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The map label for this gene is 189353685

Identifier: 189353685

GI number: 189353685

Start: 1947609

End: 1948826

Strand: Reverse

Name: 189353685

Synonym: BMULJ_04930

Alternate gene names: NA

Gene position: 1948826-1947609 (Counterclockwise)

Preceding gene: 189353686

Following gene: 189353684

Centisome position: 78.8

GC content: 67.73

Gene sequence:

>1218_bases
ATGAACAGTCTGACGACGCCGCGCCGGATCGCGGCGGCGGTGGCGGCGCTCGCCGTCGCGCAGGGCGTGCAGGCATCGAG
CAGCGTCACGCTGTATGGCGACGTCGATGCCGGCATCACATACACGAACGATCAGCAGACGACGAGCGCCGACGGCAGCG
TGCGCGGCGGCCGCGCCGTGCAGATCGGCGGCGGCAATCTCGCACCGTCGCGCGTCGGCTTGACAGGCAGCGAGGACATC
GGCGGCGGCACGTCCGTGACGTTCAAGCTCGAGAACAGCTTCTGGACGGGCAGCGGCAGCCTGCTGCAGGCCGGTACGCT
GTTCAACCAGAACGCGTGGGTCGGCTTGACGAACGAACGCTACGGCACGCTCACCGTCGGCCGCCAGTTCGACGCGTACA
CGACGACGCTCGCGCCGTACGCATCGAGCATTCCGTGGGCGACGCTGTACGGCTCGCATATCGGCGACGTCGACAACCTG
AACGCGGCGCTCAACCTGAACAGCGCGATTCAGTACGCGAGCCCGACCTTCGCGGGCTTCTCGTTCAGCGGCACGTTTTC
GTTCGGCGGCGTGGCCGGCGATTTCTCGCGGCAGCGCGGCTGGGCTTTGGCCGCCAGCTACAACCGCGCGCCGTTCTCGT
TCGGCGTGGGCGTGCTCGATCTGAACCGGCCGCTCGACGCGGCGCTCGGCGGCGCGAGCGGCTATATCGGCGATTTCGCG
TGCTCGAACCCGGCCGCGATGTATTGCACGCTGCAGAATGCGCGATCGTTGACGGCGATCGGCGCGGGCGGTGCGTACAC
GATCGGGCCGCTGACACTCGGCCTCGTCTACACGCATACGACGCTCGACGACAGCCGGTACTTTGCCGATGCCGCGCATC
CGCACGGCGCCGACGCACGCTTCGACATCGTCGAGGTGAATGCGGCGTTCGCGGTGTCGCCGGCGCTGACGCTCGGCGCT
GCGTACATCTACAACGCGATGAAGACCGACGCGAGCGGCTCGCCGACCTTCCATCAGGTCAATCTCGGCGCGACCTACAA
CCTCTCGAAGCGCACGGCGCTGTATGCGGTCGGCTTCTTCCAGCAGGCCGCGGGGCACGGCATCGGTCGCGATCCGGCGA
CGGGCGCGCCGGCCAACTATGCGCAGATTCCGAACCTGCCGAATGCGAACGGCAATCGGCAGCTGGCATTGACGATGGGG
GTGCGGCACAACTTCTGA

Upstream 100 bases:

>100_bases
CGCGTGCCCGCTCGCTTCAGCAGTGCGCCTCGCGACGGCAGGCCGATGCATGCGCGGTCCGTCGCGCGCGACACGAACGC
GATCGATCAGGGGGATGACG

Downstream 100 bases:

>100_bases
GCAGCCGAGCCGCGCGCCGCACGCCGCGCAGGCACGCGGCGCCGCAGCCCGACACGGACTGCCCGCCGCAACTCGCGCGA
CGCCGCATCCAAACAAACCC

Product: outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MNSLTTPRRIAAAVAALAVAQGVQASSSVTLYGDVDAGITYTNDQQTTSADGSVRGGRAVQIGGGNLAPSRVGLTGSEDI
GGGTSVTFKLENSFWTGSGSLLQAGTLFNQNAWVGLTNERYGTLTVGRQFDAYTTTLAPYASSIPWATLYGSHIGDVDNL
NAALNLNSAIQYASPTFAGFSFSGTFSFGGVAGDFSRQRGWALAASYNRAPFSFGVGVLDLNRPLDAALGGASGYIGDFA
CSNPAAMYCTLQNARSLTAIGAGGAYTIGPLTLGLVYTHTTLDDSRYFADAAHPHGADARFDIVEVNAAFAVSPALTLGA
AYIYNAMKTDASGSPTFHQVNLGATYNLSKRTALYAVGFFQQAAGHGIGRDPATGAPANYAQIPNLPNANGNRQLALTMG
VRHNF

Sequences:

>Translated_405_residues
MNSLTTPRRIAAAVAALAVAQGVQASSSVTLYGDVDAGITYTNDQQTTSADGSVRGGRAVQIGGGNLAPSRVGLTGSEDI
GGGTSVTFKLENSFWTGSGSLLQAGTLFNQNAWVGLTNERYGTLTVGRQFDAYTTTLAPYASSIPWATLYGSHIGDVDNL
NAALNLNSAIQYASPTFAGFSFSGTFSFGGVAGDFSRQRGWALAASYNRAPFSFGVGVLDLNRPLDAALGGASGYIGDFA
CSNPAAMYCTLQNARSLTAIGAGGAYTIGPLTLGLVYTHTTLDDSRYFADAAHPHGADARFDIVEVNAAFAVSPALTLGA
AYIYNAMKTDASGSPTFHQVNLGATYNLSKRTALYAVGFFQQAAGHGIGRDPATGAPANYAQIPNLPNANGNRQLALTMG
VRHNF
>Mature_405_residues
MNSLTTPRRIAAAVAALAVAQGVQASSSVTLYGDVDAGITYTNDQQTTSADGSVRGGRAVQIGGGNLAPSRVGLTGSEDI
GGGTSVTFKLENSFWTGSGSLLQAGTLFNQNAWVGLTNERYGTLTVGRQFDAYTTTLAPYASSIPWATLYGSHIGDVDNL
NAALNLNSAIQYASPTFAGFSFSGTFSFGGVAGDFSRQRGWALAASYNRAPFSFGVGVLDLNRPLDAALGGASGYIGDFA
CSNPAAMYCTLQNARSLTAIGAGGAYTIGPLTLGLVYTHTTLDDSRYFADAAHPHGADARFDIVEVNAAFAVSPALTLGA
AYIYNAMKTDASGSPTFHQVNLGATYNLSKRTALYAVGFFQQAAGHGIGRDPATGAPANYAQIPNLPNANGNRQLALTMG
VRHNF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41914; Mature: 41914

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLTTPRRIAAAVAALAVAQGVQASSSVTLYGDVDAGITYTNDQQTTSADGSVRGGRAV
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCEEE
QIGGGNLAPSRVGLTGSEDIGGGTSVTFKLENSFWTGSGSLLQAGTLFNQNAWVGLTNER
EECCCCCCCCEECCCCCCCCCCCCEEEEEECCCEECCCCCEEEECEEECCCEEEEECCCC
YGTLTVGRQFDAYTTTLAPYASSIPWATLYGSHIGDVDNLNAALNLNSAIQYASPTFAGF
CEEEEECCCCCCCEEECCCHHCCCCHHEECCCCCCCCCCCCEEEECCCCEEECCCCCCCE
SFSGTFSFGGVAGDFSRQRGWALAASYNRAPFSFGVGVLDLNRPLDAALGGASGYIGDFA
EEECCEECCCCCCCCCCCCCEEEEECCCCCCHHHCCEEEECCCCHHHHCCCCCCCCCCCC
CSNPAAMYCTLQNARSLTAIGAGGAYTIGPLTLGLVYTHTTLDDSRYFADAAHPHGADAR
CCCCCEEEEEECCCCEEEEEECCCCEEECCEEEEEEEEEEECCCCCEEECCCCCCCCCCE
FDIVEVNAAFAVSPALTLGAAYIYNAMKTDASGSPTFHQVNLGATYNLSKRTALYAVGFF
EEEEEECCEEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCEEEEEEHHH
QQAAGHGIGRDPATGAPANYAQIPNLPNANGNRQLALTMGVRHNF
HHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MNSLTTPRRIAAAVAALAVAQGVQASSSVTLYGDVDAGITYTNDQQTTSADGSVRGGRAV
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCEEE
QIGGGNLAPSRVGLTGSEDIGGGTSVTFKLENSFWTGSGSLLQAGTLFNQNAWVGLTNER
EECCCCCCCCEECCCCCCCCCCCCEEEEEECCCEECCCCCEEEECEEECCCEEEEECCCC
YGTLTVGRQFDAYTTTLAPYASSIPWATLYGSHIGDVDNLNAALNLNSAIQYASPTFAGF
CEEEEECCCCCCCEEECCCHHCCCCHHEECCCCCCCCCCCCEEEECCCCEEECCCCCCCE
SFSGTFSFGGVAGDFSRQRGWALAASYNRAPFSFGVGVLDLNRPLDAALGGASGYIGDFA
EEECCEECCCCCCCCCCCCCEEEEECCCCCCHHHCCEEEECCCCHHHHCCCCCCCCCCCC
CSNPAAMYCTLQNARSLTAIGAGGAYTIGPLTLGLVYTHTTLDDSRYFADAAHPHGADAR
CCCCCEEEEEECCCCEEEEEECCCCEEECCEEEEEEEEEEECCCCCEEECCCCCCCCCCE
FDIVEVNAAFAVSPALTLGAAYIYNAMKTDASGSPTFHQVNLGATYNLSKRTALYAVGFF
EEEEEECCEEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCEEEEEEHHH
QQAAGHGIGRDPATGAPANYAQIPNLPNANGNRQLALTMGVRHNF
HHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]