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The map label for this gene is glxA [H]

Identifier: 189353727

GI number: 189353727

Start: 1995660

End: 1996685

Strand: Direct

Name: glxA [H]

Synonym: BMULJ_04972

Alternate gene names: 189353727

Gene position: 1995660-1996685 (Clockwise)

Preceding gene: 189353714

Following gene: 189353729

Centisome position: 80.69

GC content: 66.86

Gene sequence:

>1026_bases
ATGTCGCCCGACCGTACAGCGTCGCTGTCCCACTTCGCGTTCATGCCTTTACCGAACTTCACGATGATCGCGTTCACGAA
TGCGATCGAGGTGCTTCGGATGGCGAACTACCTGAGCGGTCAGCCTCTGTACCGATGGTCGGTGATCAGTCCCGACGGCG
GCCCCGTCACGGCGAGCAACGGCCTGACGGTCGACACCGGTCCGGCCGAATGCGCGGGCCAGCCCGACATCGTGTTCGTA
TGCGGCGGCGTCGACGTGCAACGCGCGACGACGCCCGCGCATCTGTCGGCGCTGCGCCGTTTCGCACGCGCCGGCATTCC
GCTCGGCAGCCTGTGCACGGGCACCTATGCGCTCGCGAAGTCGGGCCTGCTCGCCGGCTACGCGTGCGCGATTCACTGGG
AAAACATGTCGGCGCTGAAGGAAGAGTTTCCGGACACGCGCTTCCTGAAGGAACTGTTCGTCATCGATCGCGACCGCATC
ACCTGCACGGGCGGCGTCGCGCCGCTCGACATGATGCTGAACCTGATTGCCGCGCGCGTCGGCACCGCGCGCGTCACGCA
GATCGCCGAGCAGTTCATCGTCGAACACGTGCGCGACACGAGCGCACAGCAGCGGATGCCGCTCGTCGCGCGCCTCGGCT
CGGCGAACAAGTCGCTGTTCGAAGTGATCTCGCTGATGGAAAACAATATCGAGGAACCGCTGTCGCGCGAGGAGCTCGCG
CGGCTCGCGAACATGTCGCAGCGGCAACTGCAGCGGCTGTTCCGCGAGCACCTCGGCATGACGCCGACGCACTACTACCT
GACGCTGCGGCTGCGCCGCGCGCGTGAGCTGCTGTTGCAGACCGACATGTCGATCATGCACATCACGATGGCCTGCGGCT
TCCAGTCCGCGTGCCACTTCAGCAAGAGCTATCGCGATGCGTTCGGCGTCGCCCCGACGCGCGAGCGCCGCAAGCAGGTC
GCGCCGCTCGCGCAGGGCACCCCTCCCGGCGGCCCGGCGCTGCCGACGCTGGCGATTCACGCGTGA

Upstream 100 bases:

>100_bases
GGTTTAGCCGTATGGCACGCTTGTTGCGCTCGCTCACACAATACTGCAGCCCGATTCGTGCCTCGGGCAGAAGCTATTAG
AGATTCAAGGAACGCTCCCC

Downstream 100 bases:

>100_bases
CGTAACCGCGCATCGCGACGTAGAAAAAGCGACCGAGGTCGCTTTTTTCATCGGCTGCCGGCGCGCCGCGCCGGCACTGC
ACGGGTCACGATCCCCACAC

Product: AraC subfamily transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSPDRTASLSHFAFMPLPNFTMIAFTNAIEVLRMANYLSGQPLYRWSVISPDGGPVTASNGLTVDTGPAECAGQPDIVFV
CGGVDVQRATTPAHLSALRRFARAGIPLGSLCTGTYALAKSGLLAGYACAIHWENMSALKEEFPDTRFLKELFVIDRDRI
TCTGGVAPLDMMLNLIAARVGTARVTQIAEQFIVEHVRDTSAQQRMPLVARLGSANKSLFEVISLMENNIEEPLSREELA
RLANMSQRQLQRLFREHLGMTPTHYYLTLRLRRARELLLQTDMSIMHITMACGFQSACHFSKSYRDAFGVAPTRERRKQV
APLAQGTPPGGPALPTLAIHA

Sequences:

>Translated_341_residues
MSPDRTASLSHFAFMPLPNFTMIAFTNAIEVLRMANYLSGQPLYRWSVISPDGGPVTASNGLTVDTGPAECAGQPDIVFV
CGGVDVQRATTPAHLSALRRFARAGIPLGSLCTGTYALAKSGLLAGYACAIHWENMSALKEEFPDTRFLKELFVIDRDRI
TCTGGVAPLDMMLNLIAARVGTARVTQIAEQFIVEHVRDTSAQQRMPLVARLGSANKSLFEVISLMENNIEEPLSREELA
RLANMSQRQLQRLFREHLGMTPTHYYLTLRLRRARELLLQTDMSIMHITMACGFQSACHFSKSYRDAFGVAPTRERRKQV
APLAQGTPPGGPALPTLAIHA
>Mature_340_residues
SPDRTASLSHFAFMPLPNFTMIAFTNAIEVLRMANYLSGQPLYRWSVISPDGGPVTASNGLTVDTGPAECAGQPDIVFVC
GGVDVQRATTPAHLSALRRFARAGIPLGSLCTGTYALAKSGLLAGYACAIHWENMSALKEEFPDTRFLKELFVIDRDRIT
CTGGVAPLDMMLNLIAARVGTARVTQIAEQFIVEHVRDTSAQQRMPLVARLGSANKSLFEVISLMENNIEEPLSREELAR
LANMSQRQLQRLFREHLGMTPTHYYLTLRLRRARELLLQTDMSIMHITMACGFQSACHFSKSYRDAFGVAPTRERRKQVA
PLAQGTPPGGPALPTLAIHA

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37461; Mature: 37330

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPDRTASLSHFAFMPLPNFTMIAFTNAIEVLRMANYLSGQPLYRWSVISPDGGPVTASN
CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCC
GLTVDTGPAECAGQPDIVFVCGGVDVQRATTPAHLSALRRFARAGIPLGSLCTGTYALAK
CEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SGLLAGYACAIHWENMSALKEEFPDTRFLKELFVIDRDRITCTGGVAPLDMMLNLIAARV
CCCCEEEEEEEEECHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHH
GTARVTQIAEQFIVEHVRDTSAQQRMPLVARLGSANKSLFEVISLMENNIEEPLSREELA
CHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH
RLANMSQRQLQRLFREHLGMTPTHYYLTLRLRRARELLLQTDMSIMHITMACGFQSACHF
HHHCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH
SKSYRDAFGVAPTRERRKQVAPLAQGTPPGGPALPTLAIHA
HHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
SPDRTASLSHFAFMPLPNFTMIAFTNAIEVLRMANYLSGQPLYRWSVISPDGGPVTASN
CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCC
GLTVDTGPAECAGQPDIVFVCGGVDVQRATTPAHLSALRRFARAGIPLGSLCTGTYALAK
CEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SGLLAGYACAIHWENMSALKEEFPDTRFLKELFVIDRDRITCTGGVAPLDMMLNLIAARV
CCCCEEEEEEEEECHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHH
GTARVTQIAEQFIVEHVRDTSAQQRMPLVARLGSANKSLFEVISLMENNIEEPLSREELA
CHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH
RLANMSQRQLQRLFREHLGMTPTHYYLTLRLRRARELLLQTDMSIMHITMACGFQSACHF
HHHCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH
SKSYRDAFGVAPTRERRKQVAPLAQGTPPGGPALPTLAIHA
HHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]