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The map label for this gene is yckA [H]

Identifier: 189423783

GI number: 189423783

Start: 729808

End: 732075

Strand: Reverse

Name: yckA [H]

Synonym: Glov_0714

Alternate gene names: 189423783

Gene position: 732075-729808 (Counterclockwise)

Preceding gene: 189423784

Following gene: 189423782

Centisome position: 18.69

GC content: 56.61

Gene sequence:

>2268_bases
ATGAAACGGGCATTACTGACAATTATGGCGCTGCTGCTGTTCCTTGCCTGCAGCAGCGGTTGCAGGAAACAGGAAAAGCC
GATCACCACACTGGATGATGCCAAAACCGCCAGGATCGGCGTCATGATCGGCACAACCGGCGAACAGATTACCAAAGAGC
GTTTTCCCCGGGCTCAGGTCAAGAGCTTTGATGACGTGATGGATGCGGTGGCTGCCATGAAATCAGGGCAGCTGGAGGCG
ATCGTCACGGCCTATCCGACCGCACTGCAGGTCGCCAAGCTCAACCGGGAATTTACCTTCCTGAAACAGGAACCGCTCAG
TAATGAAGACAGTTCCATCGCCCTCAGAAAGGGGGAGGAACAGCTGCTGGCGGACCTGAACCGGGTCATTGCCGAGTTGC
AGGCGGACGGTACTCTTGCCGCCATGAAAAAGCGCTGGTTCAAAGATGACTTGAGCCCCTATCAAGAGCCGGATCTTCCC
CTGCCCACAGCAGGTAAGCCGCTGAAAATCGGGGTATGTGCCACCCGTGAGCCGCTCAGCTTTGTGGACAAGAGCGGCCG
GATCAGCGGTCATGACGGCGAACTGGCCCGTTGGGTCAGCATCAGGCTCAACCGCCCGATCGAGTTCCTGAACATGAAAT
TCATGGCGTTGATACCGGCCCTGCAGTCAGGCAAGATCGACCTGATTATCAGTGGTATGACCGCCACCGCTGAACGCAAA
AAAACAGTCAACTTCACCCAACCCTACTTTGCCAATGCCCAGGTCATGCTGGTCAGGAAGCCCGGCGTTACACCGCCCGC
AAGCCAAAGCGGAGCCACTAAACTCAGCTCTGCCGATGATCTGAAGGACAAACGGATCGGCGTACTGCTGGGCTCGGTCC
ATGACACCTACGCCACCAAACAGTATCCCCGGGCCACCGTCCTGCAGTACAAAAGCCCCTCCGACCTGGTGCTGGCGGTC
AAGTCCGGCAAGGTAGATGCAGCCTTTTATACCCACGAGACCCTGCTGGAAGTGCTGCGGCAGGACCCCGAGCTGGCGCT
GCTGGGCAAACCGCTCTTTTCCGTGCCGATCGGCGTCGGCTTCAACAAGACCAACGACACCTTGCGTACTCAGTTCAACA
GTTTCCTGAAGCAGATCAGGGGAAGCGGCCTGTTTAACGACATGGTCACCCGCTGGATCCTGCAGGGCAGTACCCGGATG
CCGAAAGTTGACGGGGCAAAGAGCAAGGGCCGACTGGTGATCGGCATTGTCAGTGACAAAGGGATGCCGTTTACCATCAT
GAAAGACAACAGAATGATCGGCTTTGATGTTGAACTGGCTGAACGGTTTGCCGCCTGGCTGGGCAAGGAGCCGGTTTTTG
CCGACATGGAGTTTGGCAGCCTGATCGCCGCCGCCTCAACCAACAAGATCGACGCCATCTTCAGCACCCTGATGATTACT
GACGAGCGTAAAAAGCAGGTCGCCTTTTCAGACCCGTACTACGAACTGGGGGCCAGCGTCTTTGCACTGAAAAAGAATAT
TGCTGAGTCTGCCATCAAAAGCGACAGTCCCAAGGTGGTCACCCCCTCCTTTTTCAGCGACCTTGTCACCAGTTTTCAGA
GCAACATCATCCATGAGAGGCGGTATCTGCTGATCCTGGACGGTCTCAAGACCACCGTGGTCATCTCGGTCTTCGCCACC
CTCTTCGGCACCCTGCTGGGGGCGCTGATCTGCTTCATGCGGATGGCAAAGAGCAGGCTGCTCTCTGCCCCTGCCAGGCT
CTACATCGCCATCCTGCGGGGCACACCGGTACTGGTGCTGTTGATGCTGATCTTCTATGTCGTCTTTGCCTCGATCAACA
TCAACCCGGTCATTGTGGCGGTGATCGCCTTTGGCATGAACTTCGGCGCCTACACCGCCGAGATCTTCAGGACCGGCATT
GAAGGGGTGGAAAAGGGACAGACCGAGGCTGGTATCTCTTTGGGCTTCACCAGGACCAGCACCTTCCTGCATATTGTGCT
GCCCCAGATGGTGCGGCGGATCCTGCCGGTCTACAAAGGCGAGTTCATCTCCCTGGTCAAGATGACCTCCATTGTCGGCT
ACATCGCCGTACAGGATCTGACCAAGGCCAGCGACATCATCCGCAGCCGCACCTTTGACGCCTTCTTTCCCCTGGTCATG
GTGGCCATCCTCTACTTCCTGATCTCATGGACACTGATGCAATCCCTTGAGTACCTGGAACGGATCACTGATCCCAAATA
CAAAAAGAGAAAGGCAGGCAGGGCATGA

Upstream 100 bases:

>100_bases
GCAAGCCTACCGGTAGCGATGTCCCGACCCCGGTAGCCGGCATGGCCGGTCACCGGGTGGCGGTACAGAAGCGACAGTCC
CTGAAACATGAGGTTGCGGT

Downstream 100 bases:

>100_bases
TCAGGGTAGCACACCTCTCAAAGACCTACGGTGAGGTCACCGTACTGAAAGACATCTCCCTCAGCGTTGCCAAGGGAGAA
GTCATCTCCATCATCGGACC

Product: polar amino acid ABC transporter inner membrane protein

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 755; Mature: 755

Protein sequence:

>755_residues
MKRALLTIMALLLFLACSSGCRKQEKPITTLDDAKTARIGVMIGTTGEQITKERFPRAQVKSFDDVMDAVAAMKSGQLEA
IVTAYPTALQVAKLNREFTFLKQEPLSNEDSSIALRKGEEQLLADLNRVIAELQADGTLAAMKKRWFKDDLSPYQEPDLP
LPTAGKPLKIGVCATREPLSFVDKSGRISGHDGELARWVSIRLNRPIEFLNMKFMALIPALQSGKIDLIISGMTATAERK
KTVNFTQPYFANAQVMLVRKPGVTPPASQSGATKLSSADDLKDKRIGVLLGSVHDTYATKQYPRATVLQYKSPSDLVLAV
KSGKVDAAFYTHETLLEVLRQDPELALLGKPLFSVPIGVGFNKTNDTLRTQFNSFLKQIRGSGLFNDMVTRWILQGSTRM
PKVDGAKSKGRLVIGIVSDKGMPFTIMKDNRMIGFDVELAERFAAWLGKEPVFADMEFGSLIAAASTNKIDAIFSTLMIT
DERKKQVAFSDPYYELGASVFALKKNIAESAIKSDSPKVVTPSFFSDLVTSFQSNIIHERRYLLILDGLKTTVVISVFAT
LFGTLLGALICFMRMAKSRLLSAPARLYIAILRGTPVLVLLMLIFYVVFASININPVIVAVIAFGMNFGAYTAEIFRTGI
EGVEKGQTEAGISLGFTRTSTFLHIVLPQMVRRILPVYKGEFISLVKMTSIVGYIAVQDLTKASDIIRSRTFDAFFPLVM
VAILYFLISWTLMQSLEYLERITDPKYKKRKAGRA

Sequences:

>Translated_755_residues
MKRALLTIMALLLFLACSSGCRKQEKPITTLDDAKTARIGVMIGTTGEQITKERFPRAQVKSFDDVMDAVAAMKSGQLEA
IVTAYPTALQVAKLNREFTFLKQEPLSNEDSSIALRKGEEQLLADLNRVIAELQADGTLAAMKKRWFKDDLSPYQEPDLP
LPTAGKPLKIGVCATREPLSFVDKSGRISGHDGELARWVSIRLNRPIEFLNMKFMALIPALQSGKIDLIISGMTATAERK
KTVNFTQPYFANAQVMLVRKPGVTPPASQSGATKLSSADDLKDKRIGVLLGSVHDTYATKQYPRATVLQYKSPSDLVLAV
KSGKVDAAFYTHETLLEVLRQDPELALLGKPLFSVPIGVGFNKTNDTLRTQFNSFLKQIRGSGLFNDMVTRWILQGSTRM
PKVDGAKSKGRLVIGIVSDKGMPFTIMKDNRMIGFDVELAERFAAWLGKEPVFADMEFGSLIAAASTNKIDAIFSTLMIT
DERKKQVAFSDPYYELGASVFALKKNIAESAIKSDSPKVVTPSFFSDLVTSFQSNIIHERRYLLILDGLKTTVVISVFAT
LFGTLLGALICFMRMAKSRLLSAPARLYIAILRGTPVLVLLMLIFYVVFASININPVIVAVIAFGMNFGAYTAEIFRTGI
EGVEKGQTEAGISLGFTRTSTFLHIVLPQMVRRILPVYKGEFISLVKMTSIVGYIAVQDLTKASDIIRSRTFDAFFPLVM
VAILYFLISWTLMQSLEYLERITDPKYKKRKAGRA
>Mature_755_residues
MKRALLTIMALLLFLACSSGCRKQEKPITTLDDAKTARIGVMIGTTGEQITKERFPRAQVKSFDDVMDAVAAMKSGQLEA
IVTAYPTALQVAKLNREFTFLKQEPLSNEDSSIALRKGEEQLLADLNRVIAELQADGTLAAMKKRWFKDDLSPYQEPDLP
LPTAGKPLKIGVCATREPLSFVDKSGRISGHDGELARWVSIRLNRPIEFLNMKFMALIPALQSGKIDLIISGMTATAERK
KTVNFTQPYFANAQVMLVRKPGVTPPASQSGATKLSSADDLKDKRIGVLLGSVHDTYATKQYPRATVLQYKSPSDLVLAV
KSGKVDAAFYTHETLLEVLRQDPELALLGKPLFSVPIGVGFNKTNDTLRTQFNSFLKQIRGSGLFNDMVTRWILQGSTRM
PKVDGAKSKGRLVIGIVSDKGMPFTIMKDNRMIGFDVELAERFAAWLGKEPVFADMEFGSLIAAASTNKIDAIFSTLMIT
DERKKQVAFSDPYYELGASVFALKKNIAESAIKSDSPKVVTPSFFSDLVTSFQSNIIHERRYLLILDGLKTTVVISVFAT
LFGTLLGALICFMRMAKSRLLSAPARLYIAILRGTPVLVLLMLIFYVVFASININPVIVAVIAFGMNFGAYTAEIFRTGI
EGVEKGQTEAGISLGFTRTSTFLHIVLPQMVRRILPVYKGEFISLVKMTSIVGYIAVQDLTKASDIIRSRTFDAFFPLVM
VAILYFLISWTLMQSLEYLERITDPKYKKRKAGRA

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787085, Length=238, Percent_Identity=28.9915966386555, Blast_Score=119, Evalue=1e-27,
Organism=Escherichia coli, GI1787088, Length=235, Percent_Identity=27.2340425531915, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1788226, Length=194, Percent_Identity=35.0515463917526, Blast_Score=117, Evalue=4e-27,
Organism=Escherichia coli, GI1787030, Length=201, Percent_Identity=34.3283582089552, Blast_Score=106, Evalue=6e-24,
Organism=Escherichia coli, GI1788646, Length=210, Percent_Identity=27.6190476190476, Blast_Score=96, Evalue=9e-21,
Organism=Escherichia coli, GI1788648, Length=235, Percent_Identity=26.3829787234043, Blast_Score=96, Evalue=1e-20,
Organism=Escherichia coli, GI1786873, Length=220, Percent_Identity=30.4545454545455, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1788649, Length=237, Percent_Identity=27.8481012658228, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1787031, Length=231, Percent_Identity=24.2424242424242, Blast_Score=84, Evalue=5e-17,
Organism=Escherichia coli, GI1788228, Length=131, Percent_Identity=33.587786259542, Blast_Score=84, Evalue=5e-17,
Organism=Escherichia coli, GI1787087, Length=203, Percent_Identity=26.6009852216749, Blast_Score=83, Evalue=8e-17,
Organism=Escherichia coli, GI1788645, Length=218, Percent_Identity=29.3577981651376, Blast_Score=82, Evalue=2e-16,
Organism=Escherichia coli, GI1787086, Length=212, Percent_Identity=26.8867924528302, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786874, Length=212, Percent_Identity=23.1132075471698, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 83522; Mature: 83522

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRALLTIMALLLFLACSSGCRKQEKPITTLDDAKTARIGVMIGTTGEQITKERFPRAQV
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCHHHH
KSFDDVMDAVAAMKSGQLEAIVTAYPTALQVAKLNREFTFLKQEPLSNEDSSIALRKGEE
HHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCHH
QLLADLNRVIAELQADGTLAAMKKRWFKDDLSPYQEPDLPLPTAGKPLKIGVCATREPLS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHH
FVDKSGRISGHDGELARWVSIRLNRPIEFLNMKFMALIPALQSGKIDLIISGMTATAERK
HHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHC
KTVNFTQPYFANAQVMLVRKPGVTPPASQSGATKLSSADDLKDKRIGVLLGSVHDTYATK
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEECHHHHHHHC
QYPRATVLQYKSPSDLVLAVKSGKVDAAFYTHETLLEVLRQDPELALLGKPLFSVPIGVG
CCCCCEEEEECCCCCEEEEEECCCEEEEHHHHHHHHHHHHCCCCEEEECCCHHHCCCCCC
FNKTNDTLRTQFNSFLKQIRGSGLFNDMVTRWILQGSTRMPKVDGAKSKGRLVIGIVSDK
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
GMPFTIMKDNRMIGFDVELAERFAAWLGKEPVFADMEFGSLIAAASTNKIDAIFSTLMIT
CCEEEEEECCEEEEEEHHHHHHHHHHHCCCCCEECCCCCCEEEECCCCHHHHHHHHHHHC
DERKKQVAFSDPYYELGASVFALKKNIAESAIKSDSPKVVTPSFFSDLVTSFQSNIIHER
CCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHCC
RYLLILDGLKTTVVISVFATLFGTLLGALICFMRMAKSRLLSAPARLYIAILRGTPVLVL
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHCCCHHHHH
LMLIFYVVFASININPVIVAVIAFGMNFGAYTAEIFRTGIEGVEKGQTEAGISLGFTRTS
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHH
TFLHIVLPQMVRRILPVYKGEFISLVKMTSIVGYIAVQDLTKASDIIRSRTFDAFFPLVM
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAILYFLISWTLMQSLEYLERITDPKYKKRKAGRA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
>Mature Secondary Structure
MKRALLTIMALLLFLACSSGCRKQEKPITTLDDAKTARIGVMIGTTGEQITKERFPRAQV
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCHHHH
KSFDDVMDAVAAMKSGQLEAIVTAYPTALQVAKLNREFTFLKQEPLSNEDSSIALRKGEE
HHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCHH
QLLADLNRVIAELQADGTLAAMKKRWFKDDLSPYQEPDLPLPTAGKPLKIGVCATREPLS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHH
FVDKSGRISGHDGELARWVSIRLNRPIEFLNMKFMALIPALQSGKIDLIISGMTATAERK
HHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHC
KTVNFTQPYFANAQVMLVRKPGVTPPASQSGATKLSSADDLKDKRIGVLLGSVHDTYATK
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEECHHHHHHHC
QYPRATVLQYKSPSDLVLAVKSGKVDAAFYTHETLLEVLRQDPELALLGKPLFSVPIGVG
CCCCCEEEEECCCCCEEEEEECCCEEEEHHHHHHHHHHHHCCCCEEEECCCHHHCCCCCC
FNKTNDTLRTQFNSFLKQIRGSGLFNDMVTRWILQGSTRMPKVDGAKSKGRLVIGIVSDK
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
GMPFTIMKDNRMIGFDVELAERFAAWLGKEPVFADMEFGSLIAAASTNKIDAIFSTLMIT
CCEEEEEECCEEEEEEHHHHHHHHHHHCCCCCEECCCCCCEEEECCCCHHHHHHHHHHHC
DERKKQVAFSDPYYELGASVFALKKNIAESAIKSDSPKVVTPSFFSDLVTSFQSNIIHER
CCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHCC
RYLLILDGLKTTVVISVFATLFGTLLGALICFMRMAKSRLLSAPARLYIAILRGTPVLVL
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHCCCHHHHH
LMLIFYVVFASININPVIVAVIAFGMNFGAYTAEIFRTGIEGVEKGQTEAGISLGFTRTS
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHH
TFLHIVLPQMVRRILPVYKGEFISLVKMTSIVGYIAVQDLTKASDIIRSRTFDAFFPLVM
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAILYFLISWTLMQSLEYLERITDPKYKKRKAGRA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7704255; 8969502; 9384377 [H]