Definition Geobacter lovleyi SZ chromosome, complete genome.
Accession NC_010814
Length 3,917,761

Click here to switch to the map view.

The map label for this gene is 189424230

Identifier: 189424230

GI number: 189424230

Start: 1219441

End: 1219767

Strand: Reverse

Name: 189424230

Synonym: Glov_1165

Alternate gene names: NA

Gene position: 1219767-1219441 (Counterclockwise)

Preceding gene: 189424231

Following gene: 189424229

Centisome position: 31.13

GC content: 55.66

Gene sequence:

>327_bases
ATGAAAAAGATGATCACATTGGTTGCAGTTGCACTCACGACACTGGCCTTGAGCAGTGGCGCCATGGCCGCTTCCTTTTC
CGGCAAGGTAACCAAAAATGACGGCGAACGGGTCACCCTGGAAGTGGCCAAAGGCGGACCAACCTGGGTAAAGAAGGGAT
CAGTGCTGTCTGCAGCCGGCGGTATGCCCACGGTGGTAGATGTGCAGGGAAAGCAGGTAACGTTGAAATTCAGCAAGGCC
AAGGCCGCCAAGATCAAACAGAACATGACCCTGTCGGTGAGCGAGCCTCCCAAGGGTACCGGCACTGAGGTTGTTGCTGG
CTGCTAA

Upstream 100 bases:

>100_bases
ACATTTCAATAATTTAAGTGTGTTACCTATTGGCACCGCACTTGCTTAAGTCACCTCCATCGATTTCACGTAAACATCCC
ACTATCAGGAGGAAAAACTT

Downstream 100 bases:

>100_bases
TAGCAACCTGGCGCCTTCCGATTCTTAATCGGAGGGCGTTTTTTGTACCCGAAAGGAGATTTACTTCATGCCGATTATGA
GCAGACGCTCCTTCCTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKKMITLVAVALTTLALSSGAMAASFSGKVTKNDGERVTLEVAKGGPTWVKKGSVLSAAGGMPTVVDVQGKQVTLKFSKA
KAAKIKQNMTLSVSEPPKGTGTEVVAGC

Sequences:

>Translated_108_residues
MKKMITLVAVALTTLALSSGAMAASFSGKVTKNDGERVTLEVAKGGPTWVKKGSVLSAAGGMPTVVDVQGKQVTLKFSKA
KAAKIKQNMTLSVSEPPKGTGTEVVAGC
>Mature_108_residues
MKKMITLVAVALTTLALSSGAMAASFSGKVTKNDGERVTLEVAKGGPTWVKKGSVLSAAGGMPTVVDVQGKQVTLKFSKA
KAAKIKQNMTLSVSEPPKGTGTEVVAGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10980; Mature: 10980

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMITLVAVALTTLALSSGAMAASFSGKVTKNDGERVTLEVAKGGPTWVKKGSVLSAAG
CCHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCEEEEEEECCCCCEEECCCEEECCC
GMPTVVDVQGKQVTLKFSKAKAAKIKQNMTLSVSEPPKGTGTEVVAGC
CCCEEEEECCCEEEEEECCCCCCHHCCCCEEEECCCCCCCCCEEEECC
>Mature Secondary Structure
MKKMITLVAVALTTLALSSGAMAASFSGKVTKNDGERVTLEVAKGGPTWVKKGSVLSAAG
CCHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCEEEEEEECCCCCEEECCCEEECCC
GMPTVVDVQGKQVTLKFSKAKAAKIKQNMTLSVSEPPKGTGTEVVAGC
CCCEEEEECCCEEEEEECCCCCCHHCCCCEEEECCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA