| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424288
Identifier: 189424288
GI number: 189424288
Start: 1271657
End: 1272358
Strand: Reverse
Name: 189424288
Synonym: Glov_1223
Alternate gene names: NA
Gene position: 1272358-1271657 (Counterclockwise)
Preceding gene: 189424289
Following gene: 189424285
Centisome position: 32.48
GC content: 39.74
Gene sequence:
>702_bases ATGTCCGAGCATCGCTTGCTAACATCGCAACGGAACATGTTATTCACAGCAATTCAGAATAACGGATTAGATCCTGCTTC TTTCCATTGGGAAATGGCTAATAGCTTTAACCAACATAATCTTATTGTACCGCGTCTCATACACGTACAATCTGACGGAT ATTTCCAGTTCGAATTACAAAATGACGTTGAATGGTGTCAGTATTCTCCGGGACAGACTAAATATATTGAGCAACAGTAC CCTGGGAATTGGAATGGCCAATATTCATATTTTTGTTGCTGGCTAAGTTACCTAAAGGAAGAGTTTGAAACCCCGGATTT ATGGTCGGTAATAGCTGGTGATAGCTCTTTTGAAGTAAATATGAAATCGGATGGTAACGAAGATGAATCAAACAAAAAAT TTAATTCATCAGAGCGAAAGCACATATCTCAAAATTTAAATGAGATTCGTGAATATTTAGTTACAGCACATTCTATATCA GGTTCTAGTCTTAGACTTATTGAAGAACGTCTCAAATACCTCGAAGATGCTGCGGGACGAGTTGGACGGAAAGATTGGAT AAACTTAGCATACGGGGCTCTAATCAATATCATAGTTGGCGCTGCACTTGCTCCAACAGCAGCAAAAGATTTACTAAGAA TGGCTGGTAGCGCTTTTGCCTGGGTGGTGGGACACTTACCACAAATTCCTTTTCCCGCATAA
Upstream 100 bases:
>100_bases GAGCTGAATAACTGTTCCATTTGGGGGGATGACCGGTTCACGCGCGCACGCGCGTGAACCGGTCAATTACGAGTTTGAAT AAGATAAACGGAGGTCTCGG
Downstream 100 bases:
>100_bases GTTCGGAACAAGTCGGAGTAAAAGAGATTCCAACTCTCGCGTGGACACGATCTCGGCTAAAAAGCGTTGCCGCGCTGATC ACGCTCATAGCCGTTAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSEHRLLTSQRNMLFTAIQNNGLDPASFHWEMANSFNQHNLIVPRLIHVQSDGYFQFELQNDVEWCQYSPGQTKYIEQQY PGNWNGQYSYFCCWLSYLKEEFETPDLWSVIAGDSSFEVNMKSDGNEDESNKKFNSSERKHISQNLNEIREYLVTAHSIS GSSLRLIEERLKYLEDAAGRVGRKDWINLAYGALINIIVGAALAPTAAKDLLRMAGSAFAWVVGHLPQIPFPA
Sequences:
>Translated_233_residues MSEHRLLTSQRNMLFTAIQNNGLDPASFHWEMANSFNQHNLIVPRLIHVQSDGYFQFELQNDVEWCQYSPGQTKYIEQQY PGNWNGQYSYFCCWLSYLKEEFETPDLWSVIAGDSSFEVNMKSDGNEDESNKKFNSSERKHISQNLNEIREYLVTAHSIS GSSLRLIEERLKYLEDAAGRVGRKDWINLAYGALINIIVGAALAPTAAKDLLRMAGSAFAWVVGHLPQIPFPA >Mature_232_residues SEHRLLTSQRNMLFTAIQNNGLDPASFHWEMANSFNQHNLIVPRLIHVQSDGYFQFELQNDVEWCQYSPGQTKYIEQQYP GNWNGQYSYFCCWLSYLKEEFETPDLWSVIAGDSSFEVNMKSDGNEDESNKKFNSSERKHISQNLNEIREYLVTAHSISG SSLRLIEERLKYLEDAAGRVGRKDWINLAYGALINIIVGAALAPTAAKDLLRMAGSAFAWVVGHLPQIPFPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26617; Mature: 26486
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHRLLTSQRNMLFTAIQNNGLDPASFHWEMANSFNQHNLIVPRLIHVQSDGYFQFELQ CCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEEEC NDVEWCQYSPGQTKYIEQQYPGNWNGQYSYFCCWLSYLKEEFETPDLWSVIAGDSSFEVN CCCHHHHCCCCCCCEEHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEECCCCEEEE MKSDGNEDESNKKFNSSERKHISQNLNEIREYLVTAHSISGSSLRLIEERLKYLEDAAGR ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC VGRKDWINLAYGALINIIVGAALAPTAAKDLLRMAGSAFAWVVGHLPQIPFPA CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCC >Mature Secondary Structure SEHRLLTSQRNMLFTAIQNNGLDPASFHWEMANSFNQHNLIVPRLIHVQSDGYFQFELQ CCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEEEC NDVEWCQYSPGQTKYIEQQYPGNWNGQYSYFCCWLSYLKEEFETPDLWSVIAGDSSFEVN CCCHHHHCCCCCCCEEHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEECCCCEEEE MKSDGNEDESNKKFNSSERKHISQNLNEIREYLVTAHSISGSSLRLIEERLKYLEDAAGR ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC VGRKDWINLAYGALINIIVGAALAPTAAKDLLRMAGSAFAWVVGHLPQIPFPA CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA