| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424266
Identifier: 189424266
GI number: 189424266
Start: 1246900
End: 1247865
Strand: Reverse
Name: 189424266
Synonym: Glov_1201
Alternate gene names: NA
Gene position: 1247865-1246900 (Counterclockwise)
Preceding gene: 189424267
Following gene: 189424265
Centisome position: 31.85
GC content: 55.07
Gene sequence:
>966_bases ATGCACCTATTTCGTACTACAGTTCTGGCCTGCCTGGCACTTAGTACCTTTGCCGTAGCGGCGCTTGCCGCTCCTGTCGG TGTTGGCCGCGACGCCACCCTTGCTTCGCAGCCCAAGGCCAACAGTATTGCCGAACTGGTGGCACGCTATGACTCCAGTT CCTGCATCGGCTGCCATCAGCAGGCCCATGACGAATGGGCAAAATCGATCCACGCCCGCTCTATCTTTGGCACAGGACGT ACTGCAGCCACCTTCAGGACCGCTATCATCAACGGCGCAATGGATTGGCCCGCCTCCGGTGTCAAGTCACCCAAGGATGT CAAGGTTGAACACCTGCAGGGCTGTACCAAGTGTCACCTGCCCCAACTGGCTGATGCAACCGACAAGGTTGCTCAGGAAA TCGTGACCACGCTCTGGGATTGGGATGCCGCCATTAAAAAGGAAGATACCGACAAGGCAGAAAAACTTGAGAAGACCCTT TCCTCACTTAATATTAACTGCCTGATCTGCCACAACCGTAATGCCATTACCCACAAGTGGTCTGAAGGCTACCCCAAAAA GGATACGGTCTACGGCAGCAAGTCAGGCGAGCATATGGATGGCAAGTTCACCAAAATGGCCAAAGGGCAGATCATGTCTG AATCGATCATGTGTGGCCAGTGTCACGGACAGGGCCCCAACTTTGATCAGGAAAACCCGACCCAGTGTGCAACCGGCTAT GCCAGCTACCTGATGGCCTATATACCGGAAGGGGGCAACAAGAGCTGCCAGCAGTGCCATATGCGTGAGAGCAAGCTGGG CCATAACATGCAGAGTTACCGCTCCAAGGAGATGGCTCAAAAGGCGGTTGAGATGCATGTGGAAACCAACTCGGTCTACT GGCGGGATAACACGACTATCCGTCCCAAGGCAGCGGTACGGATTGAGCTGACCAACAAGGCCGGTCACGGCATACCCGAT GGCTGA
Upstream 100 bases:
>100_bases GAAGGCTGGCGACACAGTCAAGGTGGACAAGGCAGCGGCAGCCCTGCAAGGCTGCTAAACCAGACATGGCAGCTTTAATG ATTCACGGGGAGTAATCACT
Downstream 100 bases:
>100_bases CCGACCCCCAACCGACTGGTTCTGTCGGTAAAAGCAAAAGACAAGAGTGGCAAGGAAGTATTCAACGCAGAACGTATATT CATGCCGATTCCTCAGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome C
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MHLFRTTVLACLALSTFAVAALAAPVGVGRDATLASQPKANSIAELVARYDSSSCIGCHQQAHDEWAKSIHARSIFGTGR TAATFRTAIINGAMDWPASGVKSPKDVKVEHLQGCTKCHLPQLADATDKVAQEIVTTLWDWDAAIKKEDTDKAEKLEKTL SSLNINCLICHNRNAITHKWSEGYPKKDTVYGSKSGEHMDGKFTKMAKGQIMSESIMCGQCHGQGPNFDQENPTQCATGY ASYLMAYIPEGGNKSCQQCHMRESKLGHNMQSYRSKEMAQKAVEMHVETNSVYWRDNTTIRPKAAVRIELTNKAGHGIPD G
Sequences:
>Translated_321_residues MHLFRTTVLACLALSTFAVAALAAPVGVGRDATLASQPKANSIAELVARYDSSSCIGCHQQAHDEWAKSIHARSIFGTGR TAATFRTAIINGAMDWPASGVKSPKDVKVEHLQGCTKCHLPQLADATDKVAQEIVTTLWDWDAAIKKEDTDKAEKLEKTL SSLNINCLICHNRNAITHKWSEGYPKKDTVYGSKSGEHMDGKFTKMAKGQIMSESIMCGQCHGQGPNFDQENPTQCATGY ASYLMAYIPEGGNKSCQQCHMRESKLGHNMQSYRSKEMAQKAVEMHVETNSVYWRDNTTIRPKAAVRIELTNKAGHGIPD G >Mature_321_residues MHLFRTTVLACLALSTFAVAALAAPVGVGRDATLASQPKANSIAELVARYDSSSCIGCHQQAHDEWAKSIHARSIFGTGR TAATFRTAIINGAMDWPASGVKSPKDVKVEHLQGCTKCHLPQLADATDKVAQEIVTTLWDWDAAIKKEDTDKAEKLEKTL SSLNINCLICHNRNAITHKWSEGYPKKDTVYGSKSGEHMDGKFTKMAKGQIMSESIMCGQCHGQGPNFDQENPTQCATGY ASYLMAYIPEGGNKSCQQCHMRESKLGHNMQSYRSKEMAQKAVEMHVETNSVYWRDNTTIRPKAAVRIELTNKAGHGIPD G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35160; Mature: 35160
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLFRTTVLACLALSTFAVAALAAPVGVGRDATLASQPKANSIAELVARYDSSSCIGCHQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHH QAHDEWAKSIHARSIFGTGRTAATFRTAIINGAMDWPASGVKSPKDVKVEHLQGCTKCHL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHHCCC PQLADATDKVAQEIVTTLWDWDAAIKKEDTDKAEKLEKTLSSLNINCLICHNRNAITHKW CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCC SEGYPKKDTVYGSKSGEHMDGKFTKMAKGQIMSESIMCGQCHGQGPNFDQENPTQCATGY CCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHEECCCCCCCCCCCCCCCHHHHHHH ASYLMAYIPEGGNKSCQQCHMRESKLGHNMQSYRSKEMAQKAVEMHVETNSVYWRDNTTI HHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCEEEECCCCEE RPKAAVRIELTNKAGHGIPDG CCCEEEEEEEECCCCCCCCCC >Mature Secondary Structure MHLFRTTVLACLALSTFAVAALAAPVGVGRDATLASQPKANSIAELVARYDSSSCIGCHQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHH QAHDEWAKSIHARSIFGTGRTAATFRTAIINGAMDWPASGVKSPKDVKVEHLQGCTKCHL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHHCCC PQLADATDKVAQEIVTTLWDWDAAIKKEDTDKAEKLEKTLSSLNINCLICHNRNAITHKW CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCC SEGYPKKDTVYGSKSGEHMDGKFTKMAKGQIMSESIMCGQCHGQGPNFDQENPTQCATGY CCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHEECCCCCCCCCCCCCCCHHHHHHH ASYLMAYIPEGGNKSCQQCHMRESKLGHNMQSYRSKEMAQKAVEMHVETNSVYWRDNTTI HHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCEEEECCCCEE RPKAAVRIELTNKAGHGIPDG CCCEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA