| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is resE [H]
Identifier: 189423938
GI number: 189423938
Start: 896183
End: 897259
Strand: Reverse
Name: resE [H]
Synonym: Glov_0871
Alternate gene names: 189423938
Gene position: 897259-896183 (Counterclockwise)
Preceding gene: 189423939
Following gene: 189423937
Centisome position: 22.9
GC content: 57.47
Gene sequence:
>1077_bases ATGGGCATCAAACAACTTCTGATTGTCGCAAACGACACCAGCGCCGCCCAACTGGCATTCCAGCTGCTCGAAGCAGGGCC GTACCAGCTGCACCTGGCCGAAACCTGCGAAGCGGCCCGCAGCATACTTACGCGGCAACGGCTGGATGCCATCCTGCTCG GTTCTCCCCCCTACCAGCACTGCCTTCCCTCCCTGGAGCATCTGCAGGAATCCGGCAACGATCCGGCGGTAATTGCCCTG CTGGATGCCAATGAGCAGGAGCGCTATCTGGACTGTCACAAACAGGGTGCGCTGGATTGCCTGATGGCCCCGTTCAGTGT TGAGCGGCTGGTAAAGAGTATAGAACGCTGCCTGGCAATCAAGTCACTGGAGCGGGAAAAGCGGGACTTTATCTCCATGC TCTCCCATGATCTGAAAAACCCGCTTACTGCGGCGATCGGCTCAATTGACCTGGTCAGAGAAAAGCGGCTCGGCCCGCTT AACCGTGAACAGACCAGTTACCTGCTTTCAGCCATTGAGAGCTGTAATGAAGTGGTGGCCATGATCGACAACCTGCTGGA CCTCCACCGTCTTGAGGCCGGCAAGATCGCCTTTCACAAAACACCGGTCAACCTGTCAGAGCTGGCACAACAGGTAGTCG CAGGATTTCGCGGCATGATCAAACATGCCCAGATCCACCTGCAGACGCAGCTGGAAGATGATCTGCCCCTGCTGAATCTG GACAGGAACAAATTCTCCCGGGTGATCGCCAACCTGCTAGCCAATGCCGTCAAATTCACCCCCTGCGGCGGAGAAATCAG CGTGCGCTGTTACTGCGGCGTGTCGGCCGACTCTGATGTGGCGGTCATGCTCAGCATCACAGATACCGGTAACGGCATTG CCACGGTCGAACTGCCGATGATCTTTGACCGTTTTGTCCAGGCCCGCAACCAGACCGGACGGGGCAGTGGAGGCAGCGGG CTCGGCCTGGCATTCTGCAAAATGGTAACTGAAGCGCATAACGGCACCATCACTACTGACAGCCGGGAAGGTGTCGGCAG CGAATTCACCATTACCCTGCCACTGCCGGAACAATAA
Upstream 100 bases:
>100_bases ATCGTGAACGGCAGCTATCGAAACATAAAGATCACCACTCCGGAAGACCTGGTGCTTGCCGAGGCGTTTCTAAACCAGAC AGCTGGAGGCCGGCCATAAC
Downstream 100 bases:
>100_bases CGGAGACTGGCTATGACTCAACGTTTTCTGCTCACCCTCGCTTTGCTGGCAACCATGGTATTTTGTTCAGGTACCGCCTC CGCTGCCACGATTGATTTAA
Product: response regulator receiver sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MGIKQLLIVANDTSAAQLAFQLLEAGPYQLHLAETCEAARSILTRQRLDAILLGSPPYQHCLPSLEHLQESGNDPAVIAL LDANEQERYLDCHKQGALDCLMAPFSVERLVKSIERCLAIKSLEREKRDFISMLSHDLKNPLTAAIGSIDLVREKRLGPL NREQTSYLLSAIESCNEVVAMIDNLLDLHRLEAGKIAFHKTPVNLSELAQQVVAGFRGMIKHAQIHLQTQLEDDLPLLNL DRNKFSRVIANLLANAVKFTPCGGEISVRCYCGVSADSDVAVMLSITDTGNGIATVELPMIFDRFVQARNQTGRGSGGSG LGLAFCKMVTEAHNGTITTDSREGVGSEFTITLPLPEQ
Sequences:
>Translated_358_residues MGIKQLLIVANDTSAAQLAFQLLEAGPYQLHLAETCEAARSILTRQRLDAILLGSPPYQHCLPSLEHLQESGNDPAVIAL LDANEQERYLDCHKQGALDCLMAPFSVERLVKSIERCLAIKSLEREKRDFISMLSHDLKNPLTAAIGSIDLVREKRLGPL NREQTSYLLSAIESCNEVVAMIDNLLDLHRLEAGKIAFHKTPVNLSELAQQVVAGFRGMIKHAQIHLQTQLEDDLPLLNL DRNKFSRVIANLLANAVKFTPCGGEISVRCYCGVSADSDVAVMLSITDTGNGIATVELPMIFDRFVQARNQTGRGSGGSG LGLAFCKMVTEAHNGTITTDSREGVGSEFTITLPLPEQ >Mature_357_residues GIKQLLIVANDTSAAQLAFQLLEAGPYQLHLAETCEAARSILTRQRLDAILLGSPPYQHCLPSLEHLQESGNDPAVIALL DANEQERYLDCHKQGALDCLMAPFSVERLVKSIERCLAIKSLEREKRDFISMLSHDLKNPLTAAIGSIDLVREKRLGPLN REQTSYLLSAIESCNEVVAMIDNLLDLHRLEAGKIAFHKTPVNLSELAQQVVAGFRGMIKHAQIHLQTQLEDDLPLLNLD RNKFSRVIANLLANAVKFTPCGGEISVRCYCGVSADSDVAVMLSITDTGNGIATVELPMIFDRFVQARNQTGRGSGGSGL GLAFCKMVTEAHNGTITTDSREGVGSEFTITLPLPEQ
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=243, Percent_Identity=31.2757201646091, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1788393, Length=230, Percent_Identity=29.1304347826087, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1788713, Length=243, Percent_Identity=27.9835390946502, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1789149, Length=250, Percent_Identity=30, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI48994928, Length=251, Percent_Identity=29.8804780876494, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786912, Length=288, Percent_Identity=29.1666666666667, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788549, Length=230, Percent_Identity=29.5652173913043, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1786783, Length=265, Percent_Identity=28.3018867924528, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1786600, Length=257, Percent_Identity=25.6809338521401, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI87081816, Length=233, Percent_Identity=29.1845493562232, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790436, Length=274, Percent_Identity=26.2773722627737, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI87082128, Length=239, Percent_Identity=28.0334728033473, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1790861, Length=214, Percent_Identity=30.8411214953271, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1787894, Length=242, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790300, Length=234, Percent_Identity=25.6410256410256, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1789808, Length=258, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 39113; Mature: 38982
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKQLLIVANDTSAAQLAFQLLEAGPYQLHLAETCEAARSILTRQRLDAILLGSPPYQH CCCCEEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCEEEECCCCHHH CLPSLEHLQESGNDPAVIALLDANEQERYLDCHKQGALDCLMAPFSVERLVKSIERCLAI HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHH KSLEREKRDFISMLSHDLKNPLTAAIGSIDLVREKRLGPLNREQTSYLLSAIESCNEVVA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH MIDNLLDLHRLEAGKIAFHKTPVNLSELAQQVVAGFRGMIKHAQIHLQTQLEDDLPLLNL HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEC DRNKFSRVIANLLANAVKFTPCGGEISVRCYCGVSADSDVAVMLSITDTGNGIATVELPM CHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCEEEEEHHH IFDRFVQARNQTGRGSGGSGLGLAFCKMVTEAHNGTITTDSREGVGSEFTITLPLPEQ HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCCC >Mature Secondary Structure GIKQLLIVANDTSAAQLAFQLLEAGPYQLHLAETCEAARSILTRQRLDAILLGSPPYQH CCCEEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCEEEECCCCHHH CLPSLEHLQESGNDPAVIALLDANEQERYLDCHKQGALDCLMAPFSVERLVKSIERCLAI HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHH KSLEREKRDFISMLSHDLKNPLTAAIGSIDLVREKRLGPLNREQTSYLLSAIESCNEVVA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH MIDNLLDLHRLEAGKIAFHKTPVNLSELAQQVVAGFRGMIKHAQIHLQTQLEDDLPLLNL HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEC DRNKFSRVIANLLANAVKFTPCGGEISVRCYCGVSADSDVAVMLSITDTGNGIATVELPM CHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCEEEEEHHH IFDRFVQARNQTGRGSGGSGLGLAFCKMVTEAHNGTITTDSREGVGSEFTITLPLPEQ HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]