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The map label for this gene is glxA [H]

Identifier: 189353694

GI number: 189353694

Start: 1955744

End: 1956688

Strand: Direct

Name: glxA [H]

Synonym: BMULJ_04939

Alternate gene names: 189353694

Gene position: 1955744-1956688 (Clockwise)

Preceding gene: 189353693

Following gene: 189353695

Centisome position: 79.08

GC content: 68.47

Gene sequence:

>945_bases
ATGCCCGAGGATTTCCACTTCCTGCTGCTGCCCGGCTTTTCCGCGCTCGGCTTCATGTCCGCCGTCGAGCCGCTGCGCGT
CGCGAACCGGTTTCGCACCGAGCTTTACCGCTGGCACGTGCTGAGCATCGACGGTGCCCCCGTGCGCGCGAGCAACGGCA
TCCCGGTCGCCGCCGAAGCCGCTTGCGCGGACGTCGAGCGCGTCGATACGGTCTTCGTCGTCGCCGGCTTCGAACCGCTC
GCCTGCTACACGCGCGCGCTCGGCGACTGGTTGCGCCAGCAGCATCGGCACGGTGCGACGCTCGGCGGCATCGATACGGG
CAGCTTCGTGCTCGCGGAAGCCGGGCTGTTCGACGCGTCGCAGCCGCTGACCGTGCACTGGGAAGCGCTCGCCGCGTTTC
GCGAGCGCTATCCGCGGCTGAAGGCGACGCAAGAGCTGTTCGAGATCGACGCACGCCGCATCACGTGTGCGGGCGGCACC
GCGTCGATCGACATGATGCTCGACCTGATCGGCCGCCGGCATGGCGCCGAACTCGCGGCCGTGATCTCCGAACAATTCGT
CGTCAGCCGGATCCGGCAGCGCTCGGACAGCCAGCGGCTCGAGATCGCCGCGCGCTACGGCGTGCACAACCGCAAGCTGA
TCCAGGTGATCGGCACGATGCAGCGCCATATGGAGAACCCGCTCGGCTCGGACGCGCTCGCGCAGGAAGTCTCGATCACG
CGCCGCCAGCTCGAGCGGCTGTTCAGCGCGACGCTCAACGACACGCCGACGCGCTTCTATCAGAACCTGCGGCTCGACCG
CGCACGCGAACTGCTGCAGCAGACGGACATGAGCATCACGTCGGTGTGCGTCGCGTGCGGATTCGAATCGCCGTCGCATT
TCTCGCGCGCGTATCGCGCGCGCTTCGGGATGAGCCCGCGCAACGACCGGTGCGCGACGCGCTGA

Upstream 100 bases:

>100_bases
GGTGCAAAATCGCACTGAGCCGGCCCGAAACCCGCGATAATCTGCGGCAGACCGTTGCGCCGTCGCACGCGACCTATCGT
CGATTTCTTCCTACGCTCCA

Downstream 100 bases:

>100_bases
AGCGGCCGGCGCTTGCACGGCGTACCGGCACCGGCGCCGGCATCGGAACGTATCGCGGGCCGGCTACAATCGCCGTTCGA
CCCGCAACCGATGGACGGCT

Product: AraC subfamily transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MPEDFHFLLLPGFSALGFMSAVEPLRVANRFRTELYRWHVLSIDGAPVRASNGIPVAAEAACADVERVDTVFVVAGFEPL
ACYTRALGDWLRQQHRHGATLGGIDTGSFVLAEAGLFDASQPLTVHWEALAAFRERYPRLKATQELFEIDARRITCAGGT
ASIDMMLDLIGRRHGAELAAVISEQFVVSRIRQRSDSQRLEIAARYGVHNRKLIQVIGTMQRHMENPLGSDALAQEVSIT
RRQLERLFSATLNDTPTRFYQNLRLDRARELLQQTDMSITSVCVACGFESPSHFSRAYRARFGMSPRNDRCATR

Sequences:

>Translated_314_residues
MPEDFHFLLLPGFSALGFMSAVEPLRVANRFRTELYRWHVLSIDGAPVRASNGIPVAAEAACADVERVDTVFVVAGFEPL
ACYTRALGDWLRQQHRHGATLGGIDTGSFVLAEAGLFDASQPLTVHWEALAAFRERYPRLKATQELFEIDARRITCAGGT
ASIDMMLDLIGRRHGAELAAVISEQFVVSRIRQRSDSQRLEIAARYGVHNRKLIQVIGTMQRHMENPLGSDALAQEVSIT
RRQLERLFSATLNDTPTRFYQNLRLDRARELLQQTDMSITSVCVACGFESPSHFSRAYRARFGMSPRNDRCATR
>Mature_313_residues
PEDFHFLLLPGFSALGFMSAVEPLRVANRFRTELYRWHVLSIDGAPVRASNGIPVAAEAACADVERVDTVFVVAGFEPLA
CYTRALGDWLRQQHRHGATLGGIDTGSFVLAEAGLFDASQPLTVHWEALAAFRERYPRLKATQELFEIDARRITCAGGTA
SIDMMLDLIGRRHGAELAAVISEQFVVSRIRQRSDSQRLEIAARYGVHNRKLIQVIGTMQRHMENPLGSDALAQEVSITR
RQLERLFSATLNDTPTRFYQNLRLDRARELLQQTDMSITSVCVACGFESPSHFSRAYRARFGMSPRNDRCATR

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=99, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35199; Mature: 35067

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEDFHFLLLPGFSALGFMSAVEPLRVANRFRTELYRWHVLSIDGAPVRASNGIPVAAEA
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEECCCCCCCCHHH
ACADVERVDTVFVVAGFEPLACYTRALGDWLRQQHRHGATLGGIDTGSFVLAEAGLFDAS
HHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEECCCCCCC
QPLTVHWEALAAFRERYPRLKATQELFEIDARRITCAGGTASIDMMLDLIGRRHGAELAA
CCCEEHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCHHHHH
VISEQFVVSRIRQRSDSQRLEIAARYGVHNRKLIQVIGTMQRHMENPLGSDALAQEVSIT
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RRQLERLFSATLNDTPTRFYQNLRLDRARELLQQTDMSITSVCVACGFESPSHFSRAYRA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHH
RFGMSPRNDRCATR
HCCCCCCCCCCCCC
>Mature Secondary Structure 
PEDFHFLLLPGFSALGFMSAVEPLRVANRFRTELYRWHVLSIDGAPVRASNGIPVAAEA
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEECCCCCCCCHHH
ACADVERVDTVFVVAGFEPLACYTRALGDWLRQQHRHGATLGGIDTGSFVLAEAGLFDAS
HHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEECCCCCCC
QPLTVHWEALAAFRERYPRLKATQELFEIDARRITCAGGTASIDMMLDLIGRRHGAELAA
CCCEEHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCHHHHH
VISEQFVVSRIRQRSDSQRLEIAARYGVHNRKLIQVIGTMQRHMENPLGSDALAQEVSIT
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RRQLERLFSATLNDTPTRFYQNLRLDRARELLQQTDMSITSVCVACGFESPSHFSRAYRA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHH
RFGMSPRNDRCATR
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]