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The map label for this gene is speE [H]

Identifier: 189423611

GI number: 189423611

Start: 511363

End: 513711

Strand: Reverse

Name: speE [H]

Synonym: Glov_0540

Alternate gene names: 189423611

Gene position: 513711-511363 (Counterclockwise)

Preceding gene: 189423612

Following gene: 189423610

Centisome position: 13.11

GC content: 56.62

Gene sequence:

>2349_bases
ATGACACGACAGTTCCGCTTACTCCTGCTGAGCCTCTTGTTCCTCTCCGGGTTCACCGGACTTTGCTACGAAATCTGCTG
GATCAGGGCAGCCGGCAGGATATTCGGAGCCACAGCCTTTGCCGTCAGTTCCGTGGTTGCGCTGTTCTTTGCCGGAATGG
CGCTGGGTGCGCACTATTTCGGCAACTGTGTGCAACGGTGGAAACAACCGTTACGGGTCTACGCACTGCTTGAGATCGGC
ATCGGCACCGGAGCCATGCTCAGCTTGCCCCTGCTGACCCTGCTTGAACAGCCGTACCAGCTGCTCTACCAAGCCGGTTT
TCAGAACGATAGCACCCTGGCACTGACTCGTCTGCTGCTGATCGGTCTGATCATCATTCCGCCGACCTTTCTAATGGGGG
GAACACTACCGCTCTTTACCCAGTTTTACGATACAGCAGGCAAGGAGCTGGGATTTCTCTATGCCCTGAACAGCCTCGGT
GCAGCAGCCGGTTGCCTGCTCTGCGGCTTTATCTTGCTGCCGATGCTCGGCATCAGCAGCACGCTGCTGCTGATCGGCCT
GATGGCCCAGGGGACGGGGCTGCTTCTGCTGTACCTGCTGAAATATGATCCGCATTCCGTAGCTATCCCTGCAGCAGTTA
CAGCCTTTCCTGACCGGAGCTTTAATTCAACCGGACAGGCGCTGCTGTATCCCGTTATCTTCGGCACCGGCTTCTGTGCA
CTTTCTTACGAGATCATCTGGACCCGCTTTCTGTCGCTGATCACCCACAACACGGTCTATACCTATACCATCAGTCTGCT
GGTAACCCTGCTGGGGATAAGTGCAGGCAGCATACTGGCCCGCCTGCACCGGCCCGCCCTGCGCCACCCGACTGCATTGG
CTGCGGCCTACATCCTGAACTCGCTGTTTGTTCTGCTATCGCTACTACTGCCGACAGCGGCCTGGGACTGGGCCGGATCA
AGCGAATCACCGGTGATGGTACTGCTGATCTGTCTGGCGCTGATGTTTATTCCGGCGCTCTGCTCCGGTCTCACCTTTCC
TTTGCTGTTTGATCTGATCAGGCAGGCACGTTACAGCAGCGGCAAACGTGTGGGGAGGCTGCTTGCTGTCAACACAGCGG
GCTGTGTTGCCGGTTCGCTGTTGACCGGCTTTATCCTGCTGCCGTTGCTGGGCATGCACGCCACCCTGCTGGTTACCACC
GGCCTGTGTCTGCTGTTGGGAATTCTAGTCATGCTCTTTTTTGAGCGGGGCAGACCCTGGCGGGTCAGGGGGCTGATTGC
GTGCGTCAGCCTGGCGGCGTGGCTGTGCCTGATCAGCACAACAACCGTACATCTGCCGCAGAGTTATCTGGCCAAGGGGA
AAAAGCTGGTCGATTACGTGGAGGGCAAGAACAGTTTTATCTCTGTGGTTCAAAAAAACGGCGATCTGACCATGGAGTTG
GATCGTCTGTGGCAGGGCAAGAAAGGCACCGGGCACCAGATCATGGCGGCCCACCTTCCGATGCTGCTCCACCCGGCTGC
ACAGGAGATCCTGGTGGTTGGGATCGGCGCCGGACAGGCGCCAAGCAGGTTCCTCTACTACGACATCACCCGCCTGGATT
GCGTGGATATTGAAAGCAGCCTTCCGCAGGTGCTCAAGAAGCATTTTCAGGGAAGCTGGCTCAACGATCCACGGGTCTCA
TTCATTGCCGAAGACGGTCGCACCGTGGCACGGTACGGCAAGCGGCGGTATGACCTGATCTCGGTTGAGGTGGGGCAGAT
CTTCAGGCCGCAGGCATCGGCCTTCTATACCCTTGAATTTTATCGCAACGCCAGGGAAAAACTGGCTCAGGACGGCATCA
TCGCCCAATTTCTGCCGGTCGGCTTCTTCAACCAAGACCAGCTCAAGTCGGTGATCAGAACCTTTCTGGCAGTGTTCCCC
CACAGCACCCTCTGGTACAATCAACATGCCGAACTGTTGCTGATCGGTTCCCCCGACAGAGATTTAGCGATTCGGGCGGA
AGGGGTCAGGGTATTGAAGCAGAACAGCAGGGTACGTGCCGAACTGTTCTTCGGCTACCCCGGCACCGAGGAGCATTTTT
TGAATCTGCCGGAAGTGCTGGCTGCAAGCTTCCTGATGGGGCCGAAAACTCTGGCAAATATCTCGACAGACGCCCCTCTT
CTAAGCAACGACAGGCCAGTGCTTGAATACGGAACCGCACGGACAACCTATGCGCCACAACGTTTCAAAAAACTCTTTAC
CGAGCAGTATGACTCACCACGCAGTATCATCAAGTTTACCGATCCCGAGGCAATACTGCCGAAAAGCACCAGAATCCAGG
AATACTACCTAACTAACGGGTTTAACTGA

Upstream 100 bases:

>100_bases
TCAGCGGGCCCCATGAGCATCACCACTGCCACGAACCGCTGACCCACACCCACGTGCACTGGCCGGATATTCATCACCGT
CACAGCCATTGAACCATTGC

Downstream 100 bases:

>100_bases
GAAAGTTTATCTCATGATGCAAGCGGCGATTAAAGTGCCGGTCAAGCGCTGCCTCAAAATTGCCAACAAAAGGGTAAGAC
CATTTTAACGTTTTTAATTG

Product: spermine synthase

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 782; Mature: 781

Protein sequence:

>782_residues
MTRQFRLLLLSLLFLSGFTGLCYEICWIRAAGRIFGATAFAVSSVVALFFAGMALGAHYFGNCVQRWKQPLRVYALLEIG
IGTGAMLSLPLLTLLEQPYQLLYQAGFQNDSTLALTRLLLIGLIIIPPTFLMGGTLPLFTQFYDTAGKELGFLYALNSLG
AAAGCLLCGFILLPMLGISSTLLLIGLMAQGTGLLLLYLLKYDPHSVAIPAAVTAFPDRSFNSTGQALLYPVIFGTGFCA
LSYEIIWTRFLSLITHNTVYTYTISLLVTLLGISAGSILARLHRPALRHPTALAAAYILNSLFVLLSLLLPTAAWDWAGS
SESPVMVLLICLALMFIPALCSGLTFPLLFDLIRQARYSSGKRVGRLLAVNTAGCVAGSLLTGFILLPLLGMHATLLVTT
GLCLLLGILVMLFFERGRPWRVRGLIACVSLAAWLCLISTTTVHLPQSYLAKGKKLVDYVEGKNSFISVVQKNGDLTMEL
DRLWQGKKGTGHQIMAAHLPMLLHPAAQEILVVGIGAGQAPSRFLYYDITRLDCVDIESSLPQVLKKHFQGSWLNDPRVS
FIAEDGRTVARYGKRRYDLISVEVGQIFRPQASAFYTLEFYRNAREKLAQDGIIAQFLPVGFFNQDQLKSVIRTFLAVFP
HSTLWYNQHAELLLIGSPDRDLAIRAEGVRVLKQNSRVRAELFFGYPGTEEHFLNLPEVLAASFLMGPKTLANISTDAPL
LSNDRPVLEYGTARTTYAPQRFKKLFTEQYDSPRSIIKFTDPEAILPKSTRIQEYYLTNGFN

Sequences:

>Translated_782_residues
MTRQFRLLLLSLLFLSGFTGLCYEICWIRAAGRIFGATAFAVSSVVALFFAGMALGAHYFGNCVQRWKQPLRVYALLEIG
IGTGAMLSLPLLTLLEQPYQLLYQAGFQNDSTLALTRLLLIGLIIIPPTFLMGGTLPLFTQFYDTAGKELGFLYALNSLG
AAAGCLLCGFILLPMLGISSTLLLIGLMAQGTGLLLLYLLKYDPHSVAIPAAVTAFPDRSFNSTGQALLYPVIFGTGFCA
LSYEIIWTRFLSLITHNTVYTYTISLLVTLLGISAGSILARLHRPALRHPTALAAAYILNSLFVLLSLLLPTAAWDWAGS
SESPVMVLLICLALMFIPALCSGLTFPLLFDLIRQARYSSGKRVGRLLAVNTAGCVAGSLLTGFILLPLLGMHATLLVTT
GLCLLLGILVMLFFERGRPWRVRGLIACVSLAAWLCLISTTTVHLPQSYLAKGKKLVDYVEGKNSFISVVQKNGDLTMEL
DRLWQGKKGTGHQIMAAHLPMLLHPAAQEILVVGIGAGQAPSRFLYYDITRLDCVDIESSLPQVLKKHFQGSWLNDPRVS
FIAEDGRTVARYGKRRYDLISVEVGQIFRPQASAFYTLEFYRNAREKLAQDGIIAQFLPVGFFNQDQLKSVIRTFLAVFP
HSTLWYNQHAELLLIGSPDRDLAIRAEGVRVLKQNSRVRAELFFGYPGTEEHFLNLPEVLAASFLMGPKTLANISTDAPL
LSNDRPVLEYGTARTTYAPQRFKKLFTEQYDSPRSIIKFTDPEAILPKSTRIQEYYLTNGFN
>Mature_781_residues
TRQFRLLLLSLLFLSGFTGLCYEICWIRAAGRIFGATAFAVSSVVALFFAGMALGAHYFGNCVQRWKQPLRVYALLEIGI
GTGAMLSLPLLTLLEQPYQLLYQAGFQNDSTLALTRLLLIGLIIIPPTFLMGGTLPLFTQFYDTAGKELGFLYALNSLGA
AAGCLLCGFILLPMLGISSTLLLIGLMAQGTGLLLLYLLKYDPHSVAIPAAVTAFPDRSFNSTGQALLYPVIFGTGFCAL
SYEIIWTRFLSLITHNTVYTYTISLLVTLLGISAGSILARLHRPALRHPTALAAAYILNSLFVLLSLLLPTAAWDWAGSS
ESPVMVLLICLALMFIPALCSGLTFPLLFDLIRQARYSSGKRVGRLLAVNTAGCVAGSLLTGFILLPLLGMHATLLVTTG
LCLLLGILVMLFFERGRPWRVRGLIACVSLAAWLCLISTTTVHLPQSYLAKGKKLVDYVEGKNSFISVVQKNGDLTMELD
RLWQGKKGTGHQIMAAHLPMLLHPAAQEILVVGIGAGQAPSRFLYYDITRLDCVDIESSLPQVLKKHFQGSWLNDPRVSF
IAEDGRTVARYGKRRYDLISVEVGQIFRPQASAFYTLEFYRNAREKLAQDGIIAQFLPVGFFNQDQLKSVIRTFLAVFPH
STLWYNQHAELLLIGSPDRDLAIRAEGVRVLKQNSRVRAELFFGYPGTEEHFLNLPEVLAASFLMGPKTLANISTDAPLL
SNDRPVLEYGTARTTYAPQRFKKLFTEQYDSPRSIIKFTDPEAILPKSTRIQEYYLTNGFN

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG4262

COG function: function code R; Predicted spermidine synthase with an N-terminal membrane domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 86306; Mature: 86175

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS51006 SPERMIDINE_SYNTHASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQFRLLLLSLLFLSGFTGLCYEICWIRAAGRIFGATAFAVSSVVALFFAGMALGAHYF
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNCVQRWKQPLRVYALLEIGIGTGAMLSLPLLTLLEQPYQLLYQAGFQNDSTLALTRLLL
HHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IGLIIIPPTFLMGGTLPLFTQFYDTAGKELGFLYALNSLGAAAGCLLCGFILLPMLGISS
HHHHHHCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLLIGLMAQGTGLLLLYLLKYDPHSVAIPAAVTAFPDRSFNSTGQALLYPVIFGTGFCA
HHHHHHHHHCCCHHHHHHHHHCCCCCEECCHHHEECCCCCCCCCCCHHHHHHHHHCCHHH
LSYEIIWTRFLSLITHNTVYTYTISLLVTLLGISAGSILARLHRPALRHPTALAAAYILN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHCCHHHHHHHHHHH
SLFVLLSLLLPTAAWDWAGSSESPVMVLLICLALMFIPALCSGLTFPLLFDLIRQARYSS
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
GKRVGRLLAVNTAGCVAGSLLTGFILLPLLGMHATLLVTTGLCLLLGILVMLFFERGRPW
CHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RVRGLIACVSLAAWLCLISTTTVHLPQSYLAKGKKLVDYVEGKNSFISVVQKNGDLTMEL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCHHHHHHHHCCCCEEEEH
DRLWQGKKGTGHQIMAAHLPMLLHPAAQEILVVGIGAGQAPSRFLYYDITRLDCVDIESS
HHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECEEEEECHHHH
LPQVLKKHFQGSWLNDPRVSFIAEDGRTVARYGKRRYDLISVEVGQIFRPQASAFYTLEF
HHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCHHCEEEEEEHHHHCCCCCCCEEHHHH
YRNAREKLAQDGIIAQFLPVGFFNQDQLKSVIRTFLAVFPHSTLWYNQHAELLLIGSPDR
HHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCC
DLAIRAEGVRVLKQNSRVRAELFFGYPGTEEHFLNLPEVLAASFLMGPKTLANISTDAPL
CEEEEHHHHHHHHCCCCEEEEEEECCCCCHHHHCCCHHHHHHHHHCCCHHHHCCCCCCCC
LSNDRPVLEYGTARTTYAPQRFKKLFTEQYDSPRSIIKFTDPEAILPKSTRIQEYYLTNG
CCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHCCC
FN
CC
>Mature Secondary Structure 
TRQFRLLLLSLLFLSGFTGLCYEICWIRAAGRIFGATAFAVSSVVALFFAGMALGAHYF
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNCVQRWKQPLRVYALLEIGIGTGAMLSLPLLTLLEQPYQLLYQAGFQNDSTLALTRLLL
HHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IGLIIIPPTFLMGGTLPLFTQFYDTAGKELGFLYALNSLGAAAGCLLCGFILLPMLGISS
HHHHHHCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLLIGLMAQGTGLLLLYLLKYDPHSVAIPAAVTAFPDRSFNSTGQALLYPVIFGTGFCA
HHHHHHHHHCCCHHHHHHHHHCCCCCEECCHHHEECCCCCCCCCCCHHHHHHHHHCCHHH
LSYEIIWTRFLSLITHNTVYTYTISLLVTLLGISAGSILARLHRPALRHPTALAAAYILN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHCCHHHHHHHHHHH
SLFVLLSLLLPTAAWDWAGSSESPVMVLLICLALMFIPALCSGLTFPLLFDLIRQARYSS
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
GKRVGRLLAVNTAGCVAGSLLTGFILLPLLGMHATLLVTTGLCLLLGILVMLFFERGRPW
CHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RVRGLIACVSLAAWLCLISTTTVHLPQSYLAKGKKLVDYVEGKNSFISVVQKNGDLTMEL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCHHHHHHHHCCCCEEEEH
DRLWQGKKGTGHQIMAAHLPMLLHPAAQEILVVGIGAGQAPSRFLYYDITRLDCVDIESS
HHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECEEEEECHHHH
LPQVLKKHFQGSWLNDPRVSFIAEDGRTVARYGKRRYDLISVEVGQIFRPQASAFYTLEF
HHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCHHCEEEEEEHHHHCCCCCCCEEHHHH
YRNAREKLAQDGIIAQFLPVGFFNQDQLKSVIRTFLAVFPHSTLWYNQHAELLLIGSPDR
HHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCC
DLAIRAEGVRVLKQNSRVRAELFFGYPGTEEHFLNLPEVLAASFLMGPKTLANISTDAPL
CEEEEHHHHHHHHCCCCEEEEEEECCCCCHHHHCCCHHHHHHHHHCCCHHHHCCCCCCCC
LSNDRPVLEYGTARTTYAPQRFKKLFTEQYDSPRSIIKFTDPEAILPKSTRIQEYYLTNG
CCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHCCC
FN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA