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The map label for this gene is lsrB [H]

Identifier: 189353713

GI number: 189353713

Start: 1977369

End: 1978361

Strand: Reverse

Name: lsrB [H]

Synonym: BMULJ_04958

Alternate gene names: 189353713

Gene position: 1978361-1977369 (Counterclockwise)

Preceding gene: 189353715

Following gene: 189353712

Centisome position: 79.99

GC content: 66.87

Gene sequence:

>993_bases
ATGTCAGGAAACTTCGTGCGCGCGCTGTGCGCGGGCTTGACCGCATTCGTTCTCTCGATGGGTAGTGCGGTGGCGTCGCC
CGACAAGCCGGTGATCGGCGTCGTCGTGAAGATCGGCGGCATTCCATGGTTCAACGCGATGGACGCCGGCATCCGCAAAC
GGGCCGAGCAACTCGGCGTGAAGGCGTTCATGGTCGGGCCGACGAGCGCCGATCCGGCGCTGCAGGTGCGCGCGATCGAG
GATCTGATCGCGCAGCGCGTCGACGTGATCGGCGTCGTGCCGAACGACGCGAAGGTGCTCGAACCGGTGCTGCAGCGCGC
CCGCGCGGCCGGCATCAAGGTCGTCACGCACGAGTCGCCGAACCAGCAGAACGTCGACTGGAATTTCGAACTCGCCTCCG
CGAAGGGTTTCGGCGAAGCGTATGCGAAAAGCCTCGCGAGCGCGGTGGGCGGCAAGGGCGAGTATGCGGTGTTCGTCGGC
TCGCTGACCGTGCCGCTGCACAACGCGTGGGCCGATGCGGCGATCGCCTACCTGAAGGCCAATGCGCCGGACATGAAGCT
CGTCGGCGATCGCTACGGCGTTGCCGAAGACGTCGACGCATCGCGCAAGACGGCGCTCGACCTGATGCGTGCACATCCGA
ATCTGAAGGCGATTCTCGCGTTCGGCAGCCAGGGACCGATCGGCGCCGCGCGCGCCGTCGCGGAGCGGCAGGCGAAAGGC
AAGGTCGTCGTGCTCGGCCCGTTCTCGCCGGGGCAAGGCCGCCGGCTCGTGCACGAGGGCGTGCTGACGGGCGGCTACAT
GTGGAATCCCGAGCAGGCCGGCGAAGTGTTCGTGACGCTCGGCACGATGCTCGCGAAGGGGCAGCCGGTGAAGGACGGCG
CGACGATTCCCGGGCTCGGCGTCGTGCATCCCGAAGGACACAACCTGATCGTCAACCAGCTCGTCGAACTCAACGAAAAG
ACCGTCGACACGCTCGCGAAGCAAGGGCTCTGA

Upstream 100 bases:

>100_bases
ATTCAGCATCAGCAAAACAGATTGCTGAATGGATTTAGCAACTGGCCGGACGCGCCTCCCGACGATGGCGGCGCGATGGT
CGCCTTCCGATGGAGGAGAC

Downstream 100 bases:

>100_bases
GCGACCCGTGGCAAACGCGCCGTATCGACACGGCGCGCACTGGAGAGTTGCGATGATGTCAGTCCATTCAGGCGGTCGCG
CAGCGGTCGCGCGATCGATG

Product: simple sugar transport system substrate-binding protein

Products: NA

Alternate protein names: AI-2-binding protein lsrB [H]

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSGNFVRALCAGLTAFVLSMGSAVASPDKPVIGVVVKIGGIPWFNAMDAGIRKRAEQLGVKAFMVGPTSADPALQVRAIE
DLIAQRVDVIGVVPNDAKVLEPVLQRARAAGIKVVTHESPNQQNVDWNFELASAKGFGEAYAKSLASAVGGKGEYAVFVG
SLTVPLHNAWADAAIAYLKANAPDMKLVGDRYGVAEDVDASRKTALDLMRAHPNLKAILAFGSQGPIGAARAVAERQAKG
KVVVLGPFSPGQGRRLVHEGVLTGGYMWNPEQAGEVFVTLGTMLAKGQPVKDGATIPGLGVVHPEGHNLIVNQLVELNEK
TVDTLAKQGL

