| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424264
Identifier: 189424264
GI number: 189424264
Start: 1244535
End: 1246397
Strand: Reverse
Name: 189424264
Synonym: Glov_1199
Alternate gene names: NA
Gene position: 1246397-1244535 (Counterclockwise)
Preceding gene: 189424265
Following gene: 189424263
Centisome position: 31.81
GC content: 59.37
Gene sequence:
>1863_bases ATGCTGTCCCAAATTACCATGCGCATATTTTTTTTCTTCATACTTTTGATTTTAAGTACTTTTTCACTTATGGGCTGTTC TCCGCGCAACGCCCAACATGAACAGTGCTTATCCTGCCACAAGGGGATCGAACAGACCTCTTCCAGCCACAGTGGTTGTG TAACCTGTCACGGCGGCAATCCTGCAGCCAAGACCAAAGCAGAGGCACATCGCGGCATCTACGGTCTGTCAAACCGCTCC TATACCGGCCGCTGGGAATCGGGGTGCGGCCCCTGCCACCGTCACCAGCTTGAGCGGATGCAGAGCAGCCAGATGTTTAC CGCGGCAGGCATGATTGCCCAGATCCAGGCCACCTGGGAGGGCGAACGCCCCGGTATCCGCTACGGCAGCCAGGCAGCGC AGTTATATGACACTGACGGCAAAGCGCTTAAGCAGCAGGAGGTCGCTCAACTGGACAACCTGTCAGGAGAACTGTACCGC AAGTTCTGCGCCCGCTGCCATCTGGCCAGACATCAGGACCCGGGCAACGGTGCCGGCAACCCGGCCGGATGCGCCGCCTG CCACTTCCCCTATGAGGCCCAGGCCACCTACAACGGAGGCGATCCAACCATGCGGGGTAAATCACCCCATGGCTCCAGCC ATGCCATGCATGCGCTGCCGTCGCTGCAATCCTGTGCCCAGTGCCACCACCGCAGCGGGCGGACAGCCCTCTCCTACCAG GGTCTGATGGACGGCAACAACGGCATGGTTCCCACCCGCAACGGACAGCCGGGACCGGTCAGGGGCAGCGATCTGCGCAA CTTTACCCATATCGCCCCGGATATCCATTACACTGCCGGTATGGACTGTATTGACTGCCACACCTCACGGGAAGTCATGG GGGAGGGCTATGCCTCAGCCAGCCTGCACGGGCAGCTTGAGGTCACCTGTGAAGACTGTCACGGCTCTGTTGACAGACCA CCCCGCTACCGTGCCATTCTCCGCGAAAATGAAGATCCGGTTCGGGAATCCCGTTCCTACCCGCTGCAGATGCGGCCAGG CATGGAGATGATCCTGACCTCCAAAGGGCGCCCTTTCTCAAACGTCTTTCATGTTGACGGTAATGTCGTGGTACAGGTCA AGCAGAGCGGCAGACTGCTCCGTTCTAAAATCATAACCGGCACACCTGAACATACAGTGACCGGACATGGACGCCTGACC TGCACTGCCTGTCACTCCCGGACTGTGGTGCAGTGTTACGGCTGCCATACCCGGTATGACCGGGAAAATACCCAGATGGA TTTTATCAAGGGGGTAGAGACACCGGGACAGTTCAGCGAGACCGAGGATTACCGCACCCTCTACCCGTTTCCCCTGGCCC TGAATCAGAAAGGCCGGATCTCGCCGGTCACCCCCGGCTGCCAGACCTTCGTGACCGTGGTTGATGAGCAGGGCACGGTG TTGCAGAATGAGGCGATCATGCAGTACAAAGGCAAGCGCCAGCTGCGCTTCGCACCGTTCCACGGCCACAACACCGGCAG GCAGGCCGTGGGATGCGCCCAGTGCCACGCCAACCCCGCCTTCCTGGGATTCGGCCAGCATATTGTCGAGGGACGCAGCA TCAAAGGGACCTTAATCTGCGAGCTTTCAGACAACAAGCCGCTGGACGGTTATCTGACCATGCACAAGGGACAGGTACAG GCCTACTCGGCCATCACCCGCGCAAACGCCCGGCCGCTCAACCAGCAGGAAGTGCAACGCACCCTGCAGGTCAACCTCTG TCTGGTCTGCCACACATCGGCCAAAGACCCGATCTACCGGAAAAGGATCAACTACCGTGACCTGGACGATACCGTTCATC GCCGCCTGCTGGCTCCTCGTTAG
Upstream 100 bases:
>100_bases TACTCACCTATCCCTCCTTCATGTGGTGCCGGCGGCTCAAACCGCCGGCTTTTTTCTGCAGATATCATCCTGTCACTGGC AAGATTCCCGGTCTGCTGCT
Downstream 100 bases:
>100_bases CTGCCTCACTGCCGGGGCTGCCGATCAGTGCCGGCTCTGCCACGCTGCCGGCATACAGATCAGTGGTATTCACAGCAGGG TGGCCTGTCAAGACTGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Multiheme C-Type Cytochrome; Lipoprotein Cytochrome C
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MLSQITMRIFFFFILLILSTFSLMGCSPRNAQHEQCLSCHKGIEQTSSSHSGCVTCHGGNPAAKTKAEAHRGIYGLSNRS YTGRWESGCGPCHRHQLERMQSSQMFTAAGMIAQIQATWEGERPGIRYGSQAAQLYDTDGKALKQQEVAQLDNLSGELYR KFCARCHLARHQDPGNGAGNPAGCAACHFPYEAQATYNGGDPTMRGKSPHGSSHAMHALPSLQSCAQCHHRSGRTALSYQ GLMDGNNGMVPTRNGQPGPVRGSDLRNFTHIAPDIHYTAGMDCIDCHTSREVMGEGYASASLHGQLEVTCEDCHGSVDRP PRYRAILRENEDPVRESRSYPLQMRPGMEMILTSKGRPFSNVFHVDGNVVVQVKQSGRLLRSKIITGTPEHTVTGHGRLT CTACHSRTVVQCYGCHTRYDRENTQMDFIKGVETPGQFSETEDYRTLYPFPLALNQKGRISPVTPGCQTFVTVVDEQGTV LQNEAIMQYKGKRQLRFAPFHGHNTGRQAVGCAQCHANPAFLGFGQHIVEGRSIKGTLICELSDNKPLDGYLTMHKGQVQ AYSAITRANARPLNQQEVQRTLQVNLCLVCHTSAKDPIYRKRINYRDLDDTVHRRLLAPR
Sequences:
>Translated_620_residues MLSQITMRIFFFFILLILSTFSLMGCSPRNAQHEQCLSCHKGIEQTSSSHSGCVTCHGGNPAAKTKAEAHRGIYGLSNRS YTGRWESGCGPCHRHQLERMQSSQMFTAAGMIAQIQATWEGERPGIRYGSQAAQLYDTDGKALKQQEVAQLDNLSGELYR KFCARCHLARHQDPGNGAGNPAGCAACHFPYEAQATYNGGDPTMRGKSPHGSSHAMHALPSLQSCAQCHHRSGRTALSYQ GLMDGNNGMVPTRNGQPGPVRGSDLRNFTHIAPDIHYTAGMDCIDCHTSREVMGEGYASASLHGQLEVTCEDCHGSVDRP PRYRAILRENEDPVRESRSYPLQMRPGMEMILTSKGRPFSNVFHVDGNVVVQVKQSGRLLRSKIITGTPEHTVTGHGRLT CTACHSRTVVQCYGCHTRYDRENTQMDFIKGVETPGQFSETEDYRTLYPFPLALNQKGRISPVTPGCQTFVTVVDEQGTV LQNEAIMQYKGKRQLRFAPFHGHNTGRQAVGCAQCHANPAFLGFGQHIVEGRSIKGTLICELSDNKPLDGYLTMHKGQVQ AYSAITRANARPLNQQEVQRTLQVNLCLVCHTSAKDPIYRKRINYRDLDDTVHRRLLAPR >Mature_620_residues MLSQITMRIFFFFILLILSTFSLMGCSPRNAQHEQCLSCHKGIEQTSSSHSGCVTCHGGNPAAKTKAEAHRGIYGLSNRS YTGRWESGCGPCHRHQLERMQSSQMFTAAGMIAQIQATWEGERPGIRYGSQAAQLYDTDGKALKQQEVAQLDNLSGELYR KFCARCHLARHQDPGNGAGNPAGCAACHFPYEAQATYNGGDPTMRGKSPHGSSHAMHALPSLQSCAQCHHRSGRTALSYQ GLMDGNNGMVPTRNGQPGPVRGSDLRNFTHIAPDIHYTAGMDCIDCHTSREVMGEGYASASLHGQLEVTCEDCHGSVDRP PRYRAILRENEDPVRESRSYPLQMRPGMEMILTSKGRPFSNVFHVDGNVVVQVKQSGRLLRSKIITGTPEHTVTGHGRLT CTACHSRTVVQCYGCHTRYDRENTQMDFIKGVETPGQFSETEDYRTLYPFPLALNQKGRISPVTPGCQTFVTVVDEQGTV LQNEAIMQYKGKRQLRFAPFHGHNTGRQAVGCAQCHANPAFLGFGQHIVEGRSIKGTLICELSDNKPLDGYLTMHKGQVQ AYSAITRANARPLNQQEVQRTLQVNLCLVCHTSAKDPIYRKRINYRDLDDTVHRRLLAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68678; Mature: 68678
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSQITMRIFFFFILLILSTFSLMGCSPRNAQHEQCLSCHKGIEQTSSSHSGCVTCHGGN CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCC PAAKTKAEAHRGIYGLSNRSYTGRWESGCGPCHRHQLERMQSSQMFTAAGMIAQIQATWE CCHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECC GERPGIRYGSQAAQLYDTDGKALKQQEVAQLDNLSGELYRKFCARCHLARHQDPGNGAGN CCCCCCCCCCCHHEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC PAGCAACHFPYEAQATYNGGDPTMRGKSPHGSSHAMHALPSLQSCAQCHHRSGRTALSYQ CCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEC GLMDGNNGMVPTRNGQPGPVRGSDLRNFTHIAPDIHYTAGMDCIDCHTSREVMGEGYASA CEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCEECCCCHHHHCCCCCCC SLHGQLEVTCEDCHGSVDRPPRYRAILRENEDPVRESRSYPLQMRPGMEMILTSKGRPFS EECCEEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHCCCCEEECCCCEEEEECCCCCCC NVFHVDGNVVVQVKQSGRLLRSKIITGTPEHTVTGHGRLTCTACHSRTVVQCYGCHTRYD CEEEECCCEEEEECCCCHHHHHHHCCCCCCCEECCCCEEEEEECCCCCEEEEECCCCCCC RENTQMDFIKGVETPGQFSETEDYRTLYPFPLALNQKGRISPVTPGCQTFVTVVDEQGTV CCCCCCHHHHCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCHHEEEEEECCCCCE LQNEAIMQYKGKRQLRFAPFHGHNTGRQAVGCAQCHANPAFLGFGQHIVEGRSIKGTLIC ECCCHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCEEECCHHHHCCCCCCEEEEE ELSDNKPLDGYLTMHKGQVQAYSAITRANARPLNQQEVQRTLQVNLCLVCHTSAKDPIYR EECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEEEECCCCCCHHH KRINYRDLDDTVHRRLLAPR HCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MLSQITMRIFFFFILLILSTFSLMGCSPRNAQHEQCLSCHKGIEQTSSSHSGCVTCHGGN CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCC PAAKTKAEAHRGIYGLSNRSYTGRWESGCGPCHRHQLERMQSSQMFTAAGMIAQIQATWE CCHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECC GERPGIRYGSQAAQLYDTDGKALKQQEVAQLDNLSGELYRKFCARCHLARHQDPGNGAGN CCCCCCCCCCCHHEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC PAGCAACHFPYEAQATYNGGDPTMRGKSPHGSSHAMHALPSLQSCAQCHHRSGRTALSYQ CCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEC GLMDGNNGMVPTRNGQPGPVRGSDLRNFTHIAPDIHYTAGMDCIDCHTSREVMGEGYASA CEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCEECCCCHHHHCCCCCCC SLHGQLEVTCEDCHGSVDRPPRYRAILRENEDPVRESRSYPLQMRPGMEMILTSKGRPFS EECCEEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHCCCCEEECCCCEEEEECCCCCCC NVFHVDGNVVVQVKQSGRLLRSKIITGTPEHTVTGHGRLTCTACHSRTVVQCYGCHTRYD CEEEECCCEEEEECCCCHHHHHHHCCCCCCCEECCCCEEEEEECCCCCEEEEECCCCCCC RENTQMDFIKGVETPGQFSETEDYRTLYPFPLALNQKGRISPVTPGCQTFVTVVDEQGTV CCCCCCHHHHCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCHHEEEEEECCCCCE LQNEAIMQYKGKRQLRFAPFHGHNTGRQAVGCAQCHANPAFLGFGQHIVEGRSIKGTLIC ECCCHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCEEECCHHHHCCCCCCEEEEE ELSDNKPLDGYLTMHKGQVQAYSAITRANARPLNQQEVQRTLQVNLCLVCHTSAKDPIYR EECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEEEECCCCCCHHH KRINYRDLDDTVHRRLLAPR HCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA