| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is 189423507
Identifier: 189423507
GI number: 189423507
Start: 410706
End: 411434
Strand: Reverse
Name: 189423507
Synonym: Glov_0436
Alternate gene names: NA
Gene position: 411434-410706 (Counterclockwise)
Preceding gene: 189423508
Following gene: 189423506
Centisome position: 10.5
GC content: 43.21
Gene sequence:
>729_bases ATGCAGGCAAGACCATATCTGAAAGCAATCTCGCTGAAGGAAGATATGATTACGGATTGGGATAAGTATCCATTCAACAT TCCTGCAATTCGGAATATCAATACACTTCAATTCCATTCCGGTGTGACATTCTTCGTCGGCGAAAATGGTGCTGGAAAAT CTACACTTATCGAATCAATAGCTCTGGCGATGGGATTCAGTTCTGAGGGTGGAACACGGAATTTCAACCTCGCAACAGCG GACACAATATCAACACTTCACCGGTATTTAAAAACTATTCGGAGTTTTGCAACACCAAAGGACTATTACTTTCTTCGTGC TGAAAGTTTTTATAACGTTGCAACATATATGGATCAGGTTGGTGGCATTACTTCCGGTTATGGGGACAAATTGCTCCATG AACGTTCACACGGCGAGGCTTTTATGGCCGCGCTCACGCTGAAGCTCAGAGGGAAAGGCCTTTATATTTTTGACGAGCCA GAGGCCGCACTATCGCCAACGCGACAAATGGCGGCAATCTCGGCAATTCATCAATTAGTCAAAAAAGAATCGCAATTCAT AATTGCAACCCATTCACCTATTCTACTGTCTTACCCCGATGCAAAGATTCTACATTTGGACGAGCATGGAATATCTGAGA TTTCTTACGAGGAGACGGAACATTTTTCAATAACAAGAAGTTTCTTGAACAACTACAAGAAGCTCCTCCCTACTCTCCTG GAAGACTGA
Upstream 100 bases:
>100_bases TATCAGAGGAGGCTTTCCGAATGTTCGAAGGCCACAAGTTCAAACTGAAGAAGACGAAGATCCAACCGCACCGTTAAAGC CAAAACGTAGAGAGACGCCA
Downstream 100 bases:
>100_bases TAAAACCTCGGCCAGCAGGCAACCATGAAACGATCCGGCATAAAAATTCTTGGCACGTTGGCAGTTATTGCGGTGATTCT TATCAGCTGCGGTTTGCTCG
Product: SMC domain-containing protein
Products: NA
Alternate protein names: SMC Domain-Containing Protein; ABC Transporter; SMC Domain Protein; ATPase; Aaa ATPase; RecF/RecN/SMC; SMC Protein-Like Protein; ABC Transport System ATPase Component; ABC-Type Antimicrobial Peptide Transport System Protein; LOW QUALITY PROTEIN ABC Transporter
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MQARPYLKAISLKEDMITDWDKYPFNIPAIRNINTLQFHSGVTFFVGENGAGKSTLIESIALAMGFSSEGGTRNFNLATA DTISTLHRYLKTIRSFATPKDYYFLRAESFYNVATYMDQVGGITSGYGDKLLHERSHGEAFMAALTLKLRGKGLYIFDEP EAALSPTRQMAAISAIHQLVKKESQFIIATHSPILLSYPDAKILHLDEHGISEISYEETEHFSITRSFLNNYKKLLPTLL ED
Sequences:
>Translated_242_residues MQARPYLKAISLKEDMITDWDKYPFNIPAIRNINTLQFHSGVTFFVGENGAGKSTLIESIALAMGFSSEGGTRNFNLATA DTISTLHRYLKTIRSFATPKDYYFLRAESFYNVATYMDQVGGITSGYGDKLLHERSHGEAFMAALTLKLRGKGLYIFDEP EAALSPTRQMAAISAIHQLVKKESQFIIATHSPILLSYPDAKILHLDEHGISEISYEETEHFSITRSFLNNYKKLLPTLL ED >Mature_242_residues MQARPYLKAISLKEDMITDWDKYPFNIPAIRNINTLQFHSGVTFFVGENGAGKSTLIESIALAMGFSSEGGTRNFNLATA DTISTLHRYLKTIRSFATPKDYYFLRAESFYNVATYMDQVGGITSGYGDKLLHERSHGEAFMAALTLKLRGKGLYIFDEP EAALSPTRQMAAISAIHQLVKKESQFIIATHSPILLSYPDAKILHLDEHGISEISYEETEHFSITRSFLNNYKKLLPTLL ED
Specific function: Unknown
COG id: COG3910
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27213; Mature: 27213
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQARPYLKAISLKEDMITDWDKYPFNIPAIRNINTLQFHSGVTFFVGENGAGKSTLIESI CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHH ALAMGFSSEGGTRNFNLATADTISTLHRYLKTIRSFATPKDYYFLRAESFYNVATYMDQV HHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH GGITSGYGDKLLHERSHGEAFMAALTLKLRGKGLYIFDEPEAALSPTRQMAAISAIHQLV CCCCCCCCHHHHHHCCCCHHEEHHEEEEECCCEEEEEECCHHHHCHHHHHHHHHHHHHHH KKESQFIIATHSPILLSYPDAKILHLDEHGISEISYEETEHFSITRSFLNNYKKLLPTLL HCCCCEEEEECCCEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ED CC >Mature Secondary Structure MQARPYLKAISLKEDMITDWDKYPFNIPAIRNINTLQFHSGVTFFVGENGAGKSTLIESI CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHH ALAMGFSSEGGTRNFNLATADTISTLHRYLKTIRSFATPKDYYFLRAESFYNVATYMDQV HHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH GGITSGYGDKLLHERSHGEAFMAALTLKLRGKGLYIFDEPEAALSPTRQMAAISAIHQLV CCCCCCCCHHHHHHCCCCHHEEHHEEEEECCCEEEEEECCHHHHCHHHHHHHHHHHHHHH KKESQFIIATHSPILLSYPDAKILHLDEHGISEISYEETEHFSITRSFLNNYKKLLPTLL HCCCCEEEEECCCEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ED CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA