| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424338
Identifier: 189424338
GI number: 189424338
Start: 1322509
End: 1323822
Strand: Reverse
Name: 189424338
Synonym: Glov_1273
Alternate gene names: NA
Gene position: 1323822-1322509 (Counterclockwise)
Preceding gene: 189424339
Following gene: 189424337
Centisome position: 33.79
GC content: 59.74
Gene sequence:
>1314_bases ATGATCATACATGTCATTCAACTGCATGAGTCCGGCTTTACCCTTGGCAGATTCCGACATGCCGGCAGGGAACTGGTGCC GCTTACCGCTATCCGGCACCAGACAGAGAACCGGGAAGAGCTGGTCAGCAAAATAGCGGAGAGCCTGGCTTCAGTCACGA AGGGCGAGACCAGGACGATCCTGTCCATCCCCCCCGGTCTGTTGAACCTGCGCGAACTGCAGCTTCCCATCACCGAGCGG GCAAAAATCCGGGCTGTCCTGCCGTTTGAGCTGGCAGGGGAAACCGCTCAGGATGACGCCACCATTGTCTGTGATGCGGT GGCGCTGGCAGGGGGAGGCCAGCTGGCTGGCTGGGCAGCACAGGGGCAGATTGCGGACCTGATCACCACCCTGACTGAGG CAGGGGCTGAACCGGAGATAGTCACCGCCTCCTGCCTGCACTGGAATCTGCTGCTGCCGCCCGACTCCTCTGAAACTGTG GCAATCTGCGACAGTACCGCCGTCACCGTCTGCCGCCAGGGCCAGCTGCTGTTCTGCAGAACCTTGAACAACAACAGCGA CGACCTTGAACGGACGCTTGCCACGCTGGAACTGACCCGCGACCTGCAGGTAGACCGGGTCCTGCTCCTTGACCCGCTGT TGCTGCCTCTTGCCTCAACGTCAGAGCGGGTTATCGAACTGTTCCCCCTGCCGGATGCGCTAAAGACACCGGCATCGCAG GATGGGCTGGCCCCGCTGGCCCTGGCGGCCCCCTTTGCTGCAGCGTTGGCGTTCTGTTTTGGAGAACCGTTCAATCTTCG CAGCGGGCCATTGGCCTGGAAGCAGAAAAACAGGCGTTTATTGCGAGCGTTTCGTCTGCCGCTGATACTGGCCTGTATCG CTGCCGTTCTGCTGCTTGCAGAGGCAGGCACCCGCTGGTACCTGCTCTCACGGGACATTACATCGCTGAACAGTTCCATC GGCAAGATCTACCGGGAGAGCTTCCCGAACCGGAAGAAAGCGGTGGATGAGGCAGCGGAACTGAAGGCTGAAATACGCCG GCTTGAGGGCACCAGCCTCAGCCCCACTATTCTGCCGTTCCTGCGTCTGCTGACTGAACACAAGGGCGTTGAGATCAGCG GGTTCAGTGAAATCGACTATGACGGAACCCGTTTTAAAGTCAAAGGAGATGGCAGGACCAGTGCCGCTATCAGCACCTTG CGGCAAAAGCTGCTAACAGCCGGATGGCAGGTGGAACAGCCGGAGATCACCAGCCGGCCGGATGGAACGATCCTCTTTCA GCTGAAAGGGAACCGTGGAGGTGCAAAACCATGA
Upstream 100 bases:
>100_bases TCCGAGGCCACTGTCAACGACGTTACCCGCACCATTGAAGCAGTAGCCCGTATCAACGGCGGGACATCCACCATCATCTA CTGGCGGGAGTATTGAGACC
Downstream 100 bases:
>100_bases CGCTACTCAGTAAAATTACAGATCAGGTATCGACACTGGATGCTGAAATCAGGCGCATGATGATCATTGCCCTTTCCGTC GTACTACTCTTTTTTGTCTG
Product: general secretion pathway protein L
Products: NA
Alternate protein names: Type II Secretion System Protein GspL
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MIIHVIQLHESGFTLGRFRHAGRELVPLTAIRHQTENREELVSKIAESLASVTKGETRTILSIPPGLLNLRELQLPITER AKIRAVLPFELAGETAQDDATIVCDAVALAGGGQLAGWAAQGQIADLITTLTEAGAEPEIVTASCLHWNLLLPPDSSETV AICDSTAVTVCRQGQLLFCRTLNNNSDDLERTLATLELTRDLQVDRVLLLDPLLLPLASTSERVIELFPLPDALKTPASQ DGLAPLALAAPFAAALAFCFGEPFNLRSGPLAWKQKNRRLLRAFRLPLILACIAAVLLLAEAGTRWYLLSRDITSLNSSI GKIYRESFPNRKKAVDEAAELKAEIRRLEGTSLSPTILPFLRLLTEHKGVEISGFSEIDYDGTRFKVKGDGRTSAAISTL RQKLLTAGWQVEQPEITSRPDGTILFQLKGNRGGAKP
Sequences:
