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The map label for this gene is dadA [H]

Identifier: 189353668

GI number: 189353668

Start: 1930630

End: 1931871

Strand: Direct

Name: dadA [H]

Synonym: BMULJ_04913

Alternate gene names: 189353668

Gene position: 1930630-1931871 (Clockwise)

Preceding gene: 189353667

Following gene: 189353678

Centisome position: 78.06

GC content: 72.3

Gene sequence:

>1242_bases
ATGGATTTCGACGTCATCGTTCTCGGCGCGGGCATCGTCGGCGTGTCCGCCGCGCTGCATCTGCAGGACCGCGGCCGCAA
GGTCGCATTGGTCGATCGTTCGGCCCCCGGCGAAGGGACGAGCTTCGGCAACGCGGGCCTGATCGAGCGCTCGTCGGTCG
AACCGTATCCGTTCCCGCGCAGCCCGTTCACGCTGATGCGCTATGCGCTGAACCGATCGACCGACCTGTACTGGCACAGT
GCATCGCTGCCCGCCTTCGCGCCGTGGCTCGCGCGCTTCTGGTGGGAGTCGGCGCCGCAGCGTCACGCAGCTGCCGCGCG
CGACATGCTGCCGCTGATCGAGCGCTGCATCGTCGAACACGACGCGCTGATCGCCCGCGCCGGCGCCGGTGAACTCGTGC
GTGCGAGCGGCTGGATGGAAGCGTTCCGCACGCCGGCCGCATTCGAGCGCGGCGCGGCCGAGGCGCAGCTCACCGCGCGC
CGCCACGGGCTCGGCGTCACGCCGCTCGACGCGGCGGCACTGCTCGCGCAGGAGCCGAGCCTCGCGCCGGGCTTCTGCGG
TGCGCTGCACTGGCGCGACCCGAAAAGCGTCGTCGATCCGTCCGCCTTGGTCAAAGCGTATGCGCGGCTGTTCGAGCAAG
GCGGCGGCACGCTGCTGTCGGGCGACGCGGCAAGCCTCTCCGCACGCTCGCCGGGCTGGGAGGTCGCGACCGAGCACGGC
ACGGTCGCCGCACCGGCCGTCGTCGTCGCGCTCGGCCCGTGGTCCGACACGGTGTTCGCGAAGTTCGGCTACCGCATTCC
CCTTCGCGAGAAGCGCGGCTATCACATGCACTACGCGCCGTCCGCGCGCGGCGTGCCGTCGGCGCCGATCGTCGATCGCG
AATACGGCTACGTGATCGCGCCGATGCGGCGCGGGCTGCGGCTGACGACCGGCGTCGAGATCGCGCGCCGCCGCGTGCCG
CCGACCGGCGTGCAGCTCGAGCGCGCCGAGCGCATCGCACGGCCGGTGTTCGGCTTCGGCGAACGGCTCGATCCGCAGCC
GTGGCTCGGCTTCCGGCCCTGCACGCCCGACATGCGGCCCGTGATCGGCCCGGCGCCCGCGCATCGCGGCATGTGGTTCG
CCTTCGGCCACAACCACCACGGGCTGACGCTCGGCCCCGTCACGGGCCGGCTGCTCGCCGAAATGATGACGGGCGACACG
CCGTTCACCGATCCGGCGCCGTATCGCGCCGATCGCTTCTGA

Upstream 100 bases:

>100_bases
CGAGTATGCTTGCAGTTCAAACGAATTCCGGCACGGGGCCGCACAACGGCGCCCACGTGCTGGCCGGCCAACCGCCTCTT
CCGTCTATTACCACGCGTTC

Downstream 100 bases:

>100_bases
CGCGGCGCGCGCACGCGCACCGCGCCGCGCGTCAGTCGAGCGCGCGCCCGAAGATCCGGATCACCTCGTCGAGATGCTCC
GCCATCGCGCGGCGCGCGGC

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MDFDVIVLGAGIVGVSAALHLQDRGRKVALVDRSAPGEGTSFGNAGLIERSSVEPYPFPRSPFTLMRYALNRSTDLYWHS
ASLPAFAPWLARFWWESAPQRHAAAARDMLPLIERCIVEHDALIARAGAGELVRASGWMEAFRTPAAFERGAAEAQLTAR
RHGLGVTPLDAAALLAQEPSLAPGFCGALHWRDPKSVVDPSALVKAYARLFEQGGGTLLSGDAASLSARSPGWEVATEHG
TVAAPAVVVALGPWSDTVFAKFGYRIPLREKRGYHMHYAPSARGVPSAPIVDREYGYVIAPMRRGLRLTTGVEIARRRVP
PTGVQLERAERIARPVFGFGERLDPQPWLGFRPCTPDMRPVIGPAPAHRGMWFAFGHNHHGLTLGPVTGRLLAEMMTGDT
PFTDPAPYRADRF

Sequences:

>Translated_413_residues
MDFDVIVLGAGIVGVSAALHLQDRGRKVALVDRSAPGEGTSFGNAGLIERSSVEPYPFPRSPFTLMRYALNRSTDLYWHS
ASLPAFAPWLARFWWESAPQRHAAAARDMLPLIERCIVEHDALIARAGAGELVRASGWMEAFRTPAAFERGAAEAQLTAR
RHGLGVTPLDAAALLAQEPSLAPGFCGALHWRDPKSVVDPSALVKAYARLFEQGGGTLLSGDAASLSARSPGWEVATEHG
TVAAPAVVVALGPWSDTVFAKFGYRIPLREKRGYHMHYAPSARGVPSAPIVDREYGYVIAPMRRGLRLTTGVEIARRRVP
PTGVQLERAERIARPVFGFGERLDPQPWLGFRPCTPDMRPVIGPAPAHRGMWFAFGHNHHGLTLGPVTGRLLAEMMTGDT
PFTDPAPYRADRF
>Mature_413_residues
MDFDVIVLGAGIVGVSAALHLQDRGRKVALVDRSAPGEGTSFGNAGLIERSSVEPYPFPRSPFTLMRYALNRSTDLYWHS
ASLPAFAPWLARFWWESAPQRHAAAARDMLPLIERCIVEHDALIARAGAGELVRASGWMEAFRTPAAFERGAAEAQLTAR
RHGLGVTPLDAAALLAQEPSLAPGFCGALHWRDPKSVVDPSALVKAYARLFEQGGGTLLSGDAASLSARSPGWEVATEHG
TVAAPAVVVALGPWSDTVFAKFGYRIPLREKRGYHMHYAPSARGVPSAPIVDREYGYVIAPMRRGLRLTTGVEIARRRVP
PTGVQLERAERIARPVFGFGERLDPQPWLGFRPCTPDMRPVIGPAPAHRGMWFAFGHNHHGLTLGPVTGRLLAEMMTGDT
PFTDPAPYRADRF

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=413, Percent_Identity=25.90799031477, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 44919; Mature: 44919

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDVIVLGAGIVGVSAALHLQDRGRKVALVDRSAPGEGTSFGNAGLIERSSVEPYPFPR
CCCEEEEECCCHHHHHEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCC
SPFTLMRYALNRSTDLYWHSASLPAFAPWLARFWWESAPQRHAAAARDMLPLIERCIVEH
CHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DALIARAGAGELVRASGWMEAFRTPAAFERGAAEAQLTARRHGLGVTPLDAAALLAQEPS
HHHEEECCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCC
LAPGFCGALHWRDPKSVVDPSALVKAYARLFEQGGGTLLSGDAASLSARSPGWEVATEHG
CCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEECCC
TVAAPAVVVALGPWSDTVFAKFGYRIPLREKRGYHMHYAPSARGVPSAPIVDREYGYVIA
CEECCEEEEEECCCCCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEE
PMRRGLRLTTGVEIARRRVPPTGVQLERAERIARPVFGFGERLDPQPWLGFRPCTPDMRP
CCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VIGPAPAHRGMWFAFGHNHHGLTLGPVTGRLLAEMMTGDTPFTDPAPYRADRF
CCCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFDVIVLGAGIVGVSAALHLQDRGRKVALVDRSAPGEGTSFGNAGLIERSSVEPYPFPR
CCCEEEEECCCHHHHHEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCC
SPFTLMRYALNRSTDLYWHSASLPAFAPWLARFWWESAPQRHAAAARDMLPLIERCIVEH
CHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DALIARAGAGELVRASGWMEAFRTPAAFERGAAEAQLTARRHGLGVTPLDAAALLAQEPS
HHHEEECCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCC
LAPGFCGALHWRDPKSVVDPSALVKAYARLFEQGGGTLLSGDAASLSARSPGWEVATEHG
CCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEECCC
TVAAPAVVVALGPWSDTVFAKFGYRIPLREKRGYHMHYAPSARGVPSAPIVDREYGYVIA
CEECCEEEEEECCCCCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEE
PMRRGLRLTTGVEIARRRVPPTGVQLERAERIARPVFGFGERLDPQPWLGFRPCTPDMRP
CCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VIGPAPAHRGMWFAFGHNHHGLTLGPVTGRLLAEMMTGDTPFTDPAPYRADRF
CCCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA