| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is 189424040
Identifier: 189424040
GI number: 189424040
Start: 1013480
End: 1014028
Strand: Reverse
Name: 189424040
Synonym: Glov_0974
Alternate gene names: NA
Gene position: 1014028-1013480 (Counterclockwise)
Preceding gene: 189424041
Following gene: 189424039
Centisome position: 25.88
GC content: 54.46
Gene sequence:
>549_bases ATGAGCACCACAATGAAAAAGCAGAAGGCTTCAGGATTACGGAATCAAAAGGGCTTTACCCTGGTAGAGATGTTGATCGT GCTGGTCCTGATCGGCCTGGCCGTTGCCTTAATGGTGGGGATCTTCGGCAACCCCTTTGCCAACGCCAGCGTTGACAGCG CCGCCACCCGGGTGATTGATGACCTGCGTTCCATTGAAGGGGCAGCACAATCATACAAGGCCAAAGAGGCAGCCACCCCA ACCGGTATTTCAGGCACAGCAACCTGCCTGGTGGAAAAAGGCTATCTGAAAGTCTCCCCTACCGCTCCCTCGCCGATATC CAACGCCTACAACTGGACCACAACCGGCGTGACTGCATTCGGTTCAACGGGCACTGACACGGTAGTCACCCTTGCCGGCA TCAACACAGACATCTGCAAGGCGATCAACAAGGCGGCCTATGGTGACACAACAGGCACCATCCCCGCATCCGTTTCAGGT ACTAAAAATATCCAGTGCTACGGTTCAGCGGATCCGTACACCGCGGTAATTCCGGTCTTTGTTCAATAA
Upstream 100 bases:
>100_bases ATCATGGCCTGGGTCACCAGTATTGCAGTGTAGCTGTCAATCCTCATTTCGTACTGTTCAAGTTGGACAGAAAACTCACA ACCTAAGGAGAGTCACCGGC
Downstream 100 bases:
>100_bases GCCAGGGCAACTGAAGGCTGTCTGCCGGTTGTGGATCCCCCCCTCAATCGGCAGACAGCCCTATGGAGAAGACAATGCGT AACAGAAGCGGTTTTACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSTTMKKQKASGLRNQKGFTLVEMLIVLVLIGLAVALMVGIFGNPFANASVDSAATRVIDDLRSIEGAAQSYKAKEAATP TGISGTATCLVEKGYLKVSPTAPSPISNAYNWTTTGVTAFGSTGTDTVVTLAGINTDICKAINKAAYGDTTGTIPASVSG TKNIQCYGSADPYTAVIPVFVQ
Sequences:
>Translated_182_residues MSTTMKKQKASGLRNQKGFTLVEMLIVLVLIGLAVALMVGIFGNPFANASVDSAATRVIDDLRSIEGAAQSYKAKEAATP TGISGTATCLVEKGYLKVSPTAPSPISNAYNWTTTGVTAFGSTGTDTVVTLAGINTDICKAINKAAYGDTTGTIPASVSG TKNIQCYGSADPYTAVIPVFVQ >Mature_181_residues STTMKKQKASGLRNQKGFTLVEMLIVLVLIGLAVALMVGIFGNPFANASVDSAATRVIDDLRSIEGAAQSYKAKEAATPT GISGTATCLVEKGYLKVSPTAPSPISNAYNWTTTGVTAFGSTGTDTVVTLAGINTDICKAINKAAYGDTTGTIPASVSGT KNIQCYGSADPYTAVIPVFVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18736; Mature: 18604
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTMKKQKASGLRNQKGFTLVEMLIVLVLIGLAVALMVGIFGNPFANASVDSAATRVID CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH DLRSIEGAAQSYKAKEAATPTGISGTATCLVEKGYLKVSPTAPSPISNAYNWTTTGVTAF HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCEEEE GSTGTDTVVTLAGINTDICKAINKAAYGDTTGTIPASVSGTKNIQCYGSADPYTAVIPVF CCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEE VQ EC >Mature Secondary Structure STTMKKQKASGLRNQKGFTLVEMLIVLVLIGLAVALMVGIFGNPFANASVDSAATRVID CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH DLRSIEGAAQSYKAKEAATPTGISGTATCLVEKGYLKVSPTAPSPISNAYNWTTTGVTAF HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCEEEE GSTGTDTVVTLAGINTDICKAINKAAYGDTTGTIPASVSGTKNIQCYGSADPYTAVIPVF CCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEE VQ EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA