Definition Geobacter lovleyi SZ chromosome, complete genome.
Accession NC_010814
Length 3,917,761

Click here to switch to the map view.

The map label for this gene is 189424284

Identifier: 189424284

GI number: 189424284

Start: 1264699

End: 1265340

Strand: Reverse

Name: 189424284

Synonym: Glov_1219

Alternate gene names: NA

Gene position: 1265340-1264699 (Counterclockwise)

Preceding gene: 189424285

Following gene: 189424283

Centisome position: 32.3

GC content: 57.48

Gene sequence:

>642_bases
ATGCAATGCCAGTTCTGCAAGGCTCAGGTTCCAAACGGCAGCACCAAATGTCCCCAGTGTGGCACCGTCCTCCCTGCTTC
ACCCCGAATCACTGCCGGTGATTTCGGGGCCAGCTTTAGCAACGCCACCACCATCTGGAAGGATAACCTGGGTGACCTGG
TCTTGCTGACACTGGTCTTCTGCCTGGTGGCCTGGGTGCCCATAGCCAACGCCGGCTTCATTGCCGGGTACACCCGCTCA
TTGATGAAGGTCTTCCGTGGTCAGGGCAAGGCCGCTGTGGGTGATATCTTTAATGCCTGGGACTGTTTCGGCAACCTGCT
GGTCTATCTGGTGTTGTACCTTGTCGCCGTGGTGCTGCTCTCCTTTATTCCGTTTCTGGGCACCCTGGCCGTGCTTGCCC
TCTACTTTGTTGCCGCACCCGGTATGCTGGCGGTTATTGACAAGCGGCTCAGCGCCATTGATGCCTTTAAATGGAGCCTT
GCCACCATCCAGAAAGATGCTGTCAACTGGCTGCTGGCCATTCTGGTGGGGGGCATTCTGGGCAGTGCCGGAGCAATCGC
CCTGGGAATCGGCATCATCATCACCATCCCCTGGGGACAGTTACTGCTGATCAGCCAGTATGAGGCACGCAAGGCAGACT
AA

Upstream 100 bases:

>100_bases
CGGATGACCACAGCTTGAGGTTTATGATTCGGATGGTAGAATACTGACAGACTGGTGGCCAAAGGGTCATCAGATATCAC
GGTTTGAGGAGGTCGTAACC

Downstream 100 bases:

>100_bases
GATCAAGGCGTTCACCTGCAGCACCCGTTAACCAGACAACCTGATCACGATGCCATCCAGACCTGCGGCATCGTGATCAG
GTTTCCATATTGTCATCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MQCQFCKAQVPNGSTKCPQCGTVLPASPRITAGDFGASFSNATTIWKDNLGDLVLLTLVFCLVAWVPIANAGFIAGYTRS
LMKVFRGQGKAAVGDIFNAWDCFGNLLVYLVLYLVAVVLLSFIPFLGTLAVLALYFVAAPGMLAVIDKRLSAIDAFKWSL
ATIQKDAVNWLLAILVGGILGSAGAIALGIGIIITIPWGQLLLISQYEARKAD

Sequences:

>Translated_213_residues
MQCQFCKAQVPNGSTKCPQCGTVLPASPRITAGDFGASFSNATTIWKDNLGDLVLLTLVFCLVAWVPIANAGFIAGYTRS
LMKVFRGQGKAAVGDIFNAWDCFGNLLVYLVLYLVAVVLLSFIPFLGTLAVLALYFVAAPGMLAVIDKRLSAIDAFKWSL
ATIQKDAVNWLLAILVGGILGSAGAIALGIGIIITIPWGQLLLISQYEARKAD
>Mature_213_residues
MQCQFCKAQVPNGSTKCPQCGTVLPASPRITAGDFGASFSNATTIWKDNLGDLVLLTLVFCLVAWVPIANAGFIAGYTRS
LMKVFRGQGKAAVGDIFNAWDCFGNLLVYLVLYLVAVVLLSFIPFLGTLAVLALYFVAAPGMLAVIDKRLSAIDAFKWSL
ATIQKDAVNWLLAILVGGILGSAGAIALGIGIIITIPWGQLLLISQYEARKAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22659; Mature: 22659

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCQFCKAQVPNGSTKCPQCGTVLPASPRITAGDFGASFSNATTIWKDNLGDLVLLTLVF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHH
CLVAWVPIANAGFIAGYTRSLMKVFRGQGKAAVGDIFNAWDCFGNLLVYLVLYLVAVVLL
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFIPFLGTLAVLALYFVAAPGMLAVIDKRLSAIDAFKWSLATIQKDAVNWLLAILVGGIL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSAGAIALGIGIIITIPWGQLLLISQYEARKAD
CCCHHHHHHHHHEEECCCCCEEEEECHHHCCCC
>Mature Secondary Structure
MQCQFCKAQVPNGSTKCPQCGTVLPASPRITAGDFGASFSNATTIWKDNLGDLVLLTLVF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHH
CLVAWVPIANAGFIAGYTRSLMKVFRGQGKAAVGDIFNAWDCFGNLLVYLVLYLVAVVLL
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFIPFLGTLAVLALYFVAAPGMLAVIDKRLSAIDAFKWSLATIQKDAVNWLLAILVGGIL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSAGAIALGIGIIITIPWGQLLLISQYEARKAD
CCCHHHHHHHHHEEECCCCCEEEEECHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA