| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423716
Identifier: 189423716
GI number: 189423716
Start: 651472
End: 652920
Strand: Reverse
Name: 189423716
Synonym: Glov_0647
Alternate gene names: NA
Gene position: 652920-651472 (Counterclockwise)
Preceding gene: 189423717
Following gene: 189423715
Centisome position: 16.67
GC content: 57.42
Gene sequence:
>1449_bases ATGCCGCCACTCTCCAGCCCCGCCAGCTCCGGGCCCAAGACGTCCTACCACGAGTTTTATGCCGACGACTTCAGTCCCCG TGACCATTACCGCCTGCTCTGGGATCATATCCGCGCCACCGGCAACAATGCACTGGAGACCAAAGATCACGAATCCCAGC TGGCACTGCAGACCGAAGGGGTCACCTTTACGGTCTACGGCGAGAGCGAAGAAGGGATCGAGCGGATCTGGCCCTTTGAC CTGATCCCCCGCATCATCACCGCACCGGAGTGGAGCCGGATTGAATCCGGCCTCAAGCAGCGGGTCAAGGCGCTGAACCT GTTTCTGGAAGACCTCTACGGCGAACAGAAAATCATCAAGGACGGTGTGATTCCGCCGGAACTGATCTACCAGGGCAAGG ACTTCCGGCGTGAGATCGTTGGCATTGTCCCGCCCCGAGGCATCTATACCCATATCAGCGGCATTGACATTATCCGTGAT GAACAGGGTGATTTCCTGATTCTGGAAGACAACCTGCGTACCCCCTCCGGTGTCTCCTACATGATTGAAAACCGGGTAAT TGAACGGCGCATTCTGCCGGAATTTTTCAACAAATACCGGGTACGCCGGGTTGAGCACTACCCGTCACTGCTGCTGGATG CCTTGCGCTGCCTCTCACCCCGCGGCAAAGGAACAGCTGAAATTGTATTGCTGACCCCCGGCATCTACAACTCTGCCTAT TTTGAGCACACCTTCCTGGCCAAGGAGATGGGGATCGAGCTGGCTGAAGGGCGCGACATGGTCACCATCAACGACATCGT CTATCTCAAGACCACCAAAGGGCTGAAGCGGGTGGATGTGATCTACCGCCGGATTGATGACGACTACCTTGATCCGCTGA TCTTCCGCTCCGACTCATCACTGGGGATTGCCGGGGTAATCAATGCCTGGCGGGCAGGCAATGTCGCCATCGTCAATGCA CCGGGCAGCGGCATTGCCGATGACAAGGCGGTCTACCCCTTTGTGCCGGACATCATCCGTTACTATCTTGGGCAGCAGCC GATTCTGAAAAACGTACCCACCTACCAGATGACCAATGCGACCGACCGGGAATATGTTTTTGACAACATGGAGCGGATGG TGGTCAAGGCGGTCAGTGAATCCGGCGGCTACGGCATGCTGATGGGGCCCTCCTCCACCCCGGCCCTGCGCAAGGAGTTT ATGGACCGGGTGCTGGAAAATCCCCGCAACTACATCGCCCAGCCGGTGGTCTACCTCTCACGGCATATCTGTTACATGGA TGGTGAGCTGGAGGCCCGCCACCTGGATCTGCGGCCGTTTGTGATCTATGGCGAGGATATTCAGGTTGTGCCTGGCGGAC TGACGCGGGTGGCCTTGCGTAAAGGCTCACTGGTGGTGAACTCTTCTCAAGGTGGTGGAAGCAAAGACACCTGGGTCCTG GCTGAGTAG
Upstream 100 bases:
>100_bases TTCAGACACTCACGCCTTGGCACAGCCTATGCTTTACTTCTGCAACAGGTTATGCAGCGCTGCATAGCCTGCAGATCCGG TTTAATGTAGGAGGTTGTAC
Downstream 100 bases:
>100_bases AGGCACATAGTTTCCGCAATCTCTACGTTGGTCTTCAGCTTAGGTTGTGCGGCGTACTGGATGTACGCCTCCGCCCAAAG CCTCGACCGCCTTGACCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MPPLSSPASSGPKTSYHEFYADDFSPRDHYRLLWDHIRATGNNALETKDHESQLALQTEGVTFTVYGESEEGIERIWPFD LIPRIITAPEWSRIESGLKQRVKALNLFLEDLYGEQKIIKDGVIPPELIYQGKDFRREIVGIVPPRGIYTHISGIDIIRD EQGDFLILEDNLRTPSGVSYMIENRVIERRILPEFFNKYRVRRVEHYPSLLLDALRCLSPRGKGTAEIVLLTPGIYNSAY FEHTFLAKEMGIELAEGRDMVTINDIVYLKTTKGLKRVDVIYRRIDDDYLDPLIFRSDSSLGIAGVINAWRAGNVAIVNA PGSGIADDKAVYPFVPDIIRYYLGQQPILKNVPTYQMTNATDREYVFDNMERMVVKAVSESGGYGMLMGPSSTPALRKEF MDRVLENPRNYIAQPVVYLSRHICYMDGELEARHLDLRPFVIYGEDIQVVPGGLTRVALRKGSLVVNSSQGGGSKDTWVL AE
Sequences:
>Translated_482_residues MPPLSSPASSGPKTSYHEFYADDFSPRDHYRLLWDHIRATGNNALETKDHESQLALQTEGVTFTVYGESEEGIERIWPFD LIPRIITAPEWSRIESGLKQRVKALNLFLEDLYGEQKIIKDGVIPPELIYQGKDFRREIVGIVPPRGIYTHISGIDIIRD EQGDFLILEDNLRTPSGVSYMIENRVIERRILPEFFNKYRVRRVEHYPSLLLDALRCLSPRGKGTAEIVLLTPGIYNSAY FEHTFLAKEMGIELAEGRDMVTINDIVYLKTTKGLKRVDVIYRRIDDDYLDPLIFRSDSSLGIAGVINAWRAGNVAIVNA PGSGIADDKAVYPFVPDIIRYYLGQQPILKNVPTYQMTNATDREYVFDNMERMVVKAVSESGGYGMLMGPSSTPALRKEF MDRVLENPRNYIAQPVVYLSRHICYMDGELEARHLDLRPFVIYGEDIQVVPGGLTRVALRKGSLVVNSSQGGGSKDTWVL AE >Mature_481_residues PPLSSPASSGPKTSYHEFYADDFSPRDHYRLLWDHIRATGNNALETKDHESQLALQTEGVTFTVYGESEEGIERIWPFDL IPRIITAPEWSRIESGLKQRVKALNLFLEDLYGEQKIIKDGVIPPELIYQGKDFRREIVGIVPPRGIYTHISGIDIIRDE QGDFLILEDNLRTPSGVSYMIENRVIERRILPEFFNKYRVRRVEHYPSLLLDALRCLSPRGKGTAEIVLLTPGIYNSAYF EHTFLAKEMGIELAEGRDMVTINDIVYLKTTKGLKRVDVIYRRIDDDYLDPLIFRSDSSLGIAGVINAWRAGNVAIVNAP GSGIADDKAVYPFVPDIIRYYLGQQPILKNVPTYQMTNATDREYVFDNMERMVVKAVSESGGYGMLMGPSSTPALRKEFM DRVLENPRNYIAQPVVYLSRHICYMDGELEARHLDLRPFVIYGEDIQVVPGGLTRVALRKGSLVVNSSQGGGSKDTWVLA E
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis RV2411c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007297 - InterPro: IPR007302 - InterPro: IPR016450 [H]
Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 54601; Mature: 54470
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLSSPASSGPKTSYHEFYADDFSPRDHYRLLWDHIRATGNNALETKDHESQLALQTEG CCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC VTFTVYGESEEGIERIWPFDLIPRIITAPEWSRIESGLKQRVKALNLFLEDLYGEQKIIK EEEEEECCCCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH DGVIPPELIYQGKDFRREIVGIVPPRGIYTHISGIDIIRDEQGDFLILEDNLRTPSGVSY CCCCCHHHHCCCCHHHHHHHCCCCCCCCEEECCCEEEEECCCCCEEEEECCCCCCCCCHH MIENRVIERRILPEFFNKYRVRRVEHYPSLLLDALRCLSPRGKGTAEIVLLTPGIYNSAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHH FEHTFLAKEMGIELAEGRDMVTINDIVYLKTTKGLKRVDVIYRRIDDDYLDPLIFRSDSS HHHHHHHHHHCCEEECCCCEEEEEEEEEEEECCCHHHHHHHHHHHCHHHCCCEEEECCCC LGIAGVINAWRAGNVAIVNAPGSGIADDKAVYPFVPDIIRYYLGQQPILKNVPTYQMTNA CCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEECCC TDREYVFDNMERMVVKAVSESGGYGMLMGPSSTPALRKEFMDRVLENPRNYIAQPVVYLS CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH RHICYMDGELEARHLDLRPFVIYGEDIQVVPGGLTRVALRKGSLVVNSSQGGGSKDTWVL CCEEEECCCCCEEEECCCEEEEECCCEEECCCCCEEEEEECCCEEEECCCCCCCCCCEEE AE EC >Mature Secondary Structure PPLSSPASSGPKTSYHEFYADDFSPRDHYRLLWDHIRATGNNALETKDHESQLALQTEG CCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC VTFTVYGESEEGIERIWPFDLIPRIITAPEWSRIESGLKQRVKALNLFLEDLYGEQKIIK EEEEEECCCCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH DGVIPPELIYQGKDFRREIVGIVPPRGIYTHISGIDIIRDEQGDFLILEDNLRTPSGVSY CCCCCHHHHCCCCHHHHHHHCCCCCCCCEEECCCEEEEECCCCCEEEEECCCCCCCCCHH MIENRVIERRILPEFFNKYRVRRVEHYPSLLLDALRCLSPRGKGTAEIVLLTPGIYNSAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHH FEHTFLAKEMGIELAEGRDMVTINDIVYLKTTKGLKRVDVIYRRIDDDYLDPLIFRSDSS HHHHHHHHHHCCEEECCCCEEEEEEEEEEEECCCHHHHHHHHHHHCHHHCCCEEEECCCC LGIAGVINAWRAGNVAIVNAPGSGIADDKAVYPFVPDIIRYYLGQQPILKNVPTYQMTNA CCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEECCC TDREYVFDNMERMVVKAVSESGGYGMLMGPSSTPALRKEFMDRVLENPRNYIAQPVVYLS CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH RHICYMDGELEARHLDLRPFVIYGEDIQVVPGGLTRVALRKGSLVVNSSQGGGSKDTWVL CCEEEECCCCCEEEECCCEEEEECCCEEECCCCCEEEEEECCCEEEECCCCCCCCCCEEE AE EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1368738; 8590279; 8905231 [H]