| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424168
Identifier: 189424168
GI number: 189424168
Start: 1152500
End: 1153726
Strand: Reverse
Name: 189424168
Synonym: Glov_1103
Alternate gene names: NA
Gene position: 1153726-1152500 (Counterclockwise)
Preceding gene: 189424169
Following gene: 189424166
Centisome position: 29.45
GC content: 58.27
Gene sequence:
>1227_bases ATGAGTCCAGGCAGACGGATCAAAGACAGACTGCTGCGGGTCAAGGCCAGCCTGACCAACCTTGATAATCAGCCCTTAAG CAAGGCCACCCTGGTGATCCTGCTGTTTCTGGATATCTTCATCCTGACTGCCATCTTCAACGGCCTGGCTGCCCATACCC GCCAGTTGAGCACGCCGGAGGAGTTTATCCCCAGCGCCTGCCGCGAGATGGTGATCGACCGCACCTGGAACCCCACCAAC CGGATTGAAAACCTGTCTCAACTGGTGAATACCACCAACAACAGCTACTACCACCGTCCGCAGGAAGGCCCCCACGAGCG CCACCCGGTCTGCACCCCCTACCTGAACCTGCTGGACCGGATCAAGAACGACAAGGCCTTGGCCACCAGCTTTGATGAAC GCCAGAAGGCCGAGCGCGAGACCCAGGAACTACAGCGCAGGATTGATCAACTAAAAGGCAGCTATGACACGGCCCTGCTG GAGGCCATTGCCCAACAGCCTGAACCGGCCACTGAGATTGATGCCACCAAGGCCGAGTTCAAGCAGAGGACCTGCCGCTT GAACAGCCTGAAAACCATGTTGGCAACCCTGGATGAGCAGATCAACAGCAACCCCACCGTGGCAGCGCTCTGGGCCAGAC TGCAGGCATCCCAGGCCAGTGACCGTCAGGCCTTGCTGGCTGAGCTGCGCACCCTGAACTTCTGGTACCCGGTCAAGCGC TTCGGCATGCAGATGCTGTTTCTGCTGCCGCTGTTTGCCATCTTCTATGCCTGGAACAATGCCAGCATCCGGCGCAGCCG CGGACTGCAGACCCTGGTGTCATCCCACCTGCTTGGAGTTGCCTTTATCCCGATCTTCTGCAAGCTGATCGAGGCGATCT ACGACATCATCCCCAAGCAGTTGCTGCACAAGCTGATTGCGCTCTTGACCGCGCTCAAGCTGGTGGCGATCTGGCATTAC CTGATCATTGCGCTGGCCATTGTGGCAGCCCTGTTCCTGATCTACATCTTCCAGAAAAAATTGTTTTCGCGGGAAAAGCT GATTGAACGCAGGATTGCCAAGGGAGAGTGCCAACAGTGCGGCAAACATCTGCCCAATGGGGCGCGGGCCTGCCCGTTCT GCGGTTATCTGCAGTTCAGCCCCTGCCCTGCCTGCGGTAAGCCGAAACACACCCAATCACGCCACTGCTGGGCCTGCGGG AGCGAACATGCCCAGCCATTAAACTGA
Upstream 100 bases:
>100_bases ATAAGCAACTTACACTTTCTTCATCAAAAATACTTAGAATGGCATCGCAACTTTATTTTTATCAAATAACCAAAGCAACC TAACACCCTAGGAGCACACC
Downstream 100 bases:
>100_bases AGTAGCAGTTGGCAGCGTCCCAGCAGAGCGAATTTCCGTAACTCGTTGCTGCTCTTGGCAAAATGGAGCGTAAACAGCCG ATACTGTTTGAAGCCAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MSPGRRIKDRLLRVKASLTNLDNQPLSKATLVILLFLDIFILTAIFNGLAAHTRQLSTPEEFIPSACREMVIDRTWNPTN RIENLSQLVNTTNNSYYHRPQEGPHERHPVCTPYLNLLDRIKNDKALATSFDERQKAERETQELQRRIDQLKGSYDTALL EAIAQQPEPATEIDATKAEFKQRTCRLNSLKTMLATLDEQINSNPTVAALWARLQASQASDRQALLAELRTLNFWYPVKR FGMQMLFLLPLFAIFYAWNNASIRRSRGLQTLVSSHLLGVAFIPIFCKLIEAIYDIIPKQLLHKLIALLTALKLVAIWHY LIIALAIVAALFLIYIFQKKLFSREKLIERRIAKGECQQCGKHLPNGARACPFCGYLQFSPCPACGKPKHTQSRHCWACG SEHAQPLN
Sequences:
>Translated_408_residues MSPGRRIKDRLLRVKASLTNLDNQPLSKATLVILLFLDIFILTAIFNGLAAHTRQLSTPEEFIPSACREMVIDRTWNPTN RIENLSQLVNTTNNSYYHRPQEGPHERHPVCTPYLNLLDRIKNDKALATSFDERQKAERETQELQRRIDQLKGSYDTALL EAIAQQPEPATEIDATKAEFKQRTCRLNSLKTMLATLDEQINSNPTVAALWARLQASQASDRQALLAELRTLNFWYPVKR FGMQMLFLLPLFAIFYAWNNASIRRSRGLQTLVSSHLLGVAFIPIFCKLIEAIYDIIPKQLLHKLIALLTALKLVAIWHY LIIALAIVAALFLIYIFQKKLFSREKLIERRIAKGECQQCGKHLPNGARACPFCGYLQFSPCPACGKPKHTQSRHCWACG SEHAQPLN >Mature_407_residues SPGRRIKDRLLRVKASLTNLDNQPLSKATLVILLFLDIFILTAIFNGLAAHTRQLSTPEEFIPSACREMVIDRTWNPTNR IENLSQLVNTTNNSYYHRPQEGPHERHPVCTPYLNLLDRIKNDKALATSFDERQKAERETQELQRRIDQLKGSYDTALLE AIAQQPEPATEIDATKAEFKQRTCRLNSLKTMLATLDEQINSNPTVAALWARLQASQASDRQALLAELRTLNFWYPVKRF GMQMLFLLPLFAIFYAWNNASIRRSRGLQTLVSSHLLGVAFIPIFCKLIEAIYDIIPKQLLHKLIALLTALKLVAIWHYL IIALAIVAALFLIYIFQKKLFSREKLIERRIAKGECQQCGKHLPNGARACPFCGYLQFSPCPACGKPKHTQSRHCWACGS EHAQPLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46501; Mature: 46370
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPGRRIKDRLLRVKASLTNLDNQPLSKATLVILLFLDIFILTAIFNGLAAHTRQLSTPE CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH EFIPSACREMVIDRTWNPTNRIENLSQLVNTTNNSYYHRPQEGPHERHPVCTPYLNLLDR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHH IKNDKALATSFDERQKAERETQELQRRIDQLKGSYDTALLEAIAQQPEPATEIDATKAEF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH KQRTCRLNSLKTMLATLDEQINSNPTVAALWARLQASQASDRQALLAELRTLNFWYPVKR HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH FGMQMLFLLPLFAIFYAWNNASIRRSRGLQTLVSSHLLGVAFIPIFCKLIEAIYDIIPKQ HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLHKLIALLTALKLVAIWHYLIIALAIVAALFLIYIFQKKLFSREKLIERRIAKGECQQC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKHLPNGARACPFCGYLQFSPCPACGKPKHTQSRHCWACGSEHAQPLN HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure SPGRRIKDRLLRVKASLTNLDNQPLSKATLVILLFLDIFILTAIFNGLAAHTRQLSTPE CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH EFIPSACREMVIDRTWNPTNRIENLSQLVNTTNNSYYHRPQEGPHERHPVCTPYLNLLDR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHH IKNDKALATSFDERQKAERETQELQRRIDQLKGSYDTALLEAIAQQPEPATEIDATKAEF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH KQRTCRLNSLKTMLATLDEQINSNPTVAALWARLQASQASDRQALLAELRTLNFWYPVKR HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH FGMQMLFLLPLFAIFYAWNNASIRRSRGLQTLVSSHLLGVAFIPIFCKLIEAIYDIIPKQ HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLHKLIALLTALKLVAIWHYLIIALAIVAALFLIYIFQKKLFSREKLIERRIAKGECQQC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKHLPNGARACPFCGYLQFSPCPACGKPKHTQSRHCWACGSEHAQPLN HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA