| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423804
Identifier: 189423804
GI number: 189423804
Start: 747173
End: 748249
Strand: Reverse
Name: 189423804
Synonym: Glov_0735
Alternate gene names: NA
Gene position: 748249-747173 (Counterclockwise)
Preceding gene: 189423805
Following gene: 189423803
Centisome position: 19.1
GC content: 59.15
Gene sequence:
>1077_bases ATGATCTCAGGAATACGACAGTTCATACAGCAGTGTTTGACGCAGGGGATGATCCTGCCCGGCCTCACGGTCATTATCGG TTGTGATCCTGATTACGCAGAGAAAGTCAGACCGATGAAAGGTATCATCACCCACTTTTTTTTGATCGGCCTCCTGATGA TCTCCGGCTGCGCCGGACAACCGTCTGACAGCCAGTCGTCACTGAACGGCACGGTTATCACCGGCAATCAGTTGCTGGTT GCACTGGCAGAGTCGCGCGACAGTTCAATGGTGAAAATCTATGCCTTTGAACGCACGGTTCTTGGCTGGGAGCTGCGCAC CGGTCCCCTGGCGGGAGTTACCGGCCGCAACGGCTTCGCACCTGCCGGTGACAAGCGCGAAGGTGATGGCCGGGCACCAA CCGGCCTGTTTGCGCTGGAATCGGCCTTTGGGTATGCCGCTTCCATCACCAGCAGCATGCCGTACCAACAGGCAACCGAG AATGACCTGTGGGTGGATGATGTCCTTTCCCCCGACTACAACACCTGGGTAAAACGCGGCCAGACCAGTGCAACCTCTTT TGAGGTGATGAAGCTGGCGGACAACCGCTACCGCCACGGCCTGATAACCGGCTACAACCGTAAGCCGGTTGTCAAAGGAT ACGGCAGCGGAATCTTTGTCCATGCCTGGCTGGAGGCAGGCTACACCACCAGCGGTTGCGTGGCGTTTGATGAAACCGAG CTGATCAAACTCCTGGCCTGGCTTGATCCGCTACAACAGCCGCAGATACTGATGGGCACGCGGCAAGACCTGGCAACGGT TGCCGGCCTGCCTGCGCTGCCGCCGGATGCGGACCTGCCGGGCATCCTGGAGAAACAGATTCGCGCCATGGTGGCCGGAT ATCAGGAGCGCTTGGTGGAATACCGCGCCCCTGACGGCTTCTTCGGTATGGCGGTGGCCTTACCCGGCAACGCCCTCAGC TATGTTGTGCTGACCCAATGGGGCTCCGGCCACCAGCCTGAAGTCGGAGAACTGGTGGTCCCCAAAGAGCAGGCGCTGCA GACGGTCAAAGAGGCTGCCCGCCGGTATGAACGATAA
Upstream 100 bases:
>100_bases GAGCAAGAGTGCTGCGTGTGAAATAATATTCAAAGCGGCTAAACGATGAAATGAATAGCAGGAACGGAAGTGACCGGGAG TTTTATCGAGAGAAAGAGCC
Downstream 100 bases:
>100_bases TACCGCAATCAGTGCTGGTTCGGACGGATAAAAAATCAAAAAAATATTTTAAATCGTTTTAGACAGACAAAACAGGTATG GCCTGCAGGGGAATACCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG Family Protein; Lipoprotein; S-Layer Homology And Secreted GW Repeat Fusion Protein; LOW QUALITY PROTEIN LamB/YcsF Family Protein; S-Layer Domain Protein; S-Layer Domain-Containing Protein; SH3 Domain-Containing Protein
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MISGIRQFIQQCLTQGMILPGLTVIIGCDPDYAEKVRPMKGIITHFFLIGLLMISGCAGQPSDSQSSLNGTVITGNQLLV ALAESRDSSMVKIYAFERTVLGWELRTGPLAGVTGRNGFAPAGDKREGDGRAPTGLFALESAFGYAASITSSMPYQQATE NDLWVDDVLSPDYNTWVKRGQTSATSFEVMKLADNRYRHGLITGYNRKPVVKGYGSGIFVHAWLEAGYTTSGCVAFDETE LIKLLAWLDPLQQPQILMGTRQDLATVAGLPALPPDADLPGILEKQIRAMVAGYQERLVEYRAPDGFFGMAVALPGNALS YVVLTQWGSGHQPEVGELVVPKEQALQTVKEAARRYER
Sequences:
>Translated_358_residues MISGIRQFIQQCLTQGMILPGLTVIIGCDPDYAEKVRPMKGIITHFFLIGLLMISGCAGQPSDSQSSLNGTVITGNQLLV ALAESRDSSMVKIYAFERTVLGWELRTGPLAGVTGRNGFAPAGDKREGDGRAPTGLFALESAFGYAASITSSMPYQQATE NDLWVDDVLSPDYNTWVKRGQTSATSFEVMKLADNRYRHGLITGYNRKPVVKGYGSGIFVHAWLEAGYTTSGCVAFDETE LIKLLAWLDPLQQPQILMGTRQDLATVAGLPALPPDADLPGILEKQIRAMVAGYQERLVEYRAPDGFFGMAVALPGNALS YVVLTQWGSGHQPEVGELVVPKEQALQTVKEAARRYER >Mature_358_residues MISGIRQFIQQCLTQGMILPGLTVIIGCDPDYAEKVRPMKGIITHFFLIGLLMISGCAGQPSDSQSSLNGTVITGNQLLV ALAESRDSSMVKIYAFERTVLGWELRTGPLAGVTGRNGFAPAGDKREGDGRAPTGLFALESAFGYAASITSSMPYQQATE NDLWVDDVLSPDYNTWVKRGQTSATSFEVMKLADNRYRHGLITGYNRKPVVKGYGSGIFVHAWLEAGYTTSGCVAFDETE LIKLLAWLDPLQQPQILMGTRQDLATVAGLPALPPDADLPGILEKQIRAMVAGYQERLVEYRAPDGFFGMAVALPGNALS YVVLTQWGSGHQPEVGELVVPKEQALQTVKEAARRYER
Specific function: Unknown
COG id: COG3786
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38924; Mature: 38924
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISGIRQFIQQCLTQGMILPGLTVIIGCDPDYAEKVRPMKGIITHFFLIGLLMISGCAGQ CCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PSDSQSSLNGTVITGNQLLVALAESRDSSMVKIYAFERTVLGWELRTGPLAGVTGRNGFA CCCCCCCCCCEEEECCEEEEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCC PAGDKREGDGRAPTGLFALESAFGYAASITSSMPYQQATENDLWVDDVLSPDYNTWVKRG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHCC QTSATSFEVMKLADNRYRHGLITGYNRKPVVKGYGSGIFVHAWLEAGYTTSGCVAFDETE CCCCHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCEEEEEEECCCCCCCCEEEECHHH LIKLLAWLDPLQQPQILMGTRQDLATVAGLPALPPDADLPGILEKQIRAMVAGYQERLVE HHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YRAPDGFFGMAVALPGNALSYVVLTQWGSGHQPEVGELVVPKEQALQTVKEAARRYER HCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCEECCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MISGIRQFIQQCLTQGMILPGLTVIIGCDPDYAEKVRPMKGIITHFFLIGLLMISGCAGQ CCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PSDSQSSLNGTVITGNQLLVALAESRDSSMVKIYAFERTVLGWELRTGPLAGVTGRNGFA CCCCCCCCCCEEEECCEEEEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCC PAGDKREGDGRAPTGLFALESAFGYAASITSSMPYQQATENDLWVDDVLSPDYNTWVKRG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHCC QTSATSFEVMKLADNRYRHGLITGYNRKPVVKGYGSGIFVHAWLEAGYTTSGCVAFDETE CCCCHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCEEEEEEECCCCCCCCEEEECHHH LIKLLAWLDPLQQPQILMGTRQDLATVAGLPALPPDADLPGILEKQIRAMVAGYQERLVE HHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YRAPDGFFGMAVALPGNALSYVVLTQWGSGHQPEVGELVVPKEQALQTVKEAARRYER HCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCEECCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA