| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is 189424269
Identifier: 189424269
GI number: 189424269
Start: 1248650
End: 1249861
Strand: Reverse
Name: 189424269
Synonym: Glov_1204
Alternate gene names: NA
Gene position: 1249861-1248650 (Counterclockwise)
Preceding gene: 189424270
Following gene: 189424268
Centisome position: 31.9
GC content: 54.46
Gene sequence:
>1212_bases ATGACTAAAATCGGTAAAGTAAGCGCTGCAGCCGCACTGATGCTGGGCCTGGCCGCACCGGCCATGGCCGGCCCCCAGAT AACCTTCGGGCCTGATGATAAAGGGGTGCTGCAAATTGACTATAAGGGCCAGTTCCAGATGACTGTCCGTGACAGCGGTT CAGGCACCAACAACGATGACACAACCACCAACTTCAACTTCCGCCGGAACCGGCTGGCCCTGATGGGGGCCTATGGCGAT ATGATGAGCCTGTATGTGCAGACGGAGTTTGTGGACCAGACCAGCATCAACACTCTGGGAGTCAACAGTACGCCGACCAA CCCTGAATTCACGATCCTGGATGCGGTTGTACGTTTTAACCTGCATGACGCCTTCAATGTCAATGTCGGTAAATTCAAGT ACAATTTCTCGCGTGAGAACCTGGAGGCCTGTGAAATGCCTCTGACGCTGGACCGTTCCCTGTTCATCCGCGCCCCCTTT GTGACCACCCGTGACATGGGTCTGGCAGTCTGGGGCAACGTGTACAAGGATATGTTCCAGTACCGGCTTGACGTCATGGA AGGGCGGAAAGCGGCTTCCGGCGAGAGTGCTCCCAAATCCAACTTCCGCTACACCATGCGGGCCCATGCCTCGCTGCTTG ATCCGGAGAACGACTATGGCTACAAGGGGACCTATCTGGGCAAAAAGAAGGTTTTGACCATCGGCGGTGCCATGCAGTAT GAACCGAAGGTTGCCTACAGCAACGTGGCAGCAAAAACCGGTGAAAAGGATTATTACGCCTGGACCCTGGACGGTTTCTT TGAGTATCCGGTTAAAGATATGGGCACCATTACCGTTTCCGGTGCCTACGCCAACTACAAGCTGGACAACGCCTATCTGG GCGCCAACCCCGACACGAACACCATCGGACTGAACGGGGAGAAAAACGGCTGGTACCTCAAGGGAGGCTACATGCTGCCC AACCTGCCGCTGCAACTCTTCGGCCGCTACGAAAAGTGGAAATTTGCCCAACTGAACAACATTTACGACCAGCGGGTTGA CTGGGCCGGCGTCGGTGCCAACTACTACATCTGGGGCCAGAACCTGAAGGTTACCATGGAGTACGGCATGACCATGTTTG ACAAGAAGGGTACCTACAGCGGTCCGGATGGTACCAATGTACGGACCAAAGACTTCAACACCTTTATTACCCAGCTACAG GTGATTTTCTAA
Upstream 100 bases:
>100_bases GTGGCGGCGGCGGTGGCACCGGCAGCGGCTGCTGATCCAGCCGTAGAGTCCATCGGATAACCAGTCTATGACTCAGCACA TATCAAAGGAGAAATCTTCT
Downstream 100 bases:
>100_bases CCATGCCAAGCCCGGTCGGGGGGAACGTGTTACCCCCTGACCGGACAACAACCAGATCAGGAGCCTACATGAATGTTCTG AAACTGCTTCCTGCCTTGAT
Product: phosphate-selective porin O and P
Products: NA
Alternate protein names: Outer Membrane Porin FmdC
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MTKIGKVSAAAALMLGLAAPAMAGPQITFGPDDKGVLQIDYKGQFQMTVRDSGSGTNNDDTTTNFNFRRNRLALMGAYGD MMSLYVQTEFVDQTSINTLGVNSTPTNPEFTILDAVVRFNLHDAFNVNVGKFKYNFSRENLEACEMPLTLDRSLFIRAPF VTTRDMGLAVWGNVYKDMFQYRLDVMEGRKAASGESAPKSNFRYTMRAHASLLDPENDYGYKGTYLGKKKVLTIGGAMQY EPKVAYSNVAAKTGEKDYYAWTLDGFFEYPVKDMGTITVSGAYANYKLDNAYLGANPDTNTIGLNGEKNGWYLKGGYMLP NLPLQLFGRYEKWKFAQLNNIYDQRVDWAGVGANYYIWGQNLKVTMEYGMTMFDKKGTYSGPDGTNVRTKDFNTFITQLQ VIF
Sequences:
>Translated_403_residues MTKIGKVSAAAALMLGLAAPAMAGPQITFGPDDKGVLQIDYKGQFQMTVRDSGSGTNNDDTTTNFNFRRNRLALMGAYGD MMSLYVQTEFVDQTSINTLGVNSTPTNPEFTILDAVVRFNLHDAFNVNVGKFKYNFSRENLEACEMPLTLDRSLFIRAPF VTTRDMGLAVWGNVYKDMFQYRLDVMEGRKAASGESAPKSNFRYTMRAHASLLDPENDYGYKGTYLGKKKVLTIGGAMQY EPKVAYSNVAAKTGEKDYYAWTLDGFFEYPVKDMGTITVSGAYANYKLDNAYLGANPDTNTIGLNGEKNGWYLKGGYMLP NLPLQLFGRYEKWKFAQLNNIYDQRVDWAGVGANYYIWGQNLKVTMEYGMTMFDKKGTYSGPDGTNVRTKDFNTFITQLQ VIF >Mature_402_residues TKIGKVSAAAALMLGLAAPAMAGPQITFGPDDKGVLQIDYKGQFQMTVRDSGSGTNNDDTTTNFNFRRNRLALMGAYGDM MSLYVQTEFVDQTSINTLGVNSTPTNPEFTILDAVVRFNLHDAFNVNVGKFKYNFSRENLEACEMPLTLDRSLFIRAPFV TTRDMGLAVWGNVYKDMFQYRLDVMEGRKAASGESAPKSNFRYTMRAHASLLDPENDYGYKGTYLGKKKVLTIGGAMQYE PKVAYSNVAAKTGEKDYYAWTLDGFFEYPVKDMGTITVSGAYANYKLDNAYLGANPDTNTIGLNGEKNGWYLKGGYMLPN LPLQLFGRYEKWKFAQLNNIYDQRVDWAGVGANYYIWGQNLKVTMEYGMTMFDKKGTYSGPDGTNVRTKDFNTFITQLQV IF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45173; Mature: 45042
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIGKVSAAAALMLGLAAPAMAGPQITFGPDDKGVLQIDYKGQFQMTVRDSGSGTNNDD CCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCCC TTTNFNFRRNRLALMGAYGDMMSLYVQTEFVDQTSINTLGVNSTPTNPEFTILDAVVRFN CCEECEEECCEEEEEECCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCEEEEEEEHEEC LHDAFNVNVGKFKYNFSRENLEACEMPLTLDRSLFIRAPFVTTRDMGLAVWGNVYKDMFQ CCCEEECEEEEEEEECCCCCHHHHCCCEEECCEEEEEECCEEECCCCCHHHHHHHHHHHH YRLDVMEGRKAASGESAPKSNFRYTMRAHASLLDPENDYGYKGTYLGKKKVLTIGGAMQY HHHHHHCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCEEEECCEEEEEECCCEEE EPKVAYSNVAAKTGEKDYYAWTLDGFFEYPVKDMGTITVSGAYANYKLDNAYLGANPDTN CCCEEECCHHHCCCCCCEEEEEECCEEECCCCCCCEEEEEEEEEEEEECCEEECCCCCCC TIGLNGEKNGWYLKGGYMLPNLPLQLFGRYEKWKFAQLNNIYDQRVDWAGVGANYYIWGQ EEECCCCCCCEEEECCEECCCCCHHHCCCCCCEEEHHHHHHHHHCCCEEECCCEEEEECC NLKVTMEYGMTMFDKKGTYSGPDGTNVRTKDFNTFITQLQVIF CEEEEEECCCEEEECCCCCCCCCCCCEEECHHHHEEEEEEEEC >Mature Secondary Structure TKIGKVSAAAALMLGLAAPAMAGPQITFGPDDKGVLQIDYKGQFQMTVRDSGSGTNNDD CCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCCC TTTNFNFRRNRLALMGAYGDMMSLYVQTEFVDQTSINTLGVNSTPTNPEFTILDAVVRFN CCEECEEECCEEEEEECCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCEEEEEEEHEEC LHDAFNVNVGKFKYNFSRENLEACEMPLTLDRSLFIRAPFVTTRDMGLAVWGNVYKDMFQ CCCEEECEEEEEEEECCCCCHHHHCCCEEECCEEEEEECCEEECCCCCHHHHHHHHHHHH YRLDVMEGRKAASGESAPKSNFRYTMRAHASLLDPENDYGYKGTYLGKKKVLTIGGAMQY HHHHHHCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCEEEECCEEEEEECCCEEE EPKVAYSNVAAKTGEKDYYAWTLDGFFEYPVKDMGTITVSGAYANYKLDNAYLGANPDTN CCCEEECCHHHCCCCCCEEEEEECCEEECCCCCCCEEEEEEEEEEEEECCEEECCCCCCC TIGLNGEKNGWYLKGGYMLPNLPLQLFGRYEKWKFAQLNNIYDQRVDWAGVGANYYIWGQ EEECCCCCCCEEEECCEECCCCCHHHCCCCCCEEEHHHHHHHHHCCCEEECCCEEEEECC NLKVTMEYGMTMFDKKGTYSGPDGTNVRTKDFNTFITQLQVIF CEEEEEECCCEEEECCCCCCCCCCCCEEECHHHHEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA