Click here to switch to the map view.

The map label for this gene is 189424195

Identifier: 189424195

GI number: 189424195

Start: 1183157

End: 1183486

Strand: Reverse

Name: 189424195

Synonym: Glov_1130

Alternate gene names: NA

Gene position: 1183486-1183157 (Counterclockwise)

Preceding gene: 189424196

Following gene: 189424193

Centisome position: 30.21

GC content: 51.52

Gene sequence:

>330_bases
ATGAAAGAAGAGATTGAATTATACCACAGCAGCGGTAACGTGTTTGCAGACCTTGAACTACCTGATGCCGAAGAAATGCA
GGCAAAGGCCCTGCTCTCTATCCAGATACATGATATCATCAAAAGGCGGCACCTGACCCAGGCACAGGCAGCAGAATTGC
TGGGAATAGATCAGCCCAAGGTATCAGCCTTAATTCGTGGACGCCTGAAAGGCTTTTCCATGGAACGCCTGTTTCACTTC
CTGAACCTGCTGGGCCGGGATGTCCAGATCGTTATCAAGCCCAAGGCACGTTCACGGCAACTGGGCAGCTTGAGAGTCGC
AGCAGCCTGA

Upstream 100 bases:

>100_bases
AAAAACAGGGATTGCCACGCCTCAAGCAGAAATAGAGAAGATCAAGACGCGGTTGAAGATGGCTGAAGAGTTGCACCGGG
GCAAAGGGAGGTAACAAGAT

Downstream 100 bases:

>100_bases
CCCACCCCATTCACCCGGCAACAGCAGAACCGTCGCAAAATGTCGCCTTTTTCTCGGTTAGCAGTACAGCCTGTATCCTT
CGCCTTTTTTCGCCTTCTTT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator XRE Family; Xin-Antitoxin System Antitoxin Component Xre Family; HTH Domain-Containing Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Xre-Family Transcriptional Regulator; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKEEIELYHSSGNVFADLELPDAEEMQAKALLSIQIHDIIKRRHLTQAQAAELLGIDQPKVSALIRGRLKGFSMERLFHF
LNLLGRDVQIVIKPKARSRQLGSLRVAAA

Sequences:

>Translated_109_residues
MKEEIELYHSSGNVFADLELPDAEEMQAKALLSIQIHDIIKRRHLTQAQAAELLGIDQPKVSALIRGRLKGFSMERLFHF
LNLLGRDVQIVIKPKARSRQLGSLRVAAA
>Mature_109_residues
MKEEIELYHSSGNVFADLELPDAEEMQAKALLSIQIHDIIKRRHLTQAQAAELLGIDQPKVSALIRGRLKGFSMERLFHF
LNLLGRDVQIVIKPKARSRQLGSLRVAAA

Specific function: Unknown

COG id: COG5606

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12271; Mature: 12271

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEEIELYHSSGNVFADLELPDAEEMQAKALLSIQIHDIIKRRHLTQAQAAELLGIDQPK
CCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHH
VSALIRGRLKGFSMERLFHFLNLLGRDVQIVIKPKARSRQLGSLRVAAA
HHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECC
>Mature Secondary Structure
MKEEIELYHSSGNVFADLELPDAEEMQAKALLSIQIHDIIKRRHLTQAQAAELLGIDQPK
CCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHH
VSALIRGRLKGFSMERLFHFLNLLGRDVQIVIKPKARSRQLGSLRVAAA
HHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA