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The map label for this gene is yedY [H]

Identifier: 189423696

GI number: 189423696

Start: 628441

End: 629409

Strand: Reverse

Name: yedY [H]

Synonym: Glov_0627

Alternate gene names: 189423696

Gene position: 629409-628441 (Counterclockwise)

Preceding gene: 189423697

Following gene: 189423693

Centisome position: 16.07

GC content: 55.52

Gene sequence:

>969_bases
ATGCAGAGCTACAAGCTGCCGACATCCGAGTTGACCGCAGAAGAGGTTTTCCGTACCCGGCGTACCCTGTTGAAGGCGCT
CGGTTTTCTGGGGCTGAACGCTTGGCCTCTGCTGAACGCCTGCACCAACTACGCTGCCCAGAGCCGTGATCTGAACGGTA
CGCTGGTCAACCTGAAGCAGTTGCACGCTCCCCGCAACGGCAGCTACCGGCTGGATCGTCCGCTGACTGATCAGGCAGAG
GCTGCCGCATACACCAATTTTTATGAATTTACCCATAGCAAAGAGGTCTGGCGCCGGGTAGATCGCTTTCTGACCCGCCC
CTGGGAACTGAAGATTACCGGGCTGGTTAAAAAACCGCTGACCATTTCTGTTGACGAGCTGTTGAAATTGATCCCGCAAG
AGGAACGTCACTATCGTTTTCGCTGTGTGGAGACCTGGTCAATGGCGGTTCCCTGGATCGGATTTCCGCTGTCTGCCCTG
ATCAAGCGGGTTGAACCGCTGTCATCGGCAACGCATATCTCGTTTATTTCGTTTCTCAGGCGTGACCAGGCTCCGGAACA
GAAGCGGAGCAGTGTTGAGCTCTGGCCGTACCACGAAGGGCTTACGCTTGCCGAAGGGATGAATGACCTCAGCTTCATGG
CCACCGGCCTCTATGGGCATGAACTGGCCAAACAGCACGGCGCGCCGATCCGGCTGGTTGCTCCGTGGAAATACGGCTTC
AAAAGCATCAAGTCGGTGGTTGAAATAGTCTTTACCGACCGGCAGCCCGCTACCTTCTGGAACGCCATGATTCCGAACGA
GTACGGTTTCTGGGCCAACATCAATCCGGCGATTCCCCATCCACGCTGGAGCCAGGCCGAAGAGTCCCTGCTGGGCAGCA
ATGAACGTCGTAAAACCCTGCTCTACAACGGCTACACTGATCAGGTAGGCGGCTTATACAACCTGAAAGATCGACAGTAT
TTCTATTAA

Upstream 100 bases:

>100_bases
ACCGGGGCGCCGTCATCTGCGGCACCCCGGTATCGGCTGATCACAGGCTCCTGGACTGACTATCCGGCCCTGCAGTAATC
TGACCAAGGGGAGGGCTGTT

Downstream 100 bases:

>100_bases
AACTGTCAGTTTCTGATGGCTGCCAGCCCTCCTCCGGCCTGCCGTGCCTGCAAGTCGGCTTTCTCCATCAAGGCGCCAAG
AACCGCCTCCGGCACCCGTT

Product: sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MQSYKLPTSELTAEEVFRTRRTLLKALGFLGLNAWPLLNACTNYAAQSRDLNGTLVNLKQLHAPRNGSYRLDRPLTDQAE
AAAYTNFYEFTHSKEVWRRVDRFLTRPWELKITGLVKKPLTISVDELLKLIPQEERHYRFRCVETWSMAVPWIGFPLSAL
IKRVEPLSSATHISFISFLRRDQAPEQKRSSVELWPYHEGLTLAEGMNDLSFMATGLYGHELAKQHGAPIRLVAPWKYGF
KSIKSVVEIVFTDRQPATFWNAMIPNEYGFWANINPAIPHPRWSQAEESLLGSNERRKTLLYNGYTDQVGGLYNLKDRQY
FY

Sequences:

>Translated_322_residues
MQSYKLPTSELTAEEVFRTRRTLLKALGFLGLNAWPLLNACTNYAAQSRDLNGTLVNLKQLHAPRNGSYRLDRPLTDQAE
AAAYTNFYEFTHSKEVWRRVDRFLTRPWELKITGLVKKPLTISVDELLKLIPQEERHYRFRCVETWSMAVPWIGFPLSAL
IKRVEPLSSATHISFISFLRRDQAPEQKRSSVELWPYHEGLTLAEGMNDLSFMATGLYGHELAKQHGAPIRLVAPWKYGF
KSIKSVVEIVFTDRQPATFWNAMIPNEYGFWANINPAIPHPRWSQAEESLLGSNERRKTLLYNGYTDQVGGLYNLKDRQY
FY
>Mature_322_residues
MQSYKLPTSELTAEEVFRTRRTLLKALGFLGLNAWPLLNACTNYAAQSRDLNGTLVNLKQLHAPRNGSYRLDRPLTDQAE
AAAYTNFYEFTHSKEVWRRVDRFLTRPWELKITGLVKKPLTISVDELLKLIPQEERHYRFRCVETWSMAVPWIGFPLSAL
IKRVEPLSSATHISFISFLRRDQAPEQKRSSVELWPYHEGLTLAEGMNDLSFMATGLYGHELAKQHGAPIRLVAPWKYGF
KSIKSVVEIVFTDRQPATFWNAMIPNEYGFWANINPAIPHPRWSQAEESLLGSNERRKTLLYNGYTDQVGGLYNLKDRQY
FY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=326, Percent_Identity=43.2515337423313, Blast_Score=248, Evalue=4e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 37262; Mature: 37262

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSYKLPTSELTAEEVFRTRRTLLKALGFLGLNAWPLLNACTNYAAQSRDLNGTLVNLKQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEHHHH
LHAPRNGSYRLDRPLTDQAEAAAYTNFYEFTHSKEVWRRVDRFLTRPWELKITGLVKKPL
HCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
TISVDELLKLIPQEERHYRFRCVETWSMAVPWIGFPLSALIKRVEPLSSATHISFISFLR
EECHHHHHHHCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
RDQAPEQKRSSVELWPYHEGLTLAEGMNDLSFMATGLYGHELAKQHGAPIRLVAPWKYGF
HCCCCHHHHCCCEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH
KSIKSVVEIVFTDRQPATFWNAMIPNEYGFWANINPAIPHPRWSQAEESLLGSNERRKTL
HHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCEE
LYNGYTDQVGGLYNLKDRQYFY
EECCCCHHCCCEECCCCCCCCC
>Mature Secondary Structure
MQSYKLPTSELTAEEVFRTRRTLLKALGFLGLNAWPLLNACTNYAAQSRDLNGTLVNLKQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEHHHH
LHAPRNGSYRLDRPLTDQAEAAAYTNFYEFTHSKEVWRRVDRFLTRPWELKITGLVKKPL
HCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
TISVDELLKLIPQEERHYRFRCVETWSMAVPWIGFPLSALIKRVEPLSSATHISFISFLR
EECHHHHHHHCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
RDQAPEQKRSSVELWPYHEGLTLAEGMNDLSFMATGLYGHELAKQHGAPIRLVAPWKYGF
HCCCCHHHHCCCEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH
KSIKSVVEIVFTDRQPATFWNAMIPNEYGFWANINPAIPHPRWSQAEESLLGSNERRKTL
HHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCEE
LYNGYTDQVGGLYNLKDRQYFY
EECCCCHHCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA