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The map label for this gene is 189353931

Identifier: 189353931

GI number: 189353931

Start: 2247370

End: 2248530

Strand: Direct

Name: 189353931

Synonym: BMULJ_05184

Alternate gene names: NA

Gene position: 2247370-2248530 (Clockwise)

Preceding gene: 189353929

Following gene: 189353932

Centisome position: 90.87

GC content: 64.94

Gene sequence:

>1161_bases
TTGAACAAGAAACTGTTGACCACCGCCATCCTGGCAGCCACCGCCGGTGTGGCGCACGCGCAAAGCAGCGTCACGCTGTA
CGGCGTGATCGACGCCGGTATCAGCTACGTGAACCACAGCAAGAACGCTACCGGCGGTAGCAGCAAGCTGTTCAAGTACG
ACGACGGCGTTGCGCAAGGCAGCCGTTGGGGCCTGCGCGGCACCGAAGACCTCGGCGGCGGCCTGAAGGCGATCTTCGTG
CTCGAAAACGGCTTCAACAGCGGCAACGGCACGCTCGGCCAAGGCGGCGCGATCTTCGGCCGTCAAGCGTACGTCGGTCT
GAGCCAGACCCAGTACGGCACGCTGACGTTCGGCCGTCAGTACTCGTTCTCGACCGACGTGCTCGGTTCGAACTACTCGA
CGGGCGGCAACACGGTCGCGGGCAACTATGCGTACCACGTGAACGACGTCGACCAGCTGACGTCGAGCCGCATCAACAAC
GCGGTGAAGTTCCAGAGCGCGAACTACGCGGGCTTCACGTTCGGCGCGTTGTACGGCTTCTCGAACTCGACCGACTTCGC
GGGCGCACCGGCGACGACGACCGGCACCACGACGACGGCAGGCTCGTCGCGCGCGTACAGCTTCGGCCTGAACTACGCGA
ACGGTCCGTTCGCCCTCGGCGCCGCATACACGGACATCCGCTTCCCGAGCCAGGCGACGCCGGCGTTCTCGACGACGATC
GCGAACATCTCGACGGGCAACATCCGCGACCTGCGCACGTACGGCGTCGGCGGCCGCTACATCTTCGGCCCGGCGACCGC
CTGGCTGCTGTGGACGCGCACGCAGTTCACGCCGCTCGCGAACGGCGCATCGGGCACGTTCTACAACGCATACGAAGGCG
GCCTGAAGTACGCGATCACGCCGGCCCTGTCGGCAGCGGCGGGCTACACGTACACGAACGCGACGCAAAACGGCGCATCG
GCGCACTGGAACCAGGGCAACCTCGCGCTCGACTACGCACTCAGCAAGCGTACGGACGTGTACGGTCTCGTGATCTACCA
GAAGGCGTCGGGCAACAACGTGCAGGCGCAGATCGGTTCGAGCACGAGCTACTTCAACACGTCGGGCAACGGTTCGTCGA
ACCAGATCGCCGCACGCGTCGGTATCCGTCACAAGTTCTAA

Upstream 100 bases:

>100_bases
TTACGTGGCACGTCGATAAAGTCGCCGTCGGTCCGTGAAAGCGCCCGCAGAGAGCGCCGGAACCGCAACTGGACACGCAT
TTATTCGCTCGGAGAATCCT

Downstream 100 bases:

>100_bases
AGCATCCGCTCAACCTGCGGATCACGACGGCAGAAGCGCCCCGCTCCACGCGGGGCGCTTTTTTATGGGCTTTTAAGTTT
CGCTTAATTCTGGGCTGCGA

Product: outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MNKKLLTTAILAATAGVAHAQSSVTLYGVIDAGISYVNHSKNATGGSSKLFKYDDGVAQGSRWGLRGTEDLGGGLKAIFV
LENGFNSGNGTLGQGGAIFGRQAYVGLSQTQYGTLTFGRQYSFSTDVLGSNYSTGGNTVAGNYAYHVNDVDQLTSSRINN
AVKFQSANYAGFTFGALYGFSNSTDFAGAPATTTGTTTTAGSSRAYSFGLNYANGPFALGAAYTDIRFPSQATPAFSTTI
ANISTGNIRDLRTYGVGGRYIFGPATAWLLWTRTQFTPLANGASGTFYNAYEGGLKYAITPALSAAAGYTYTNATQNGAS
AHWNQGNLALDYALSKRTDVYGLVIYQKASGNNVQAQIGSSTSYFNTSGNGSSNQIAARVGIRHKF

Sequences:

>Translated_386_residues
MNKKLLTTAILAATAGVAHAQSSVTLYGVIDAGISYVNHSKNATGGSSKLFKYDDGVAQGSRWGLRGTEDLGGGLKAIFV
LENGFNSGNGTLGQGGAIFGRQAYVGLSQTQYGTLTFGRQYSFSTDVLGSNYSTGGNTVAGNYAYHVNDVDQLTSSRINN
AVKFQSANYAGFTFGALYGFSNSTDFAGAPATTTGTTTTAGSSRAYSFGLNYANGPFALGAAYTDIRFPSQATPAFSTTI
ANISTGNIRDLRTYGVGGRYIFGPATAWLLWTRTQFTPLANGASGTFYNAYEGGLKYAITPALSAAAGYTYTNATQNGAS
AHWNQGNLALDYALSKRTDVYGLVIYQKASGNNVQAQIGSSTSYFNTSGNGSSNQIAARVGIRHKF
>Mature_386_residues
MNKKLLTTAILAATAGVAHAQSSVTLYGVIDAGISYVNHSKNATGGSSKLFKYDDGVAQGSRWGLRGTEDLGGGLKAIFV
LENGFNSGNGTLGQGGAIFGRQAYVGLSQTQYGTLTFGRQYSFSTDVLGSNYSTGGNTVAGNYAYHVNDVDQLTSSRINN
AVKFQSANYAGFTFGALYGFSNSTDFAGAPATTTGTTTTAGSSRAYSFGLNYANGPFALGAAYTDIRFPSQATPAFSTTI
ANISTGNIRDLRTYGVGGRYIFGPATAWLLWTRTQFTPLANGASGTFYNAYEGGLKYAITPALSAAAGYTYTNATQNGAS
AHWNQGNLALDYALSKRTDVYGLVIYQKASGNNVQAQIGSSTSYFNTSGNGSSNQIAARVGIRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40386; Mature: 40386

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLLTTAILAATAGVAHAQSSVTLYGVIDAGISYVNHSKNATGGSSKLFKYDDGVAQG
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCHHHHCCCCCCCCCCCEEEEECCCCCCC
SRWGLRGTEDLGGGLKAIFVLENGFNSGNGTLGQGGAIFGRQAYVGLSQTQYGTLTFGRQ
CCCCCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCEEECCEEEEECCCCCCEEEEECCC
YSFSTDVLGSNYSTGGNTVAGNYAYHVNDVDQLTSSRINNAVKFQSANYAGFTFGALYGF
CCCCCCCCCCCCCCCCCEEECCEEEEECCHHHHHHHHHCCEEEEECCCCCCEEEEEEECC
SNSTDFAGAPATTTGTTTTAGSSRAYSFGLNYANGPFALGAAYTDIRFPSQATPAFSTTI
CCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCEEECEEEEEEECCCCCCCCCEEEE
ANISTGNIRDLRTYGVGGRYIFGPATAWLLWTRTQFTPLANGASGTFYNAYEGGLKYAIT
EECCCCCCEEEEEECCCCEEEECCCEEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEEC
PALSAAAGYTYTNATQNGASAHWNQGNLALDYALSKRTDVYGLVIYQKASGNNVQAQIGS
CHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEECC
STSYFNTSGNGSSNQIAARVGIRHKF
CCEEEECCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MNKKLLTTAILAATAGVAHAQSSVTLYGVIDAGISYVNHSKNATGGSSKLFKYDDGVAQG
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCHHHHCCCCCCCCCCCEEEEECCCCCCC
SRWGLRGTEDLGGGLKAIFVLENGFNSGNGTLGQGGAIFGRQAYVGLSQTQYGTLTFGRQ
CCCCCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCEEECCEEEEECCCCCCEEEEECCC
YSFSTDVLGSNYSTGGNTVAGNYAYHVNDVDQLTSSRINNAVKFQSANYAGFTFGALYGF
CCCCCCCCCCCCCCCCCEEECCEEEEECCHHHHHHHHHCCEEEEECCCCCCEEEEEEECC
SNSTDFAGAPATTTGTTTTAGSSRAYSFGLNYANGPFALGAAYTDIRFPSQATPAFSTTI
CCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCEEECEEEEEEECCCCCCCCCEEEE
ANISTGNIRDLRTYGVGGRYIFGPATAWLLWTRTQFTPLANGASGTFYNAYEGGLKYAIT
EECCCCCCEEEEEECCCCEEEECCCEEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEEC
PALSAAAGYTYTNATQNGASAHWNQGNLALDYALSKRTDVYGLVIYQKASGNNVQAQIGS
CHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEECC
STSYFNTSGNGSSNQIAARVGIRHKF
CCEEEECCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]