>Translated_437_residues MIIHVIQLHESGFTLGRFRHAGRELVPLTAIRHQTENREELVSKIAESLASVTKGETRTILSIPPGLLNLRELQLPITER AKIRAVLPFELAGETAQDDATIVCDAVALAGGGQLAGWAAQGQIADLITTLTEAGAEPEIVTASCLHWNLLLPPDSSETV AICDSTAVTVCRQGQLLFCRTLNNNSDDLERTLATLELTRDLQVDRVLLLDPLLLPLASTSERVIELFPLPDALKTPASQ DGLAPLALAAPFAAALAFCFGEPFNLRSGPLAWKQKNRRLLRAFRLPLILACIAAVLLLAEAGTRWYLLSRDITSLNSSI GKIYRESFPNRKKAVDEAAELKAEIRRLEGTSLSPTILPFLRLLTEHKGVEISGFSEIDYDGTRFKVKGDGRTSAAISTL RQKLLTAGWQVEQPEITSRPDGTILFQLKGNRGGAKP >Mature_437_residues MIIHVIQLHESGFTLGRFRHAGRELVPLTAIRHQTENREELVSKIAESLASVTKGETRTILSIPPGLLNLRELQLPITER AKIRAVLPFELAGETAQDDATIVCDAVALAGGGQLAGWAAQGQIADLITTLTEAGAEPEIVTASCLHWNLLLPPDSSETV AICDSTAVTVCRQGQLLFCRTLNNNSDDLERTLATLELTRDLQVDRVLLLDPLLLPLASTSERVIELFPLPDALKTPASQ DGLAPLALAAPFAAALAFCFGEPFNLRSGPLAWKQKNRRLLRAFRLPLILACIAAVLLLAEAGTRWYLLSRDITSLNSSI GKIYRESFPNRKKAVDEAAELKAEIRRLEGTSLSPTILPFLRLLTEHKGVEISGFSEIDYDGTRFKVKGDGRTSAAISTL RQKLLTAGWQVEQPEITSRPDGTILFQLKGNRGGAKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47611; Mature: 47611
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIHVIQLHESGFTLGRFRHAGRELVPLTAIRHQTENREELVSKIAESLASVTKGETRTI CEEEEEEEECCCCCHHHHHHCCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEE LSIPPGLLNLRELQLPITERAKIRAVLPFELAGETAQDDATIVCDAVALAGGGQLAGWAA EECCCCCCCHHHCCCCCCCCCEEEEEECHHHCCCCCCCCCEEEEEHHHCCCCCCCCCEEC QGQIADLITTLTEAGAEPEIVTASCLHWNLLLPPDSSETVAICDSTAVTVCRQGQLLFCR CCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCEEEEECCCHHHHCCCCCEEEEE TLNNNSDDLERTLATLELTRDLQVDRVLLLDPLLLPLASTSERVIELFPLPDALKTPASQ ECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHCCCCCC DGLAPLALAAPFAAALAFCFGEPFNLRSGPLAWKQKNRRLLRAFRLPLILACIAAVLLLA CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAGTRWYLLSRDITSLNSSIGKIYRESFPNRKKAVDEAAELKAEIRRLEGTSLSPTILPF CCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LRLLTEHKGVEISGFSEIDYDGTRFKVKGDGRTSAAISTLRQKLLTAGWQVEQPEITSRP HHHHHHCCCCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC DGTILFQLKGNRGGAKP CCEEEEEEECCCCCCCC >Mature Secondary Structure MIIHVIQLHESGFTLGRFRHAGRELVPLTAIRHQTENREELVSKIAESLASVTKGETRTI CEEEEEEEECCCCCHHHHHHCCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEE LSIPPGLLNLRELQLPITERAKIRAVLPFELAGETAQDDATIVCDAVALAGGGQLAGWAA EECCCCCCCHHHCCCCCCCCCEEEEEECHHHCCCCCCCCCEEEEEHHHCCCCCCCCCEEC QGQIADLITTLTEAGAEPEIVTASCLHWNLLLPPDSSETVAICDSTAVTVCRQGQLLFCR CCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCEEEEECCCHHHHCCCCCEEEEE TLNNNSDDLERTLATLELTRDLQVDRVLLLDPLLLPLASTSERVIELFPLPDALKTPASQ ECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHCCCCCC DGLAPLALAAPFAAALAFCFGEPFNLRSGPLAWKQKNRRLLRAFRLPLILACIAAVLLLA CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAGTRWYLLSRDITSLNSSIGKIYRESFPNRKKAVDEAAELKAEIRRLEGTSLSPTILPF CCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LRLLTEHKGVEISGFSEIDYDGTRFKVKGDGRTSAAISTLRQKLLTAGWQVEQPEITSRP HHHHHHCCCCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC DGTILFQLKGNRGGAKP CCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA