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The map label for this gene is ydeR [H]

Identifier: 189353956

GI number: 189353956

Start: 2272005

End: 2273240

Strand: Direct

Name: ydeR [H]

Synonym: BMULJ_05209

Alternate gene names: 189353956

Gene position: 2272005-2273240 (Clockwise)

Preceding gene: 189353954

Following gene: 189353957

Centisome position: 91.87

GC content: 74.11

Gene sequence:

>1236_bases
ATGTCTACTCCGCACCGTCTCGATGCCGCGCCGCACGCGCGGCCTGCCGCCCCGTCCCACGCCGCGGCTTCGTCGCTGCC
CGGCCGCCGTCTGGTCCTGCTGCTCGCCGCGGCGGCCGGCCTCGGCGTCGCGCCGCTCTATTACGCGCAGCCGATGCTCG
GCGCGCTCGGCCCCGATCTCGGCGCGTCGGCGCGCGCGATCGGCTTCGTGCCGACGCTCACGCAGCTCGGCTACGCGCTC
GGGATCCTGCTGCTCGCGCCGCTCGGCGACCGCTTCGACCGGCGCCGCGTGATCGTCACGAAGGCCGGCGCACTGGTCGT
CGCGCTGCTGCTCGCGGCCGTCGCGCCTTCGCTCGGGCTGCTGCTCGCGGCGAGTTTCGCGATCGGCCTCGCCGCGACGA
TGGCGCAGGACGTCGTGCCGGCCGCCGCGACGCTCGCGCACGACCAGCACCGCGGCCGCATCGTCGGCACGGTGATGACG
GGGCTGCTGCTCGGCATCCTGCTGTCGCGCGTGGTGGCCGGATTCATCGCCGAAACCGCCGGCTGGCGCGCGATGTTCGC
GCTCGCCGCCGCGAGCGTCGCCGCGATCGGCATCGTCGCCGCGCGCGGGCTGCCGCGCTTCGCGCCCACCACGCAGTTGC
CGTATCGCGCGCTGATCGGCTCGCTGCGCGCGCTCTGGCAGCGTCATCCGGCGCTGCGCCGTGCGGCGCTCGCGCAAGGC
CTGCTGGCGATCGGCTTCAGTGCATTCTGGTCGACGCTCGCGGTGATGCTGCACGGTGCGCCGTTTCATCTCGGCAGCGC
GGCAGCCGGCGCGTTCGGCCTTGCCGGCGCGGCCGGCGCGCTGGCCGCGCCGATCGCGGGACGGCTGGCCGACCGTCACG
GGCCCGAGCACGTGACGCGCATCGGGATCGGAATCGCGACGCTGTCGTTCGCCGCGATGGCCGCCGCACCCGCGATGCCG
GCGCACGCGCAGCTCGCGCTGCTCGCGGCCGCGACGATCGGCTTCGATCTCGGCGTGCAGGCGACGCTGATCGCGCATCA
GGCGATCGTGTACCGGATCGATCCGGCGTCGCGCAGCCGCCTGAACGCCGTGCTATTCGTCGGCATGTTCATCGGCATGG
CGGCCGGCGCGGCGCTCGGCAGTCTGTTGCTCGCGCAACTGGGCTGGAACGCGGTGATCGCGCTGGCCGTCGTGACGTCG
CTTGCCGCACTCGCGGTTCGCATGTGGCGACAATAA

Upstream 100 bases:

>100_bases
GTGAAACGTATAACAAGTCTGCGCGGCGCGCTACTACCGTCGCGCGTGCCGCGCGGTCACACTCGCGTCCATCGTGTTTC
CACCACTGAGGACGCCCATC

Downstream 100 bases:

>100_bases
GCGCGCTTCGCAGCGCGCCGCGCGGGCCGGCACACGCTGCCGGCGCGCGCGGCGCCGTGTTTTTCGACGCATCGGATTCC
TGCCGATTTTTTTTCGCCGA

Product: permease of the major facilitator superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSTPHRLDAAPHARPAAPSHAAASSLPGRRLVLLLAAAAGLGVAPLYYAQPMLGALGPDLGASARAIGFVPTLTQLGYAL
GILLLAPLGDRFDRRRVIVTKAGALVVALLLAAVAPSLGLLLAASFAIGLAATMAQDVVPAAATLAHDQHRGRIVGTVMT
GLLLGILLSRVVAGFIAETAGWRAMFALAAASVAAIGIVAARGLPRFAPTTQLPYRALIGSLRALWQRHPALRRAALAQG
LLAIGFSAFWSTLAVMLHGAPFHLGSAAAGAFGLAGAAGALAAPIAGRLADRHGPEHVTRIGIGIATLSFAAMAAAPAMP
AHAQLALLAAATIGFDLGVQATLIAHQAIVYRIDPASRSRLNAVLFVGMFIGMAAGAALGSLLLAQLGWNAVIALAVVTS
LAALAVRMWRQ

Sequences:

>Translated_411_residues
MSTPHRLDAAPHARPAAPSHAAASSLPGRRLVLLLAAAAGLGVAPLYYAQPMLGALGPDLGASARAIGFVPTLTQLGYAL
GILLLAPLGDRFDRRRVIVTKAGALVVALLLAAVAPSLGLLLAASFAIGLAATMAQDVVPAAATLAHDQHRGRIVGTVMT
GLLLGILLSRVVAGFIAETAGWRAMFALAAASVAAIGIVAARGLPRFAPTTQLPYRALIGSLRALWQRHPALRRAALAQG
LLAIGFSAFWSTLAVMLHGAPFHLGSAAAGAFGLAGAAGALAAPIAGRLADRHGPEHVTRIGIGIATLSFAAMAAAPAMP
AHAQLALLAAATIGFDLGVQATLIAHQAIVYRIDPASRSRLNAVLFVGMFIGMAAGAALGSLLLAQLGWNAVIALAVVTS
LAALAVRMWRQ
>Mature_410_residues
STPHRLDAAPHARPAAPSHAAASSLPGRRLVLLLAAAAGLGVAPLYYAQPMLGALGPDLGASARAIGFVPTLTQLGYALG
ILLLAPLGDRFDRRRVIVTKAGALVVALLLAAVAPSLGLLLAASFAIGLAATMAQDVVPAAATLAHDQHRGRIVGTVMTG
LLLGILLSRVVAGFIAETAGWRAMFALAAASVAAIGIVAARGLPRFAPTTQLPYRALIGSLRALWQRHPALRRAALAQGL
LAIGFSAFWSTLAVMLHGAPFHLGSAAAGAFGLAGAAGALAAPIAGRLADRHGPEHVTRIGIGIATLSFAAMAAAPAMPA
HAQLALLAAATIGFDLGVQATLIAHQAIVYRIDPASRSRLNAVLFVGMFIGMAAGAALGSLLLAQLGWNAVIALAVVTSL
AALAVRMWRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=429, Percent_Identity=23.7762237762238, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41655; Mature: 41524

Theoretical pI: Translated: 12.31; Mature: 12.31

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPHRLDAAPHARPAAPSHAAASSLPGRRLVLLLAAAAGLGVAPLYYAQPMLGALGPDL
CCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
GASARAIGFVPTLTQLGYALGILLLAPLGDRFDRRRVIVTKAGALVVALLLAAVAPSLGL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH
LLAASFAIGLAATMAQDVVPAAATLAHDQHRGRIVGTVMTGLLLGILLSRVVAGFIAETA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GWRAMFALAAASVAAIGIVAARGLPRFAPTTQLPYRALIGSLRALWQRHPALRRAALAQG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH
LLAIGFSAFWSTLAVMLHGAPFHLGSAAAGAFGLAGAAGALAAPIAGRLADRHGPEHVTR
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IGIGIATLSFAAMAAAPAMPAHAQLALLAAATIGFDLGVQATLIAHQAIVYRIDPASRSR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCHHH
LNAVLFVGMFIGMAAGAALGSLLLAQLGWNAVIALAVVTSLAALAVRMWRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STPHRLDAAPHARPAAPSHAAASSLPGRRLVLLLAAAAGLGVAPLYYAQPMLGALGPDL
CCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
GASARAIGFVPTLTQLGYALGILLLAPLGDRFDRRRVIVTKAGALVVALLLAAVAPSLGL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH
LLAASFAIGLAATMAQDVVPAAATLAHDQHRGRIVGTVMTGLLLGILLSRVVAGFIAETA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GWRAMFALAAASVAAIGIVAARGLPRFAPTTQLPYRALIGSLRALWQRHPALRRAALAQG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH
LLAIGFSAFWSTLAVMLHGAPFHLGSAAAGAFGLAGAAGALAAPIAGRLADRHGPEHVTR
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IGIGIATLSFAAMAAAPAMPAHAQLALLAAATIGFDLGVQATLIAHQAIVYRIDPASRSR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCHHH
LNAVLFVGMFIGMAAGAALGSLLLAQLGWNAVIALAVVTSLAALAVRMWRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]