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The map label for this gene is qcrB [H]

Identifier: 189424261

GI number: 189424261

Start: 1242217

End: 1242837

Strand: Reverse

Name: qcrB [H]

Synonym: Glov_1196

Alternate gene names: 189424261

Gene position: 1242837-1242217 (Counterclockwise)

Preceding gene: 189424262

Following gene: 189424260

Centisome position: 31.72

GC content: 58.78

Gene sequence:

>621_bases
TTGTTCAAAGAGTTTCTCAAACACCTCTTTCCCAGAGTGGTACTGGAGCAGAATCTCAGGATCAGCTACACCCTCTGTCT
GGGCGGCCTGGCCTTTAGCAGCCTGCTGCTGCTGGCACTGTCCGGCCTGCTGCTGCTGTTCTACTATCGCCCCGGCGCTA
CAGAGGCCTACAACTCGATCATCTTTCTGGAGTCAGCGGTCTATGGCGGCCGGTACCTGCGCAGTCTGCACCGGATGACA
TCCCACCTCTTTCTTGTCCTGATCATGCTGCACACCCTGCGGGTGGTACTGACCGGCGCCTTTGCCCCGCCCCGTCAGCG
CAACTGGATTATCGGCATCTGCCTGCTGGGGCTGGCGGTCTTTGAGGCCTACACCGGGTACCTGCTGCCGATGGATCAGC
TGGCGCTCTGGGCCACCCAGACCGGCATGACCCTGCTGGAAACCATACCGCTGGGCAGTTTTCTGCGCGACATTCTGGTG
CCTGACACAGTGGGAGGACCATTATCCCTGATCCGCTTCTATGTGCTGCATGTGGTGGTGCTGCCGATGATCACCATCAC
GCTCTGTCTGTTGCATTTTTACCTGGTCCGCAAGCAGAAAGGGCTGCTCCCCTACCTATGA

Upstream 100 bases:

>100_bases
AATAGGCGACGCAGGCGTACACGCAGTACGTTGAGGAGCCGGTGACGAACCAACGAAGAGAGCGCCTTGAAATGGAATCG
GAATAAGGGAGGATTGCACC

Downstream 100 bases:

>100_bases
AGAACTACATCAAGAGCTCACCGCACTTTTTCCGCCTGATACTGCGTGCTTTCTGGCTTTGTACAGCAGCGCTACTGCTG
CTGGCAGCCCTGATCCCTGC

Product: cytochrome b/b6 domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MFKEFLKHLFPRVVLEQNLRISYTLCLGGLAFSSLLLLALSGLLLLFYYRPGATEAYNSIIFLESAVYGGRYLRSLHRMT
SHLFLVLIMLHTLRVVLTGAFAPPRQRNWIIGICLLGLAVFEAYTGYLLPMDQLALWATQTGMTLLETIPLGSFLRDILV
PDTVGGPLSLIRFYVLHVVVLPMITITLCLLHFYLVRKQKGLLPYL

Sequences:

>Translated_206_residues
MFKEFLKHLFPRVVLEQNLRISYTLCLGGLAFSSLLLLALSGLLLLFYYRPGATEAYNSIIFLESAVYGGRYLRSLHRMT
SHLFLVLIMLHTLRVVLTGAFAPPRQRNWIIGICLLGLAVFEAYTGYLLPMDQLALWATQTGMTLLETIPLGSFLRDILV
PDTVGGPLSLIRFYVLHVVVLPMITITLCLLHFYLVRKQKGLLPYL
>Mature_206_residues
MFKEFLKHLFPRVVLEQNLRISYTLCLGGLAFSSLLLLALSGLLLLFYYRPGATEAYNSIIFLESAVYGGRYLRSLHRMT
SHLFLVLIMLHTLRVVLTGAFAPPRQRNWIIGICLLGLAVFEAYTGYLLPMDQLALWATQTGMTLLETIPLGSFLRDILV
PDTVGGPLSLIRFYVLHVVVLPMITITLCLLHFYLVRKQKGLLPYL

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=203, Percent_Identity=30.5418719211823, Blast_Score=74, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 23333; Mature: 23333

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKEFLKHLFPRVVLEQNLRISYTLCLGGLAFSSLLLLALSGLLLLFYYRPGATEAYNSI
CHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IFLESAVYGGRYLRSLHRMTSHLFLVLIMLHTLRVVLTGAFAPPRQRNWIIGICLLGLAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
FEAYTGYLLPMDQLALWATQTGMTLLETIPLGSFLRDILVPDTVGGPLSLIRFYVLHVVV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LPMITITLCLLHFYLVRKQKGLLPYL
HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFKEFLKHLFPRVVLEQNLRISYTLCLGGLAFSSLLLLALSGLLLLFYYRPGATEAYNSI
CHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IFLESAVYGGRYLRSLHRMTSHLFLVLIMLHTLRVVLTGAFAPPRQRNWIIGICLLGLAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
FEAYTGYLLPMDQLALWATQTGMTLLETIPLGSFLRDILVPDTVGGPLSLIRFYVLHVVV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LPMITITLCLLHFYLVRKQKGLLPYL
HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7592464; 8760912; 9384377 [H]