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The map label for this gene is 189423525

Identifier: 189423525

GI number: 189423525

Start: 426998

End: 427576

Strand: Reverse

Name: 189423525

Synonym: Glov_0454

Alternate gene names: NA

Gene position: 427576-426998 (Counterclockwise)

Preceding gene: 189423530

Following gene: 189423524

Centisome position: 10.91

GC content: 61.66

Gene sequence:

>579_bases
ATGGGGCGAGCAACAGTAGCCTTTTGGTCGGTAATCCTGATTCTGGCCGGTGCTTCCGCCTTTTACGGCATCAACGCCGA
AAAACAGCGGCGCAGTGTGCAGAGTGCCGGCGGCAAGATCGAGAGCGGCGATCTGGTCCGGCTGGTCAAGGTCATTGATG
GTGACAGTCTGGTCGCAGCGCGGGAAGGCCAGCCGCCGGTCACCATCAGAATTGTGGGGATCAAATCCTTTGACGCCAAG
GTGGAAAAGGATGTGGTCACCCCCTTTGCCCAGGCCGCCATGGAGACGATCCAGCGCAGCATGCTCGACCGGCCGGTGCG
GGTCCTGCTGGCCACCACCCCCAAAGACAAGTATGGCCGCTATCTGGCCACCTTGTATGTTGATGACGAGGATATCGCGA
TCCGCCTGATACGGCAGGGGCTGGCACTGGTCTACACGGTCTACCCCTTTCCTGCCATGCAGGGCTACCTGCAGGAGCAG
GAACAGGCCCGGGCCGGGCGGCGCGGACTCTGGTCAAACGCAACAGCCACTGAGCGGGCGCTGGCACTGATCCGTGAGTG
GCGCAACCAAAACCAGTAG

Upstream 100 bases:

>100_bases
CCCGGCCCCTCTGTACAATCGGACATTTGTTGGTATACATGATGATGCAGACGTTATCAGAACTCTGTTATAGCACATCT
TTATAGGGAGGCAAATGCGC

Downstream 100 bases:

>100_bases
GAGTTGCCCCATGTATCAGGTTCTTCACTATTTCATGAAAACCATGCTGCGCAATCCGCCTGAATACCTGCGGGTGCTGG
TGTTGATGCTGGCGGTGCTG

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MGRATVAFWSVILILAGASAFYGINAEKQRRSVQSAGGKIESGDLVRLVKVIDGDSLVAAREGQPPVTIRIVGIKSFDAK
VEKDVVTPFAQAAMETIQRSMLDRPVRVLLATTPKDKYGRYLATLYVDDEDIAIRLIRQGLALVYTVYPFPAMQGYLQEQ
EQARAGRRGLWSNATATERALALIREWRNQNQ

Sequences:

>Translated_192_residues
MGRATVAFWSVILILAGASAFYGINAEKQRRSVQSAGGKIESGDLVRLVKVIDGDSLVAAREGQPPVTIRIVGIKSFDAK
VEKDVVTPFAQAAMETIQRSMLDRPVRVLLATTPKDKYGRYLATLYVDDEDIAIRLIRQGLALVYTVYPFPAMQGYLQEQ
EQARAGRRGLWSNATATERALALIREWRNQNQ
>Mature_191_residues
GRATVAFWSVILILAGASAFYGINAEKQRRSVQSAGGKIESGDLVRLVKVIDGDSLVAAREGQPPVTIRIVGIKSFDAKV
EKDVVTPFAQAAMETIQRSMLDRPVRVLLATTPKDKYGRYLATLYVDDEDIAIRLIRQGLALVYTVYPFPAMQGYLQEQE
QARAGRRGLWSNATATERALALIREWRNQNQ

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 21312; Mature: 21181

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRATVAFWSVILILAGASAFYGINAEKQRRSVQSAGGKIESGDLVRLVKVIDGDSLVAA
CCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEE
REGQPPVTIRIVGIKSFDAKVEKDVVTPFAQAAMETIQRSMLDRPVRVLLATTPKDKYGR
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHCC
YLATLYVDDEDIAIRLIRQGLALVYTVYPFPAMQGYLQEQEQARAGRRGLWSNATATERA
EEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LALIREWRNQNQ
HHHHHHHHCCCC
>Mature Secondary Structure 
GRATVAFWSVILILAGASAFYGINAEKQRRSVQSAGGKIESGDLVRLVKVIDGDSLVAA
CCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEE
REGQPPVTIRIVGIKSFDAKVEKDVVTPFAQAAMETIQRSMLDRPVRVLLATTPKDKYGR
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHCC
YLATLYVDDEDIAIRLIRQGLALVYTVYPFPAMQGYLQEQEQARAGRRGLWSNATATERA
EEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LALIREWRNQNQ
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]