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The map label for this gene is trpH [H]

Identifier: 189424390

GI number: 189424390

Start: 1370994

End: 1371854

Strand: Reverse

Name: trpH [H]

Synonym: Glov_1326

Alternate gene names: 189424390

Gene position: 1371854-1370994 (Counterclockwise)

Preceding gene: 189424439

Following gene: 189424388

Centisome position: 35.02

GC content: 52.61

Gene sequence:

>861_bases
ATGATTGATCTCCATCTGCATTCAAGCTGCTCTGACGGCATCCTGGCTCCGGCGCAGCTGGTTTCTGCCGCACAACTATC
AGGACTCAGCACAATTGCCTTGTGCGACCATGATACGGTTGCCGGGGTTGAAGCCGCTACCCTGGCCGGAAAAGAACAAG
GCATAGAGGTCATTCCCGGAGTTGAACTTTCTGTCTGCTTTAGAGGATTTTCCGATGTTCATCTACTGGGATACTGGATT
GATATTTATGCCCCGGAATTGACAGAACAACTGGACAGATTCGCCTTTCGCAGAGCCAACCGCAATCGAGAAATTGTTAT
GGCTGTAAATCAGGCACTGCAACAGCAGGCAAAAGAGCCGTTAGCGTTTAACGAAGTTGAGGCACTTGCTGACGGTGTCA
TGGGACGCCCGCACATTGCCCGTGCCCTGCTGCAGCGTGGCTACGCAACCGGCATGGAAGACGCTTTTTCCCGTTATCTT
GTCCCGTGTGACGTGCCCAAAACCTACTGGCCCATGGAAGAGGCACTGGCAACGATTCAACGCGTTGGCGGGGTTGCAGT
ACTGGCCCATCCAACCAGCATCACCCGCGACCAACAGCTTTTAACGGAGCTGATCTCTGAGTTGAAAGAGCTTGGACTGG
ATGGCATCGAAATATACAACTCCTTGGCAACAGATCAGGAGACCATGTTTTTGCAGAGTCTGGCAAATCGTTTACAGCTG
ATGCCAACCGGCGGTTCGGATTTCCACGGTATTGAGGAACATGATCAAATAGGAAAAGGGCGGGGAGGCATACGTTTTTC
CGATGCCTTGCTCCCGCCCTTACGCAAACGTGCTGCCGAACGCTCGACCCGAGCTAACTAA

Upstream 100 bases:

>100_bases
GCGCATGGAAGTAATAGTACCCCATGCCTCCTCAGCTGGCAACCGGAGGCTTGCTTTTTTATCCCTGCAGCGGCATCATG
CTGCCAGAAAGGATATGATG

Downstream 100 bases:

>100_bases
TCAGCATTTTTCCTTATATTCCCTATAGTTAACCACGTGCAGATTATCAACCACACTTTCAACACCCTTGATGGCTGCAG
CTACCTTCAGTGCAGCCTTT

Product: PHP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MIDLHLHSSCSDGILAPAQLVSAAQLSGLSTIALCDHDTVAGVEAATLAGKEQGIEVIPGVELSVCFRGFSDVHLLGYWI
DIYAPELTEQLDRFAFRRANRNREIVMAVNQALQQQAKEPLAFNEVEALADGVMGRPHIARALLQRGYATGMEDAFSRYL
VPCDVPKTYWPMEEALATIQRVGGVAVLAHPTSITRDQQLLTELISELKELGLDGIEIYNSLATDQETMFLQSLANRLQL
MPTGGSDFHGIEEHDQIGKGRGGIRFSDALLPPLRKRAAERSTRAN

Sequences:

>Translated_286_residues
MIDLHLHSSCSDGILAPAQLVSAAQLSGLSTIALCDHDTVAGVEAATLAGKEQGIEVIPGVELSVCFRGFSDVHLLGYWI
DIYAPELTEQLDRFAFRRANRNREIVMAVNQALQQQAKEPLAFNEVEALADGVMGRPHIARALLQRGYATGMEDAFSRYL
VPCDVPKTYWPMEEALATIQRVGGVAVLAHPTSITRDQQLLTELISELKELGLDGIEIYNSLATDQETMFLQSLANRLQL
MPTGGSDFHGIEEHDQIGKGRGGIRFSDALLPPLRKRAAERSTRAN
>Mature_286_residues
MIDLHLHSSCSDGILAPAQLVSAAQLSGLSTIALCDHDTVAGVEAATLAGKEQGIEVIPGVELSVCFRGFSDVHLLGYWI
DIYAPELTEQLDRFAFRRANRNREIVMAVNQALQQQAKEPLAFNEVEALADGVMGRPHIARALLQRGYATGMEDAFSRYL
VPCDVPKTYWPMEEALATIQRVGGVAVLAHPTSITRDQQLLTELISELKELGLDGIEIYNSLATDQETMFLQSLANRLQL
MPTGGSDFHGIEEHDQIGKGRGGIRFSDALLPPLRKRAAERSTRAN

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=255, Percent_Identity=33.3333333333333, Blast_Score=121, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31292; Mature: 31292

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLHLHSSCSDGILAPAQLVSAAQLSGLSTIALCDHDTVAGVEAATLAGKEQGIEVIPG
CEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCHHCCCEECCC
VELSVCFRGFSDVHLLGYWIDIYAPELTEQLDRFAFRRANRNREIVMAVNQALQQQAKEP
CHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
LAFNEVEALADGVMGRPHIARALLQRGYATGMEDAFSRYLVPCDVPKTYWPMEEALATIQ
CCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
RVGGVAVLAHPTSITRDQQLLTELISELKELGLDGIEIYNSLATDQETMFLQSLANRLQL
HHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHEE
MPTGGSDFHGIEEHDQIGKGRGGIRFSDALLPPLRKRAAERSTRAN
CCCCCCCCCCCCHHHHHCCCCCCCEEHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MIDLHLHSSCSDGILAPAQLVSAAQLSGLSTIALCDHDTVAGVEAATLAGKEQGIEVIPG
CEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCHHCCCEECCC
VELSVCFRGFSDVHLLGYWIDIYAPELTEQLDRFAFRRANRNREIVMAVNQALQQQAKEP
CHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
LAFNEVEALADGVMGRPHIARALLQRGYATGMEDAFSRYLVPCDVPKTYWPMEEALATIQ
CCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
RVGGVAVLAHPTSITRDQQLLTELISELKELGLDGIEIYNSLATDQETMFLQSLANRLQL
HHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHEE
MPTGGSDFHGIEEHDQIGKGRGGIRFSDALLPPLRKRAAERSTRAN
CCCCCCCCCCCCHHHHHCCCCCCCEEHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]