Sequences:

>Translated_330_residues
MSGNFVRALCAGLTAFVLSMGSAVASPDKPVIGVVVKIGGIPWFNAMDAGIRKRAEQLGVKAFMVGPTSADPALQVRAIE
DLIAQRVDVIGVVPNDAKVLEPVLQRARAAGIKVVTHESPNQQNVDWNFELASAKGFGEAYAKSLASAVGGKGEYAVFVG
SLTVPLHNAWADAAIAYLKANAPDMKLVGDRYGVAEDVDASRKTALDLMRAHPNLKAILAFGSQGPIGAARAVAERQAKG
KVVVLGPFSPGQGRRLVHEGVLTGGYMWNPEQAGEVFVTLGTMLAKGQPVKDGATIPGLGVVHPEGHNLIVNQLVELNEK
TVDTLAKQGL
>Mature_329_residues
SGNFVRALCAGLTAFVLSMGSAVASPDKPVIGVVVKIGGIPWFNAMDAGIRKRAEQLGVKAFMVGPTSADPALQVRAIED
LIAQRVDVIGVVPNDAKVLEPVLQRARAAGIKVVTHESPNQQNVDWNFELASAKGFGEAYAKSLASAVGGKGEYAVFVGS
LTVPLHNAWADAAIAYLKANAPDMKLVGDRYGVAEDVDASRKTALDLMRAHPNLKAILAFGSQGPIGAARAVAERQAKGK
VVVLGPFSPGQGRRLVHEGVLTGGYMWNPEQAGEVFVTLGTMLAKGQPVKDGATIPGLGVVHPEGHNLIVNQLVELNEKT
VDTLAKQGL

Specific function: Part of the ABC transporter complex lsrABCD involved in autoinducer 2 (AI-2) import. Binds AI-2 and delivers it to the lsrC and lsrD permeases [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787795, Length=300, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1790526, Length=288, Percent_Identity=27.4305555555556, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34551; Mature: 34420

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNFVRALCAGLTAFVLSMGSAVASPDKPVIGVVVKIGGIPWFNAMDAGIRKRAEQLGV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCC
KAFMVGPTSADPALQVRAIEDLIAQRVDVIGVVPNDAKVLEPVLQRARAAGIKVVTHESP
EEEEECCCCCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCEEEEEECCC
NQQNVDWNFELASAKGFGEAYAKSLASAVGGKGEYAVFVGSLTVPLHNAWADAAIAYLKA
CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHHEEEC
NAPDMKLVGDRYGVAEDVDASRKTALDLMRAHPNLKAILAFGSQGPIGAARAVAERQAKG
CCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCC
KVVVLGPFSPGQGRRLVHEGVLTGGYMWNPEQAGEVFVTLGTMLAKGQPVKDGATIPGLG
CEEEEECCCCCCCCHHHHHCCEECCEEECCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCE
VVHPEGHNLIVNQLVELNEKTVDTLAKQGL
EECCCCCCHHHHHHHHHCHHHHHHHHHCCC
>Mature Secondary Structure 
SGNFVRALCAGLTAFVLSMGSAVASPDKPVIGVVVKIGGIPWFNAMDAGIRKRAEQLGV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCC
KAFMVGPTSADPALQVRAIEDLIAQRVDVIGVVPNDAKVLEPVLQRARAAGIKVVTHESP
EEEEECCCCCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCEEEEEECCC
NQQNVDWNFELASAKGFGEAYAKSLASAVGGKGEYAVFVGSLTVPLHNAWADAAIAYLKA
CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHHEEEC
NAPDMKLVGDRYGVAEDVDASRKTALDLMRAHPNLKAILAFGSQGPIGAARAVAERQAKG
CCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCC
KVVVLGPFSPGQGRRLVHEGVLTGGYMWNPEQAGEVFVTLGTMLAKGQPVKDGATIPGLG
CEEEEECCCCCCCCHHHHHCCEECCEEECCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCE
VVHPEGHNLIVNQLVELNEKTVDTLAKQGL
EECCCCCCHHHHHHHHHCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA