| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is 189424078
Identifier: 189424078
GI number: 189424078
Start: 1051442
End: 1052740
Strand: Reverse
Name: 189424078
Synonym: Glov_1012
Alternate gene names: NA
Gene position: 1052740-1051442 (Counterclockwise)
Preceding gene: 189424079
Following gene: 189424074
Centisome position: 26.87
GC content: 59.58
Gene sequence:
>1299_bases ATGAGACACTCCTTCAGCCACTGTCAGCCGCTCCGTTTTCTCGTTTGCCTGTACCTGCTGCTCTGTCTGCTGGCACCAGC ACCGCTCAGGGCCGAGATCGACGATTCATCGCTCTTTATGGAGGCGTTTACCGCTTTTCAGGGCAAGGATTACCTGCACA GCATTGACAAGCTCCATCAAATGGAGCAGCTGTTCCCCGACTCCCCCCTGCGGGATGTCTCGCTGCTGATGCTGGCCCGG GCGCAGTACCGCTCCGGTGACAACGACAACGCGGCCCAGACGATCCTCAAGTTCAACAAGGAATTTGGCAACGGACCGCT GGCTGACTCGATTGAAGCTGATCTTTCCGCGCTGTCCAAGCGTCGCCAGACCGGTGAAAAACTGCACCCCAACAAGCAGC TGCGAGCCGCAGCCCAGAAGGTCCGTAACGAACAACTGGCCCTGGAACGTGCCGCAGCCCTGAAGGCTGAGCAGGAACGT CTGGCTCAGGAGCGGGCTGAACGGGAACGGGTAGCACGGGAGCGGGCTGAAGCCGAACGTAAGGAACGTGAGCGTCTTGC CGCCATCAAGGCGGCCCGGGAGGCCGTCAAGTTTGAGATTGAATCCCCGTCTGCACCGGCACAGGAGGTTGGCAACGCTG CGCTGGTAGCGTTCCAGCTGATCAATCACGGCAAGGATGCCGAGGAGTTCTCGGTTGAGGCCCTGCTGCCCTCCGGCGTG GAAGGGATGATCACCCAGGCTGCTGACCGCACCCAGCCGGTCCAGAAGATTACCCTGCAGCCCCGTCAACAGGCCGAGTT GCTGATCGCCTTCAAGATGCCCAGCGACCGGGTTGATGGATCGCGGATTACCGCCACGGCCAAGGCCACCTCAACCAGGT TTAATGACATCAGCAAGTCGAAAGAACTGACCATAACCGCCGCAGCGCCGCTGCTGCGTGCCGTATCCCGCCTGCAGCAG ACCGCCGTAGCAGGAGAGGCTGGCAGCTACAAAGTCACCCTGCTGAATGTGGGTTCAAAGGCGGCCAAAGAGATCGATCT GCGGATCAGCCTGCCCCAGCAGTTGAAGCTGACCGATGCCGGCGGCAATGGCTGCTGGATTGAAAACGAACAGCTGGCCG CCTGCCGCATTGATGCCGTAGCATCAGGTAATCTGGTTGAGCGCAGTCTGAAGGTTGTTGTCAGACCTGATGCAGCAGGC AAGACCGCCAAAGGCATGGTAGAGGTACTGCAGACCGCACTGCAGGTAAAAGAGAGTTTCAACGGTGCAGCCTTTACGGT AAAGGCAAAACAGCCCTAG
Upstream 100 bases:
>100_bases GTTACCCGTGAGCGGATTCGTCAGATCGAGGCCAAGGCACTGCGCAAACTGCGCCACCCCAGCCGCAGTAAAAAACTGAA AAGCTTTGTAGAGTAACCAG
Downstream 100 bases:
>100_bases TTCTTCACCGCATTGTTGTAGGTAACCAAAAGCCCCTGACCAGTCATGATCAGGGGCTTTTCTATATTCCGCCAATAGAG TTATCCGATTCCAGTTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Repeat Domain Protein; Pentapeptide Repeat Protein
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MRHSFSHCQPLRFLVCLYLLLCLLAPAPLRAEIDDSSLFMEAFTAFQGKDYLHSIDKLHQMEQLFPDSPLRDVSLLMLAR AQYRSGDNDNAAQTILKFNKEFGNGPLADSIEADLSALSKRRQTGEKLHPNKQLRAAAQKVRNEQLALERAAALKAEQER LAQERAERERVARERAEAERKERERLAAIKAAREAVKFEIESPSAPAQEVGNAALVAFQLINHGKDAEEFSVEALLPSGV EGMITQAADRTQPVQKITLQPRQQAELLIAFKMPSDRVDGSRITATAKATSTRFNDISKSKELTITAAAPLLRAVSRLQQ TAVAGEAGSYKVTLLNVGSKAAKEIDLRISLPQQLKLTDAGGNGCWIENEQLAACRIDAVASGNLVERSLKVVVRPDAAG KTAKGMVEVLQTALQVKESFNGAAFTVKAKQP
Sequences:
>Translated_432_residues MRHSFSHCQPLRFLVCLYLLLCLLAPAPLRAEIDDSSLFMEAFTAFQGKDYLHSIDKLHQMEQLFPDSPLRDVSLLMLAR AQYRSGDNDNAAQTILKFNKEFGNGPLADSIEADLSALSKRRQTGEKLHPNKQLRAAAQKVRNEQLALERAAALKAEQER LAQERAERERVARERAEAERKERERLAAIKAAREAVKFEIESPSAPAQEVGNAALVAFQLINHGKDAEEFSVEALLPSGV EGMITQAADRTQPVQKITLQPRQQAELLIAFKMPSDRVDGSRITATAKATSTRFNDISKSKELTITAAAPLLRAVSRLQQ TAVAGEAGSYKVTLLNVGSKAAKEIDLRISLPQQLKLTDAGGNGCWIENEQLAACRIDAVASGNLVERSLKVVVRPDAAG KTAKGMVEVLQTALQVKESFNGAAFTVKAKQP >Mature_432_residues MRHSFSHCQPLRFLVCLYLLLCLLAPAPLRAEIDDSSLFMEAFTAFQGKDYLHSIDKLHQMEQLFPDSPLRDVSLLMLAR AQYRSGDNDNAAQTILKFNKEFGNGPLADSIEADLSALSKRRQTGEKLHPNKQLRAAAQKVRNEQLALERAAALKAEQER LAQERAERERVARERAEAERKERERLAAIKAAREAVKFEIESPSAPAQEVGNAALVAFQLINHGKDAEEFSVEALLPSGV EGMITQAADRTQPVQKITLQPRQQAELLIAFKMPSDRVDGSRITATAKATSTRFNDISKSKELTITAAAPLLRAVSRLQQ TAVAGEAGSYKVTLLNVGSKAAKEIDLRISLPQQLKLTDAGGNGCWIENEQLAACRIDAVASGNLVERSLKVVVRPDAAG KTAKGMVEVLQTALQVKESFNGAAFTVKAKQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47344; Mature: 47344
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHSFSHCQPLRFLVCLYLLLCLLAPAPLRAEIDDSSLFMEAFTAFQGKDYLHSIDKLHQ CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCHHHHHHHHHHHH MEQLFPDSPLRDVSLLMLARAQYRSGDNDNAAQTILKFNKEFGNGPLADSIEADLSALSK HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RRQTGEKLHPNKQLRAAAQKVRNEQLALERAAALKAEQERLAQERAERERVARERAEAER HHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KERERLAAIKAAREAVKFEIESPSAPAQEVGNAALVAFQLINHGKDAEEFSVEALLPSGV HHHHHHHHHHHHHHHHEEEECCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC EGMITQAADRTQPVQKITLQPRQQAELLIAFKMPSDRVDGSRITATAKATSTRFNDISKS HHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHCCC KELTITAAAPLLRAVSRLQQTAVAGEAGSYKVTLLNVGSKAAKEIDLRISLPQQLKLTDA CCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHEEEEEEECCCCEEEEEC GGNGCWIENEQLAACRIDAVASGNLVERSLKVVVRPDAAGKTAKGMVEVLQTALQVKESF CCCCEEEECCCEEEEEEHHHCCCHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC NGAAFTVKAKQP CCCEEEEEECCC >Mature Secondary Structure MRHSFSHCQPLRFLVCLYLLLCLLAPAPLRAEIDDSSLFMEAFTAFQGKDYLHSIDKLHQ CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCHHHHHHHHHHHH MEQLFPDSPLRDVSLLMLARAQYRSGDNDNAAQTILKFNKEFGNGPLADSIEADLSALSK HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RRQTGEKLHPNKQLRAAAQKVRNEQLALERAAALKAEQERLAQERAERERVARERAEAER HHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KERERLAAIKAAREAVKFEIESPSAPAQEVGNAALVAFQLINHGKDAEEFSVEALLPSGV HHHHHHHHHHHHHHHHEEEECCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC EGMITQAADRTQPVQKITLQPRQQAELLIAFKMPSDRVDGSRITATAKATSTRFNDISKS HHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHCCC KELTITAAAPLLRAVSRLQQTAVAGEAGSYKVTLLNVGSKAAKEIDLRISLPQQLKLTDA CCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHEEEEEEECCCCEEEEEC GGNGCWIENEQLAACRIDAVASGNLVERSLKVVVRPDAAGKTAKGMVEVLQTALQVKESF CCCCEEEECCCEEEEEEHHHCCCHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC NGAAFTVKAKQP CCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA