| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423797
Identifier: 189423797
GI number: 189423797
Start: 742333
End: 742809
Strand: Reverse
Name: 189423797
Synonym: Glov_0728
Alternate gene names: NA
Gene position: 742809-742333 (Counterclockwise)
Preceding gene: 189423798
Following gene: 189423796
Centisome position: 18.96
GC content: 46.54
Gene sequence:
>477_bases ATGAATACACGGCAGTACATTAGAAGTTTCCTTGTAGCAGCACTCCTCATGGCGACAATCACCGGTCAGTCAAAGGCACA GAATTTCAGCGAAACCTGCAGAAACATATCACTACAAGGAAAGTACCTTAGCGCTGTGTGCATGACCTCAATGAAATGTA CCCCGGGCATAGAATCCCCCTGTATCTGTGATTTTCTCGGAATGAATTGCCGTATCGGACGACCAACCGCAATCGATCTT AATCAGGGCATCTCAAATCTAGCGGGAGCGCTAAAATTTAAAGGGACAAATTTTAGTACCACCTGCAGCAACCTCCATCT TGAGGTAAAATCAGGTTATGAGGTTGCGATGACTGGTAGCGTGACCTTACATGCAAAGTGCAAAACCGGGGGGCTTTTGT CTTTGGACATCCCTGCAGCACTCGATCTAAATACCGGTCTTAGCAACAATAAGGGAGTGCTGCTGTTTGACCAGTAG
Upstream 100 bases:
>100_bases CTGTCCTAGAGAGCGTCAAATACGGTTTCTGCCCTAATTAGCCGGAATAAGTTCAACGCTTAATTCAGCTTAACACCACA ATTCCAGGGGGAAGATCCCG
Downstream 100 bases:
>100_bases GGATAACTGGCGAGGAAATTAGAACACTTATTTTTTTTGTGCATGAGGGGCAGGTCTCAACTCCATACAAACTTTTAAAA TGTCGGCAGTTGCGACCTGC
Product: Cyanovirin-N domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MNTRQYIRSFLVAALLMATITGQSKAQNFSETCRNISLQGKYLSAVCMTSMKCTPGIESPCICDFLGMNCRIGRPTAIDL NQGISNLAGALKFKGTNFSTTCSNLHLEVKSGYEVAMTGSVTLHAKCKTGGLLSLDIPAALDLNTGLSNNKGVLLFDQ
Sequences:
>Translated_158_residues MNTRQYIRSFLVAALLMATITGQSKAQNFSETCRNISLQGKYLSAVCMTSMKCTPGIESPCICDFLGMNCRIGRPTAIDL NQGISNLAGALKFKGTNFSTTCSNLHLEVKSGYEVAMTGSVTLHAKCKTGGLLSLDIPAALDLNTGLSNNKGVLLFDQ >Mature_158_residues MNTRQYIRSFLVAALLMATITGQSKAQNFSETCRNISLQGKYLSAVCMTSMKCTPGIESPCICDFLGMNCRIGRPTAIDL NQGISNLAGALKFKGTNFSTTCSNLHLEVKSGYEVAMTGSVTLHAKCKTGGLLSLDIPAALDLNTGLSNNKGVLLFDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16879; Mature: 16879
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRQYIRSFLVAALLMATITGQSKAQNFSETCRNISLQGKYLSAVCMTSMKCTPGIESP CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC CICDFLGMNCRIGRPTAIDLNQGISNLAGALKFKGTNFSTTCSNLHLEVKSGYEVAMTGS CEEHHCCCCEECCCCCEEEHHCCHHHHHHEEEECCCCCEEEECEEEEEECCCEEEEEECC VTLHAKCKTGGLLSLDIPAALDLNTGLSNNKGVLLFDQ EEEEEEECCCCEEEECCCCEEECCCCCCCCCCEEEEEC >Mature Secondary Structure MNTRQYIRSFLVAALLMATITGQSKAQNFSETCRNISLQGKYLSAVCMTSMKCTPGIESP CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC CICDFLGMNCRIGRPTAIDLNQGISNLAGALKFKGTNFSTTCSNLHLEVKSGYEVAMTGS CEEHHCCCCEECCCCCEEEHHCCHHHHHHEEEECCCCCEEEECEEEEEECCCEEEEEECC VTLHAKCKTGGLLSLDIPAALDLNTGLSNNKGVLLFDQ EEEEEEECCCCEEEECCCCEEECCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA