Click here to switch to the map view.

The map label for this gene is yeaW [H]

Identifier: 189353719

GI number: 189353719

Start: 1984963

End: 1986204

Strand: Reverse

Name: yeaW [H]

Synonym: BMULJ_04964

Alternate gene names: 189353719

Gene position: 1986204-1984963 (Counterclockwise)

Preceding gene: 189353720

Following gene: 189353718

Centisome position: 80.31

GC content: 63.04

Gene sequence:

>1242_bases
ATGAAAGTATCGGCAGACATTCGTGCACTGATCGAGCGACGCAAGGAAGGCCACAGCCTCGAGGCGCCGTTCTACACGAG
CGAGGAGATTTTCGCGCTGGACATGGAAGCGATCTTCCGCCAGCACTGGATCCAGGTTGCGGTCGAACCCGACATTCCCG
AGCCGGGCGACTACGTGACGGTCGAGCTCGGCAGCGATTCGATCCTGATCGTGCGCGACGACGACATGGAGATCCGTGCG
TTCCACAACGTGTGCCGTCACCGCGGCGCGCGCCTGTGCAACGAGGACAAGGGTTCGGTCGGCAACATCGTGTGCCCGTA
CCACAGCTGGACGTACAACCTGACGGGCCAGCTGATGTTCGCCGAGCACATGGGCGAGAAGTTCGACCGCTGCAAGCACA
GCCTGAAGCCGGTGCACGTCGAGAACCTGGCGGGCCTGATCTTCATCTGCCTCGCCGAGGAGCCGCCCGCCGATTTCGCG
CAGATGCGCGCCGCGATGGAGCCGTATCTGCTGCCGCACGATCTGCCGAACACGAAGATCGCCGCGCAGATCGACATCAT
CGAGGAAGGCAACTGGAAGCTCACGATGGAGAACAACCGCGAGTGCTATCACTGCGTCGCGAACCATCCGGAGCTGACGA
TCTCGCTGTACGAATACGGGTTCGGCTATCAACGCTCGGAGGCAAACGCCGAAGGGATGGACGCCTTTGCGGAAACCTGC
ATCCGCCGCGGCAAGGAATGGGCCGAGATGGGGCTGCCGTCGGTCGAGATCGAGAAGCTGCTCGACGTGACGGGCTTTCG
TACGCAGCGACTGCCGCTCGATCGCAGCGGCGAGTCGCAGACGCTCGACGCCAAGGTCGCCTCGAAGAAGCTGCTCGGCG
AATTCCGCCAGGCCGATCTCGGCGGGCTTTCGTTCTGGACGCAGCCGAACTCGTGGCATCACTTCATGAGCGATCACATC
GTGACGTTCTCGGTGATTCCGCTGTCGGCCGGCAAGACGCTCGTGCGCACCAAGTGGCTCGTGCACAAGGATGCGAAGGA
AGGCATCGACTACGACGTGAAGAACCTGACCGCCGTGTGGAACGCGACCAACGACCAGGACCGCGCGCTCGTCGAATTCT
CGCAGCGCGGCGCGAACAGCAGCGCGTACGAGCCCGGCCCGTATTCGCCGTTCACGGAAGGGCTCGTCGAGAAGTTCTCG
GCGTGGTACATCGGCCGGCTCGCCGAAAAGACCGGCGCATAG

Upstream 100 bases:

>100_bases
AAAAGCACAAGTGATCCTCGCGTATTTGCGCGAGCATCAGCTCATCGACTATTGATTCTGTCGGCAAGAACCCAGGGATG
CAAGGAATCCGGAGCAAACG

Downstream 100 bases:

>100_bases
CGATTAGCGATTTAGCAGCGGAGTCAAACATGATGCGAGATGCGGCCAATTTCGAGCCGACCGACAGCCGGGTCACGCGC
CCGGCTTTCTGGAACGCCCT

Product: ring-hydroxylating dioxygenase large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MKVSADIRALIERRKEGHSLEAPFYTSEEIFALDMEAIFRQHWIQVAVEPDIPEPGDYVTVELGSDSILIVRDDDMEIRA
FHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLTGQLMFAEHMGEKFDRCKHSLKPVHVENLAGLIFICLAEEPPADFA
QMRAAMEPYLLPHDLPNTKIAAQIDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQRSEANAEGMDAFAETC
IRRGKEWAEMGLPSVEIEKLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFRQADLGGLSFWTQPNSWHHFMSDHI
VTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVWNATNDQDRALVEFSQRGANSSAYEPGPYSPFTEGLVEKFS
AWYIGRLAEKTGA

Sequences:

>Translated_413_residues
MKVSADIRALIERRKEGHSLEAPFYTSEEIFALDMEAIFRQHWIQVAVEPDIPEPGDYVTVELGSDSILIVRDDDMEIRA
FHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLTGQLMFAEHMGEKFDRCKHSLKPVHVENLAGLIFICLAEEPPADFA
QMRAAMEPYLLPHDLPNTKIAAQIDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQRSEANAEGMDAFAETC
IRRGKEWAEMGLPSVEIEKLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFRQADLGGLSFWTQPNSWHHFMSDHI
VTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVWNATNDQDRALVEFSQRGANSSAYEPGPYSPFTEGLVEKFS
AWYIGRLAEKTGA
>Mature_413_residues
MKVSADIRALIERRKEGHSLEAPFYTSEEIFALDMEAIFRQHWIQVAVEPDIPEPGDYVTVELGSDSILIVRDDDMEIRA
FHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLTGQLMFAEHMGEKFDRCKHSLKPVHVENLAGLIFICLAEEPPADFA
QMRAAMEPYLLPHDLPNTKIAAQIDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQRSEANAEGMDAFAETC
IRRGKEWAEMGLPSVEIEKLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFRQADLGGLSFWTQPNSWHHFMSDHI
VTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVWNATNDQDRALVEFSQRGANSSAYEPGPYSPFTEGLVEKFS
AWYIGRLAEKTGA

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=208, Percent_Identity=35.0961538461538, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1788888, Length=195, Percent_Identity=31.7948717948718, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 46776; Mature: 46776

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSADIRALIERRKEGHSLEAPFYTSEEIFALDMEAIFRQHWIQVAVEPDIPEPGDYVT
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHEEEEECCCCCCCCCEEE
VELGSDSILIVRDDDMEIRAFHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLTGQLMF
EEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEECCEEEEE
AEHMGEKFDRCKHSLKPVHVENLAGLIFICLAEEPPADFAQMRAAMEPYLLPHDLPNTKI
HHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEE
AAQIDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQRSEANAEGMDAFAETC
EEEEEEEECCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
IRRGKEWAEMGLPSVEIEKLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFRQADL
HHCCCHHHHHCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
GGLSFWTQPNSWHHFMSDHIVTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVW
CCEEEECCCCCHHHHHCCCEEEEEEEEECCCCHHHHHHHHHCCCHHCCCCCCHHHEEEEE
NATNDQDRALVEFSQRGANSSAYEPGPYSPFTEGLVEKFSAWYIGRLAEKTGA
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVSADIRALIERRKEGHSLEAPFYTSEEIFALDMEAIFRQHWIQVAVEPDIPEPGDYVT
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHEEEEECCCCCCCCCEEE
VELGSDSILIVRDDDMEIRAFHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLTGQLMF
EEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEECCEEEEE
AEHMGEKFDRCKHSLKPVHVENLAGLIFICLAEEPPADFAQMRAAMEPYLLPHDLPNTKI
HHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEE
AAQIDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQRSEANAEGMDAFAETC
EEEEEEEECCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
IRRGKEWAEMGLPSVEIEKLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFRQADL
HHCCCHHHHHCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
GGLSFWTQPNSWHHFMSDHIVTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVW
CCEEEECCCCCHHHHHCCCEEEEEEEEECCCCHHHHHHHHHCCCHHCCCCCCHHHEEEEE
NATNDQDRALVEFSQRGANSSAYEPGPYSPFTEGLVEKFSAWYIGRLAEKTGA
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]