Click here to switch to the map view.

The map label for this gene is 189353993

Identifier: 189353993

GI number: 189353993

Start: 2319215

End: 2319508

Strand: Reverse

Name: 189353993

Synonym: BMULJ_05246

Alternate gene names: NA

Gene position: 2319508-2319215 (Counterclockwise)

Preceding gene: 189353994

Following gene: 189353992

Centisome position: 93.79

GC content: 61.56

Gene sequence:

>294_bases
ATGGCGACCTACCGGCAACTATCCGTGCAACTCGAAAGGCTTCAGCAAAAAATCGACAAGGAACGCGAGAAGGCGATTGC
CGACGCGATAGCCGAGATCAAGGCGAAAATCGACGAATTCGACATTACGCCGGAAGAGCTCGGTTTCCGTCCGCTCGGCG
CGCCGAGCGCAAAGCCGAAGCGCACGTTGCCGCCGAAATATCGCAACCCGAAGACGGGCGAAACCTGGAGTGGCCGCGGG
CGCGCGCCCGCGTGGCTCGGCAAGAACCGCACGCGATTCCTGATCGCCGACTGA

Upstream 100 bases:

>100_bases
TCCCGCAATGGGCGGCTGAAAATACTTTCGGGTAACGCGCTTTTCTATTTGCTTGGTGTCGGCTATTTTTCATGAATAAC
CCTCAAGGAATCCCATCGAT

Downstream 100 bases:

>100_bases
CTCCCGAAAATCCTCACCTTTGGCGTACCGACCGACGGTGCGACCGGCCTTGCGGCCGTCGCACCGTTCTGTTTTTCCGC
GCATGCAAAATGCATCGCGC

Product: putative histone-like nucleoid-structuring protein H-NS

Products: NA

Alternate protein names: Histone-Like Nucleoid-Structuring Protein H-NS; Hns-Like Protein; H-NS Histone-Like Protein; H-NS-Like Protein; H-NS-Like Proteins; H-NS-Like Transcription Regulator; H-NS Histone Family Protein

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MATYRQLSVQLERLQQKIDKEREKAIADAIAEIKAKIDEFDITPEELGFRPLGAPSAKPKRTLPPKYRNPKTGETWSGRG
RAPAWLGKNRTRFLIAD

Sequences:

>Translated_97_residues
MATYRQLSVQLERLQQKIDKEREKAIADAIAEIKAKIDEFDITPEELGFRPLGAPSAKPKRTLPPKYRNPKTGETWSGRG
RAPAWLGKNRTRFLIAD
>Mature_96_residues
ATYRQLSVQLERLQQKIDKEREKAIADAIAEIKAKIDEFDITPEELGFRPLGAPSAKPKRTLPPKYRNPKTGETWSGRGR
APAWLGKNRTRFLIAD

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11048; Mature: 10917

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYRQLSVQLERLQQKIDKEREKAIADAIAEIKAKIDEFDITPEELGFRPLGAPSAKPK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCC
RTLPPKYRNPKTGETWSGRGRAPAWLGKNRTRFLIAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
ATYRQLSVQLERLQQKIDKEREKAIADAIAEIKAKIDEFDITPEELGFRPLGAPSAKPK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCC
RTLPPKYRNPKTGETWSGRGRAPAWLGKNRTRFLIAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA