Definition Geobacter lovleyi SZ chromosome, complete genome.
Accession NC_010814
Length 3,917,761

Click here to switch to the map view.

The map label for this gene is 189424078

Identifier: 189424078

GI number: 189424078

Start: 1051442

End: 1052740

Strand: Reverse

Name: 189424078

Synonym: Glov_1012

Alternate gene names: NA

Gene position: 1052740-1051442 (Counterclockwise)

Preceding gene: 189424079

Following gene: 189424074

Centisome position: 26.87

GC content: 59.58

Gene sequence:

>1299_bases
ATGAGACACTCCTTCAGCCACTGTCAGCCGCTCCGTTTTCTCGTTTGCCTGTACCTGCTGCTCTGTCTGCTGGCACCAGC
ACCGCTCAGGGCCGAGATCGACGATTCATCGCTCTTTATGGAGGCGTTTACCGCTTTTCAGGGCAAGGATTACCTGCACA
GCATTGACAAGCTCCATCAAATGGAGCAGCTGTTCCCCGACTCCCCCCTGCGGGATGTCTCGCTGCTGATGCTGGCCCGG
GCGCAGTACCGCTCCGGTGACAACGACAACGCGGCCCAGACGATCCTCAAGTTCAACAAGGAATTTGGCAACGGACCGCT
GGCTGACTCGATTGAAGCTGATCTTTCCGCGCTGTCCAAGCGTCGCCAGACCGGTGAAAAACTGCACCCCAACAAGCAGC
TGCGAGCCGCAGCCCAGAAGGTCCGTAACGAACAACTGGCCCTGGAACGTGCCGCAGCCCTGAAGGCTGAGCAGGAACGT
CTGGCTCAGGAGCGGGCTGAACGGGAACGGGTAGCACGGGAGCGGGCTGAAGCCGAACGTAAGGAACGTGAGCGTCTTGC
CGCCATCAAGGCGGCCCGGGAGGCCGTCAAGTTTGAGATTGAATCCCCGTCTGCACCGGCACAGGAGGTTGGCAACGCTG
CGCTGGTAGCGTTCCAGCTGATCAATCACGGCAAGGATGCCGAGGAGTTCTCGGTTGAGGCCCTGCTGCCCTCCGGCGTG
GAAGGGATGATCACCCAGGCTGCTGACCGCACCCAGCCGGTCCAGAAGATTACCCTGCAGCCCCGTCAACAGGCCGAGTT
GCTGATCGCCTTCAAGATGCCCAGCGACCGGGTTGATGGATCGCGGATTACCGCCACGGCCAAGGCCACCTCAACCAGGT
TTAATGACATCAGCAAGTCGAAAGAACTGACCATAACCGCCGCAGCGCCGCTGCTGCGTGCCGTATCCCGCCTGCAGCAG
ACCGCCGTAGCAGGAGAGGCTGGCAGCTACAAAGTCACCCTGCTGAATGTGGGTTCAAAGGCGGCCAAAGAGATCGATCT
GCGGATCAGCCTGCCCCAGCAGTTGAAGCTGACCGATGCCGGCGGCAATGGCTGCTGGATTGAAAACGAACAGCTGGCCG
CCTGCCGCATTGATGCCGTAGCATCAGGTAATCTGGTTGAGCGCAGTCTGAAGGTTGTTGTCAGACCTGATGCAGCAGGC
AAGACCGCCAAAGGCATGGTAGAGGTACTGCAGACCGCACTGCAGGTAAAAGAGAGTTTCAACGGTGCAGCCTTTACGGT
AAAGGCAAAACAGCCCTAG

Upstream 100 bases:

>100_bases
GTTACCCGTGAGCGGATTCGTCAGATCGAGGCCAAGGCACTGCGCAAACTGCGCCACCCCAGCCGCAGTAAAAAACTGAA
AAGCTTTGTAGAGTAACCAG

Downstream 100 bases:

>100_bases
TTCTTCACCGCATTGTTGTAGGTAACCAAAAGCCCCTGACCAGTCATGATCAGGGGCTTTTCTATATTCCGCCAATAGAG
TTATCCGATTCCAGTTCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Repeat Domain Protein; Pentapeptide Repeat Protein

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MRHSFSHCQPLRFLVCLYLLLCLLAPAPLRAEIDDSSLFMEAFTAFQGKDYLHSIDKLHQMEQLFPDSPLRDVSLLMLAR
AQYRSGDNDNAAQTILKFNKEFGNGPLADSIEADLSALSKRRQTGEKLHPNKQLRAAAQKVRNEQLALERAAALKAEQER
LAQERAERERVARERAEAERKERERLAAIKAAREAVKFEIESPSAPAQEVGNAALVAFQLINHGKDAEEFSVEALLPSGV
EGMITQAADRTQPVQKITLQPRQQAELLIAFKMPSDRVDGSRITATAKATSTRFNDISKSKELTITAAAPLLRAVSRLQQ
TAVAGEAGSYKVTLLNVGSKAAKEIDLRISLPQQLKLTDAGGNGCWIENEQLAACRIDAVASGNLVERSLKVVVRPDAAG
KTAKGMVEVLQTALQVKESFNGAAFTVKAKQP

Sequences:

>Translated_432_residues
MRHSFSHCQPLRFLVCLYLLLCLLAPAPLRAEIDDSSLFMEAFTAFQGKDYLHSIDKLHQMEQLFPDSPLRDVSLLMLAR
AQYRSGDNDNAAQTILKFNKEFGNGPLADSIEADLSALSKRRQTGEKLHPNKQLRAAAQKVRNEQLALERAAALKAEQER
LAQERAERERVARERAEAERKERERLAAIKAAREAVKFEIESPSAPAQEVGNAALVAFQLINHGKDAEEFSVEALLPSGV
EGMITQAADRTQPVQKITLQPRQQAELLIAFKMPSDRVDGSRITATAKATSTRFNDISKSKELTITAAAPLLRAVSRLQQ
TAVAGEAGSYKVTLLNVGSKAAKEIDLRISLPQQLKLTDAGGNGCWIENEQLAACRIDAVASGNLVERSLKVVVRPDAAG
KTAKGMVEVLQTALQVKESFNGAAFTVKAKQP
>Mature_432_residues
MRHSFSHCQPLRFLVCLYLLLCLLAPAPLRAEIDDSSLFMEAFTAFQGKDYLHSIDKLHQMEQLFPDSPLRDVSLLMLAR
AQYRSGDNDNAAQTILKFNKEFGNGPLADSIEADLSALSKRRQTGEKLHPNKQLRAAAQKVRNEQLALERAAALKAEQER
LAQERAERERVARERAEAERKERERLAAIKAAREAVKFEIESPSAPAQEVGNAALVAFQLINHGKDAEEFSVEALLPSGV
EGMITQAADRTQPVQKITLQPRQQAELLIAFKMPSDRVDGSRITATAKATSTRFNDISKSKELTITAAAPLLRAVSRLQQ
TAVAGEAGSYKVTLLNVGSKAAKEIDLRISLPQQLKLTDAGGNGCWIENEQLAACRIDAVASGNLVERSLKVVVRPDAAG
KTAKGMVEVLQTALQVKESFNGAAFTVKAKQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47344; Mature: 47344

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHSFSHCQPLRFLVCLYLLLCLLAPAPLRAEIDDSSLFMEAFTAFQGKDYLHSIDKLHQ
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCHHHHHHHHHHHH
MEQLFPDSPLRDVSLLMLARAQYRSGDNDNAAQTILKFNKEFGNGPLADSIEADLSALSK
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RRQTGEKLHPNKQLRAAAQKVRNEQLALERAAALKAEQERLAQERAERERVARERAEAER
HHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KERERLAAIKAAREAVKFEIESPSAPAQEVGNAALVAFQLINHGKDAEEFSVEALLPSGV
HHHHHHHHHHHHHHHHEEEECCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
EGMITQAADRTQPVQKITLQPRQQAELLIAFKMPSDRVDGSRITATAKATSTRFNDISKS
HHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHCCC
KELTITAAAPLLRAVSRLQQTAVAGEAGSYKVTLLNVGSKAAKEIDLRISLPQQLKLTDA
CCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHEEEEEEECCCCEEEEEC
GGNGCWIENEQLAACRIDAVASGNLVERSLKVVVRPDAAGKTAKGMVEVLQTALQVKESF
CCCCEEEECCCEEEEEEHHHCCCHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
NGAAFTVKAKQP
CCCEEEEEECCC
>Mature Secondary Structure
MRHSFSHCQPLRFLVCLYLLLCLLAPAPLRAEIDDSSLFMEAFTAFQGKDYLHSIDKLHQ
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCHHHHHHHHHHHH
MEQLFPDSPLRDVSLLMLARAQYRSGDNDNAAQTILKFNKEFGNGPLADSIEADLSALSK
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RRQTGEKLHPNKQLRAAAQKVRNEQLALERAAALKAEQERLAQERAERERVARERAEAER
HHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KERERLAAIKAAREAVKFEIESPSAPAQEVGNAALVAFQLINHGKDAEEFSVEALLPSGV
HHHHHHHHHHHHHHHHEEEECCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
EGMITQAADRTQPVQKITLQPRQQAELLIAFKMPSDRVDGSRITATAKATSTRFNDISKS
HHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHCCC
KELTITAAAPLLRAVSRLQQTAVAGEAGSYKVTLLNVGSKAAKEIDLRISLPQQLKLTDA
CCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHEEEEEEECCCCEEEEEC
GGNGCWIENEQLAACRIDAVASGNLVERSLKVVVRPDAAGKTAKGMVEVLQTALQVKESF
CCCCEEEECCCEEEEEEHHHCCCHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
NGAAFTVKAKQP
CCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA