Definition Geobacter lovleyi SZ chromosome, complete genome.
Accession NC_010814
Length 3,917,761

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The map label for this gene is livJ [C]

Identifier: 189423785

GI number: 189423785

Start: 732213

End: 734687

Strand: Reverse

Name: livJ [C]

Synonym: Glov_0716

Alternate gene names: 189423785

Gene position: 734687-732213 (Counterclockwise)

Preceding gene: 189423786

Following gene: 189423784

Centisome position: 18.75

GC content: 60.04

Gene sequence:

>2475_bases
ATGAAAATCCGTCCGTTTTTGCTGCTGCAGATATTGTTACTCTGCACCCTGCTGGTACAGGGGGGCTGTTCATCATCTTC
TTCATCCTCCAGCAGCACGCCCCAGACCATATCGATCGGTGTCCTGGCGCCGCTCACCGGCAGCCTGAAACATATCGGGG
AAGGGATGCAGGCGGCACTTACGGTCGGCCTGCCCCAGGTAAACCGGCGGCTTACTCTGGAAGGGCAGAATTTCAGGCTC
ACAACCGTGGTGAAAGATACGGCCTCCGATCCGCAAGGGGCTTTGCTGGCCCTGTTGGCGCTCAAGGCCCAGGGGATCAG
GTTTGTCATCGGTCCCGTCAGCAGTGCCGAGTGTGCGGCGATCCTGCCGATGGCAAACTCGCTGGGCATGATCCTGATAA
GTCCGGCCAGTACCGCAACCTCGCTGGCCATCGCCGGTGATAACCTGTTCCGGCTGATGCCCAACGACAACAGCCAGGGG
GCCGGTACAGCCGCCTTGATGTTGAAAAAGGGATTCACGGCAATGGTTCCGGTCTGGCGCGGCGATGTCTGGGGTGATGA
CCTCAAGACAAGCATCACCACCGCCTTCCAGACCGGCGGTGGCACGGTATTGAGCGGTGTCCGTTATGCTCCCGGCGCCG
GCGCGTATGACTCGGAGCTTGATCAGGCAGCCGCCCAGGTTTCACAGGCATTAACCACCCATGGAGCCGGCAAGGTGGCG
GTGGTGATGATTTCCTATCCGACCGACTCGGTTGCCCTGCTGAACGCTGCAGCAAGCAGGCCGTCGCTGGCACAAGCCGC
TTGGTTCGGCAGCGATGCCTCAACCCTCTCCCCCCTGATTACCGCTTCAGCCACCGCCTCCGCCTTTGCGGCGCAGACCA
ACCTGCTGTCTCCGATCTTCAGCAGGGAAGATGTGGTGCTGCCTTTGCCGGGCACCGTACTGATCGACCGCGCACTGCGC
GAAAAGCTTTCGCAACAGCTCGGCCGTCAGGCCGACAGCACCACCTTCGCCACCTGGGATGCGTTGTGGCTGACCGCCAA
GACCTACACCGCCAGCGGTATCAATGCCGATACCGAAACACTGAAAACAGGGCTGGTCGCTACTGCAAAGAGCAACGTCG
GGCTGAACGGCGCATTGGTAATGAATGCGGCAGGCGACATGAACAAAGGTAACTATGCCTTCTACAGCATCGCGGCAAAC
GGCAGCAGCTATGCCTGGCAACTCAAGGCCGCCTATCAGTACGAACAGCAGGCAACCCCGAAGATTATCGATGTCTCAGA
GCCGGTTCTGAAGGGGCTCACCCCTCCCGCGGCAGAGGTCAGGATCGGCGCCCTGCTGAGTCTGACCGGCAGCCAATCCT
ACAATGGCCGCTCAATCAGGGCCGGCCTGGTGGCAGCATGTGACAACATCAACACCTACCTCACCCGGCACGGCTATCCG
GTCAAGATAGCGCTGGACATTATCGACACCGGCTCCGATGCCGACCAGGCATTGGCCGGTTTTACGACACTGGCTGATCG
CGGGATCAGGTTCATTGTCGGTCCGGTGACCAGCGCTGAGTGCCAGCGGGTGCTATCGGCAGCCAACAGCCGCGGTGTCA
TCCTGCTCAGTCCGTCAAGTAATGCCATCCAGCTGGCACAACCCGGCGACAACCTGATCCGTTTTGTACCGAGCGCAACG
CTTGAGGCCCAGGCCCTGGCCATGCTCTTGTATGAACAGGGGGTGCGCTCCCTGGCAATCATGGCCCGCAACGACATCTG
GGGAACGGATCTGGCAAGCCGTACCGCCAGTGAATTTCAGGCGCTGGGCGGAACGATCATGACCAGCGTCACCTATCCGA
CGGACACCGTCAATTTTGCCGGCCAGCTGGCCACCCTTGCCGGTGCCCTGAACTCGGCTACACCGGCAAGTACCGCAGTG
TTGACCGCCTCCTTTGATGAAATCACCGAGATCTTTCTCCAGGCCCCCGCGTACCCCTCCCTTGCCACGGTAAAGTGGTA
CGGCAGCGACGGATCGGCCCAGAATGAACGGCTTGCAGCAACCCCTGCAGCAGCAGCCTATGCTGCGGCACGCAGCTTCA
CCTGCCCGATCGAGCATGTCTTTATCCAGCACGCGCCCCAGCCGAACTCGATTACAAAGCTGGTTATCCGGGACGACATC
CGGGAGGCCTATAACGGTATCCCCGCGCTTTACGCCTACCCGGCCTGGGATGCCCTCTGGATCATCGTAACGGCGTTGCT
CGACAGTGAATGGTCAACCGACCCGACGGTGCTGCGAAGCGCTGTCCTGAGCGGGTCGGACCACTACATCGGCATGAGCA
ACTTCATGGGGCTGGATGCAAACGGTGACAGAAAATACGGTGACTATGCCTTTTTCACCCTGACGCAGGGCACTGCCGCC
TATAGCTGGAACCCTTTTGCAACCTTCCATTACCATCCGGTTCTCTACCTGACACCGAAAATAACCTATCCTTAG

Upstream 100 bases:

>100_bases
GCTCCTGAAACCCGGGAATACTGCATAACAAGCTGCAATTAGTCTAATTCCCCTGCAGCGCAATCAAGTTGCGCCGCAGT
CAATTGCAAGGAGTGCTACG

Downstream 100 bases:

>100_bases
GAGCAAAACATGGCATGCAAGACGCAAGACAGCAGCAGCAAGCCTACCGGTAGCGATGTCCCGACCCCGGTAGCCGGCAT
GGCCGGTCACCGGGTGGCGG

Product: extracellular ligand-binding receptor

Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 824; Mature: 824

Protein sequence:

>824_residues
MKIRPFLLLQILLLCTLLVQGGCSSSSSSSSSTPQTISIGVLAPLTGSLKHIGEGMQAALTVGLPQVNRRLTLEGQNFRL
TTVVKDTASDPQGALLALLALKAQGIRFVIGPVSSAECAAILPMANSLGMILISPASTATSLAIAGDNLFRLMPNDNSQG
AGTAALMLKKGFTAMVPVWRGDVWGDDLKTSITTAFQTGGGTVLSGVRYAPGAGAYDSELDQAAAQVSQALTTHGAGKVA
VVMISYPTDSVALLNAAASRPSLAQAAWFGSDASTLSPLITASATASAFAAQTNLLSPIFSREDVVLPLPGTVLIDRALR
EKLSQQLGRQADSTTFATWDALWLTAKTYTASGINADTETLKTGLVATAKSNVGLNGALVMNAAGDMNKGNYAFYSIAAN
GSSYAWQLKAAYQYEQQATPKIIDVSEPVLKGLTPPAAEVRIGALLSLTGSQSYNGRSIRAGLVAACDNINTYLTRHGYP
VKIALDIIDTGSDADQALAGFTTLADRGIRFIVGPVTSAECQRVLSAANSRGVILLSPSSNAIQLAQPGDNLIRFVPSAT
LEAQALAMLLYEQGVRSLAIMARNDIWGTDLASRTASEFQALGGTIMTSVTYPTDTVNFAGQLATLAGALNSATPASTAV
LTASFDEITEIFLQAPAYPSLATVKWYGSDGSAQNERLAATPAAAAYAAARSFTCPIEHVFIQHAPQPNSITKLVIRDDI
REAYNGIPALYAYPAWDALWIIVTALLDSEWSTDPTVLRSAVLSGSDHYIGMSNFMGLDANGDRKYGDYAFFTLTQGTAA
YSWNPFATFHYHPVLYLTPKITYP

Sequences:

>Translated_824_residues
MKIRPFLLLQILLLCTLLVQGGCSSSSSSSSSTPQTISIGVLAPLTGSLKHIGEGMQAALTVGLPQVNRRLTLEGQNFRL
TTVVKDTASDPQGALLALLALKAQGIRFVIGPVSSAECAAILPMANSLGMILISPASTATSLAIAGDNLFRLMPNDNSQG
AGTAALMLKKGFTAMVPVWRGDVWGDDLKTSITTAFQTGGGTVLSGVRYAPGAGAYDSELDQAAAQVSQALTTHGAGKVA
VVMISYPTDSVALLNAAASRPSLAQAAWFGSDASTLSPLITASATASAFAAQTNLLSPIFSREDVVLPLPGTVLIDRALR
EKLSQQLGRQADSTTFATWDALWLTAKTYTASGINADTETLKTGLVATAKSNVGLNGALVMNAAGDMNKGNYAFYSIAAN
GSSYAWQLKAAYQYEQQATPKIIDVSEPVLKGLTPPAAEVRIGALLSLTGSQSYNGRSIRAGLVAACDNINTYLTRHGYP
VKIALDIIDTGSDADQALAGFTTLADRGIRFIVGPVTSAECQRVLSAANSRGVILLSPSSNAIQLAQPGDNLIRFVPSAT
LEAQALAMLLYEQGVRSLAIMARNDIWGTDLASRTASEFQALGGTIMTSVTYPTDTVNFAGQLATLAGALNSATPASTAV
LTASFDEITEIFLQAPAYPSLATVKWYGSDGSAQNERLAATPAAAAYAAARSFTCPIEHVFIQHAPQPNSITKLVIRDDI
REAYNGIPALYAYPAWDALWIIVTALLDSEWSTDPTVLRSAVLSGSDHYIGMSNFMGLDANGDRKYGDYAFFTLTQGTAA
YSWNPFATFHYHPVLYLTPKITYP
>Mature_824_residues
MKIRPFLLLQILLLCTLLVQGGCSSSSSSSSSTPQTISIGVLAPLTGSLKHIGEGMQAALTVGLPQVNRRLTLEGQNFRL
TTVVKDTASDPQGALLALLALKAQGIRFVIGPVSSAECAAILPMANSLGMILISPASTATSLAIAGDNLFRLMPNDNSQG
AGTAALMLKKGFTAMVPVWRGDVWGDDLKTSITTAFQTGGGTVLSGVRYAPGAGAYDSELDQAAAQVSQALTTHGAGKVA
VVMISYPTDSVALLNAAASRPSLAQAAWFGSDASTLSPLITASATASAFAAQTNLLSPIFSREDVVLPLPGTVLIDRALR
EKLSQQLGRQADSTTFATWDALWLTAKTYTASGINADTETLKTGLVATAKSNVGLNGALVMNAAGDMNKGNYAFYSIAAN
GSSYAWQLKAAYQYEQQATPKIIDVSEPVLKGLTPPAAEVRIGALLSLTGSQSYNGRSIRAGLVAACDNINTYLTRHGYP
VKIALDIIDTGSDADQALAGFTTLADRGIRFIVGPVTSAECQRVLSAANSRGVILLSPSSNAIQLAQPGDNLIRFVPSAT
LEAQALAMLLYEQGVRSLAIMARNDIWGTDLASRTASEFQALGGTIMTSVTYPTDTVNFAGQLATLAGALNSATPASTAV
LTASFDEITEIFLQAPAYPSLATVKWYGSDGSAQNERLAATPAAAAYAAARSFTCPIEHVFIQHAPQPNSITKLVIRDDI
REAYNGIPALYAYPAWDALWIIVTALLDSEWSTDPTVLRSAVLSGSDHYIGMSNFMGLDANGDRKYGDYAFFTLTQGTAA
YSWNPFATFHYHPVLYLTPKITYP

Specific function: This Protein Is A Component Of The Leucine, Isoleucine, Valine, (Threonine) Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids. [C]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 86635; Mature: 86635

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRPFLLLQILLLCTLLVQGGCSSSSSSSSSTPQTISIGVLAPLTGSLKHIGEGMQAAL
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCEEE
TVGLPQVNRRLTLEGQNFRLTTVVKDTASDPQGALLALLALKAQGIRFVIGPVSSAECAA
EECCCCCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEE
ILPMANSLGMILISPASTATSLAIAGDNLFRLMPNDNSQGAGTAALMLKKGFTAMVPVWR
EEECCCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEECCCCEEEEEEEC
GDVWGDDLKTSITTAFQTGGGTVLSGVRYAPGAGAYDSELDQAAAQVSQALTTHGAGKVA
CCCCCCCHHHHHHEEEECCCCCEECCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
VVMISYPTDSVALLNAAASRPSLAQAAWFGSDASTLSPLITASATASAFAAQTNLLSPIF
EEEEECCCCCCHHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SREDVVLPLPGTVLIDRALREKLSQQLGRQADSTTFATWDALWLTAKTYTASGINADTET
CCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCCCCCCHHH
LKTGLVATAKSNVGLNGALVMNAAGDMNKGNYAFYSIAANGSSYAWQLKAAYQYEQQATP
HHHCEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEHHHHHCCCC
KIIDVSEPVLKGLTPPAAEVRIGALLSLTGSQSYNGRSIRAGLVAACDNINTYLTRHGYP
CEEECCCHHHHCCCCCHHHEEEEEEEEECCCCCCCCCEEHHHHHHHHCCCCHHHHCCCCE
VKIALDIIDTGSDADQALAGFTTLADRGIRFIVGPVTSAECQRVLSAANSRGVILLSPSS
EEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCEEEECCCC
NAIQLAQPGDNLIRFVPSATLEAQALAMLLYEQGVRSLAIMARNDIWGTDLASRTASEFQ
CEEEEECCCCHHEEECCCCCHHHHHHHHHHHHHCHHHEEEEECCCCCCCCHHHHHHHHHH
ALGGTIMTSVTYPTDTVNFAGQLATLAGALNSATPASTAVLTASFDEITEIFLQAPAYPS
HCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHCCCCCCC
LATVKWYGSDGSAQNERLAATPAAAAYAAARSFTCPIEHVFIQHAPQPNSITKLVIRDDI
EEEEEEECCCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHEECCCCCCCCEEEEEHHHH
REAYNGIPALYAYPAWDALWIIVTALLDSEWSTDPTVLRSAVLSGSDHYIGMSNFMGLDA
HHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEHHHCCCCCC
NGDRKYGDYAFFTLTQGTAAYSWNPFATFHYHPVLYLTPKITYP
CCCCCCCCEEEEEEECCCEEECCCCCEEEEECEEEEEECEECCC
>Mature Secondary Structure
MKIRPFLLLQILLLCTLLVQGGCSSSSSSSSSTPQTISIGVLAPLTGSLKHIGEGMQAAL
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCEEE
TVGLPQVNRRLTLEGQNFRLTTVVKDTASDPQGALLALLALKAQGIRFVIGPVSSAECAA
EECCCCCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEE
ILPMANSLGMILISPASTATSLAIAGDNLFRLMPNDNSQGAGTAALMLKKGFTAMVPVWR
EEECCCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEECCCCEEEEEEEC
GDVWGDDLKTSITTAFQTGGGTVLSGVRYAPGAGAYDSELDQAAAQVSQALTTHGAGKVA
CCCCCCCHHHHHHEEEECCCCCEECCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
VVMISYPTDSVALLNAAASRPSLAQAAWFGSDASTLSPLITASATASAFAAQTNLLSPIF
EEEEECCCCCCHHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SREDVVLPLPGTVLIDRALREKLSQQLGRQADSTTFATWDALWLTAKTYTASGINADTET
CCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCCCCCCHHH
LKTGLVATAKSNVGLNGALVMNAAGDMNKGNYAFYSIAANGSSYAWQLKAAYQYEQQATP
HHHCEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEHHHHHCCCC
KIIDVSEPVLKGLTPPAAEVRIGALLSLTGSQSYNGRSIRAGLVAACDNINTYLTRHGYP
CEEECCCHHHHCCCCCHHHEEEEEEEEECCCCCCCCCEEHHHHHHHHCCCCHHHHCCCCE
VKIALDIIDTGSDADQALAGFTTLADRGIRFIVGPVTSAECQRVLSAANSRGVILLSPSS
EEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCEEEECCCC
NAIQLAQPGDNLIRFVPSATLEAQALAMLLYEQGVRSLAIMARNDIWGTDLASRTASEFQ
CEEEEECCCCHHEEECCCCCHHHHHHHHHHHHHCHHHEEEEECCCCCCCCHHHHHHHHHH
ALGGTIMTSVTYPTDTVNFAGQLATLAGALNSATPASTAVLTASFDEITEIFLQAPAYPS
HCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHCCCCCCC
LATVKWYGSDGSAQNERLAATPAAAAYAAARSFTCPIEHVFIQHAPQPNSITKLVIRDDI
EEEEEEECCCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHEECCCCCCCCEEEEEHHHH
REAYNGIPALYAYPAWDALWIIVTALLDSEWSTDPTVLRSAVLSGSDHYIGMSNFMGLDA
HHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEHHHCCCCCC
NGDRKYGDYAFFTLTQGTAAYSWNPFATFHYHPVLYLTPKITYP
CCCCCCCCEEEEEEECCCEEECCCCCEEEEECEEEEEECEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]

Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]