDTTSTTSTTVTTDATIKNLVKAFSINSFGGYVTVPNAQYNFGKTLT
CCCCCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
NGEVLSNPKIRVKNKEKAKFNVGTRVPITTTTMATTGTTSQVNVQYVDVGVKVNAEPTIQ
CCEEECCCCEEECCCCCCEEECCCCCCEEEEEEEECCCCCEEEEEEEEEEEEECCCCEEE
LNNEVSIKLGLEVSSIISRETVGGKDSATTVVTIGTRNLDTVLSLKDGETSVIGGLISHS
ECCEEEEEECCCHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHCC
NSDSKQKIFLLGDIPLIGPLLSNSKTDNDKTELILAITPRLVRGVTVQPRKVTSFISGKE
CCCCCEEEEEEECCCHHHHHHCCCCCCCCCEEEEEEECHHHHCCCCCCCHHHHHHHCCCC
DDPSVTPPYASFEQEPEYAAPVPAAAVHQAVPAIKPQPPQGIPAQPSTRPAPLPTVPAKT
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GAAPQQQPGAAAATPATQNRPVMPPPARKPNSVFKMAPVPGRQQPTTTPVAAPVVAQPAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCC
PPPPVTVEPEPVPAAVAAEPDPAQAPPPPEPDLGSSTAPPEPANEAAGP
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1640836 [H]