| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424326
Identifier: 189424326
GI number: 189424326
Start: 1309111
End: 1309788
Strand: Reverse
Name: 189424326
Synonym: Glov_1261
Alternate gene names: NA
Gene position: 1309788-1309111 (Counterclockwise)
Preceding gene: 189424327
Following gene: 189424324
Centisome position: 33.43
GC content: 52.95
Gene sequence:
>678_bases ATGCTTCGTCTCCCGAAAGGCACCCCTCTTTTTGAAAATCTTGACGCCGCTGAACTACAACTGGACGCCATCATCACCAA GCTTGCCCACGGTTGTTTTACCGGCTATGCCAGCCTGACCTTTCCCACCGCAGTCGGCATCCTGGTATTCGAATCAGGCA AACTGGTCAGCATCATTTTTGAGAACAACCAGGGTGTTCGTCTGAATGGCTTCGAAGGCATGACCGCACTGGCAGAGCAG ATGCTCGAAAGCAGCAGCAGCACGCTTAACGTCTACCGGCTTTCCGATGACCTCACCATGTGTATTCACGCCCTGCTGCA GGGTGAGGCCCGTTACCGCGCTCAGGAACTTGCACTGATTGACATCAAGGTCTTGCTGGAGCGGGTCAAAAACGAACAGA TGAACTGCTGTCTCAGGATCTACACCCAGGACCGTTCTGCCATGATTTTCTATAAAGAAGGCAATCCGCTGGGGTTCTTC CATGATGGCTCACACGAGATTGAAGCCTCACCCGGTGATTCTCAGCAGCTTGCTCAGGATCCTGCCGCAAAAATAGATCT CTATACCACGGTAAGTGCCAATGAGCTGATGGGCCATGACCTGCTGGAGATGATCAATGTCAGCAATGTCTGGAAGACGG CCGTCAACCGTTACCAGAGCAAGACAGGCGGACCGTGA
Upstream 100 bases:
>100_bases CCTGATGTCCAAACATTCTTTTGACATTCAGCAATGCCTATCGTAACGTATACAGTATATTTTCATTTTCTGCCGCATTG TACTGTCAGGAGGATTAAGC
Downstream 100 bases:
>100_bases GCCCGCTTTAACCAGACCGGATTGCAGCATTAGAAAAGCCCTGTCACGATTTCGTGGCAGGGCTTTTGTGTAACGACAAA TCCATTCAAATGGAGTTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MLRLPKGTPLFENLDAAELQLDAIITKLAHGCFTGYASLTFPTAVGILVFESGKLVSIIFENNQGVRLNGFEGMTALAEQ MLESSSSTLNVYRLSDDLTMCIHALLQGEARYRAQELALIDIKVLLERVKNEQMNCCLRIYTQDRSAMIFYKEGNPLGFF HDGSHEIEASPGDSQQLAQDPAAKIDLYTTVSANELMGHDLLEMINVSNVWKTAVNRYQSKTGGP
Sequences:
>Translated_225_residues MLRLPKGTPLFENLDAAELQLDAIITKLAHGCFTGYASLTFPTAVGILVFESGKLVSIIFENNQGVRLNGFEGMTALAEQ MLESSSSTLNVYRLSDDLTMCIHALLQGEARYRAQELALIDIKVLLERVKNEQMNCCLRIYTQDRSAMIFYKEGNPLGFF HDGSHEIEASPGDSQQLAQDPAAKIDLYTTVSANELMGHDLLEMINVSNVWKTAVNRYQSKTGGP >Mature_225_residues MLRLPKGTPLFENLDAAELQLDAIITKLAHGCFTGYASLTFPTAVGILVFESGKLVSIIFENNQGVRLNGFEGMTALAEQ MLESSSSTLNVYRLSDDLTMCIHALLQGEARYRAQELALIDIKVLLERVKNEQMNCCLRIYTQDRSAMIFYKEGNPLGFF HDGSHEIEASPGDSQQLAQDPAAKIDLYTTVSANELMGHDLLEMINVSNVWKTAVNRYQSKTGGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24896; Mature: 24896
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLPKGTPLFENLDAAELQLDAIITKLAHGCFTGYASLTFPTAVGILVFESGKLVSIIF CCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEE ENNQGVRLNGFEGMTALAEQMLESSSSTLNVYRLSDDLTMCIHALLQGEARYRAQELALI ECCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHH DIKVLLERVKNEQMNCCLRIYTQDRSAMIFYKEGNPLGFFHDGSHEIEASPGDSQQLAQD HHHHHHHHHCCCHHCEEEEEEECCCCEEEEEECCCEEEEEECCCCEEECCCCCHHHHHCC PAAKIDLYTTVSANELMGHDLLEMINVSNVWKTAVNRYQSKTGGP CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLRLPKGTPLFENLDAAELQLDAIITKLAHGCFTGYASLTFPTAVGILVFESGKLVSIIF CCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEE ENNQGVRLNGFEGMTALAEQMLESSSSTLNVYRLSDDLTMCIHALLQGEARYRAQELALI ECCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHH DIKVLLERVKNEQMNCCLRIYTQDRSAMIFYKEGNPLGFFHDGSHEIEASPGDSQQLAQD HHHHHHHHHCCCHHCEEEEEEECCCCEEEEEECCCEEEEEECCCCEEECCCCCHHHHHCC PAAKIDLYTTVSANELMGHDLLEMINVSNVWKTAVNRYQSKTGGP CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA