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The map label for this gene is yigC [C]

Identifier: 189353663

GI number: 189353663

Start: 1924088

End: 1925482

Strand: Direct

Name: yigC [C]

Synonym: BMULJ_04908

Alternate gene names: 189353663

Gene position: 1924088-1925482 (Clockwise)

Preceding gene: 189353662

Following gene: 189353664

Centisome position: 77.8

GC content: 69.03

Gene sequence:

>1395_bases
ATGGCGTCGAGCCCTTTCGCCGAGCAGCAGGATTTTCATCACTTCGCGAACGCCTATCGCGCGCATTACCCCGACGACGT
GCTCGCGATCGCGCAGCCGTTGTCGGCGGACCAGGACGTGACGGCCGTCGTCGCGTCGCTCGCGGCGCGCGGGCGGCACG
ACATGCTCGTCTGCGAGCGCGTCGACGGTCTCGCGGTGCCGCTCGTCACGAACGTCTTTGCGTCGCGCACGCGCATCGCC
CGGCTGTTCGGCGTCGACGCGCACGATCTGTTCGATGCATGGCAGCGGCGCGCGAACGCGCCGATCGCGCCGGTCGTCGT
ACCGCACGGGCCCGTGCTCGATCACGTGCTCGAAGGCGACGCGGTCGATCTCGCGCAGTTGCCGATGATCCGCCACTTCG
AAACCGATCGCGGGCCGTACGTGACGAACGCTGTGATCGTCGCGGAAGATCCCGAAACGGGCATCGCGAACCTCAGCTAT
CACCGCTCGATGCGCGCCGCGCGCAATGCGCTCGCGACGAGCCTGCATTCGCGCGGCCATCTATGGCGGATGCTGCACGC
GGCGAAGTCGCGCGGCGATACGCTGAAGGTCGCGATGGTGATCGGCGCGCATCCGCTGTTCATGCTGGCCGCCGCTGCGC
GCGTGCCGTTCGGCGTCGACGAGCGCGCGATCGCGGGCGGGCTGTTCGGCGCACCGCTGCAGCTTGTGCGCACGCCGCGT
TACGGCATCGGTGTGCCGGCCGCGGCCGAGTTCGTGCTCGAAGGCACGATCGATCCCGACGCACACGCCGAGGAAGGCCC
GTTCGGCGAATTCACCGGCTATTCGTCGGACCGATCGACGAACAACGTGCTGCGCGTCGACACGATGATGCGGCGCCGCG
ATGCGTGGCTCGTCGACGTAGTCGGCGGCCCGTATGCGGAGCACCTGACGCTCGCGCGGCTGCCGCGCGAAGCCGAGATG
AGCGAGAAGCTGAAGGCGCGCTTTCCGGCCGTCACCGCGATCCACTATCCGAATTCGGGCACGCACTTTCACTGCTACGT
CGCGCTGAAGCAGACACGCGACGGCGAAGCGCGGCAGATCATGCTCGCGCTGCTCGGCTGGGATCCGTATCTGAAGAACG
TCGTCGCCGTCGACAGCGACGTCGACATCACCGACGACGCGCAGGTGCTCTGGGCCATCGCCACGCACTTCCAGCCGCAT
CGCGACCTGTTCGTCGTCGACGGCCTGCCGGGCAGCCCGCTCGATCCATCGTCGTCGGCCGACGGCACGACGTCGCGGAT
GGGCCTCGATGCGACGCGCGGCGCGCGCTTCGACGGCGTGCGCGCACGCGTCGGCGACGCCGCGATGCAGCGCGTGGCAC
AGCTCGTCGCGCAACTCGACGGAGCCGCGCGATGA

Upstream 100 bases:

>100_bases
GCCTGAAGGCGACGTACGTGTAAGCGCGCGCGGCAGGACCGCGCCGCGCACATGCGCGTGCGGTCCGGCCATTTCTGTTC
CGTATCCGACGGAGTGCATC

Downstream 100 bases:

>100_bases
GCGCGCGCCGCCTCGTGGTCGGCATCAGCGGCGCGTCGGGCTTCGTATACGGGATGCGGCTGCTCGCGCTGCTGCGCGCG
CTCGACATCGAAACGCACGT

Product: putative decarboxylase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MASSPFAEQQDFHHFANAYRAHYPDDVLAIAQPLSADQDVTAVVASLAARGRHDMLVCERVDGLAVPLVTNVFASRTRIA
RLFGVDAHDLFDAWQRRANAPIAPVVVPHGPVLDHVLEGDAVDLAQLPMIRHFETDRGPYVTNAVIVAEDPETGIANLSY
HRSMRAARNALATSLHSRGHLWRMLHAAKSRGDTLKVAMVIGAHPLFMLAAAARVPFGVDERAIAGGLFGAPLQLVRTPR
YGIGVPAAAEFVLEGTIDPDAHAEEGPFGEFTGYSSDRSTNNVLRVDTMMRRRDAWLVDVVGGPYAEHLTLARLPREAEM
SEKLKARFPAVTAIHYPNSGTHFHCYVALKQTRDGEARQIMLALLGWDPYLKNVVAVDSDVDITDDAQVLWAIATHFQPH
RDLFVVDGLPGSPLDPSSSADGTTSRMGLDATRGARFDGVRARVGDAAMQRVAQLVAQLDGAAR

Sequences:

>Translated_464_residues
MASSPFAEQQDFHHFANAYRAHYPDDVLAIAQPLSADQDVTAVVASLAARGRHDMLVCERVDGLAVPLVTNVFASRTRIA
RLFGVDAHDLFDAWQRRANAPIAPVVVPHGPVLDHVLEGDAVDLAQLPMIRHFETDRGPYVTNAVIVAEDPETGIANLSY
HRSMRAARNALATSLHSRGHLWRMLHAAKSRGDTLKVAMVIGAHPLFMLAAAARVPFGVDERAIAGGLFGAPLQLVRTPR
YGIGVPAAAEFVLEGTIDPDAHAEEGPFGEFTGYSSDRSTNNVLRVDTMMRRRDAWLVDVVGGPYAEHLTLARLPREAEM
SEKLKARFPAVTAIHYPNSGTHFHCYVALKQTRDGEARQIMLALLGWDPYLKNVVAVDSDVDITDDAQVLWAIATHFQPH
RDLFVVDGLPGSPLDPSSSADGTTSRMGLDATRGARFDGVRARVGDAAMQRVAQLVAQLDGAAR
>Mature_463_residues
ASSPFAEQQDFHHFANAYRAHYPDDVLAIAQPLSADQDVTAVVASLAARGRHDMLVCERVDGLAVPLVTNVFASRTRIAR
LFGVDAHDLFDAWQRRANAPIAPVVVPHGPVLDHVLEGDAVDLAQLPMIRHFETDRGPYVTNAVIVAEDPETGIANLSYH
RSMRAARNALATSLHSRGHLWRMLHAAKSRGDTLKVAMVIGAHPLFMLAAAARVPFGVDERAIAGGLFGAPLQLVRTPRY
GIGVPAAAEFVLEGTIDPDAHAEEGPFGEFTGYSSDRSTNNVLRVDTMMRRRDAWLVDVVGGPYAEHLTLARLPREAEMS
EKLKARFPAVTAIHYPNSGTHFHCYVALKQTRDGEARQIMLALLGWDPYLKNVVAVDSDVDITDDAQVLWAIATHFQPHR
DLFVVDGLPGSPLDPSSSADGTTSRMGLDATRGARFDGVRARVGDAAMQRVAQLVAQLDGAAR

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=462, Percent_Identity=27.9220779220779, Blast_Score=154, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6320748, Length=374, Percent_Identity=25.1336898395722, Blast_Score=81, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 50410; Mature: 50279

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSPFAEQQDFHHFANAYRAHYPDDVLAIAQPLSADQDVTAVVASLAARGRHDMLVCER
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEC
VDGLAVPLVTNVFASRTRIARLFGVDAHDLFDAWQRRANAPIAPVVVPHGPVLDHVLEGD
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCC
AVDLAQLPMIRHFETDRGPYVTNAVIVAEDPETGIANLSYHRSMRAARNALATSLHSRGH
CCCHHHCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCH
LWRMLHAAKSRGDTLKVAMVIGAHPLFMLAAAARVPFGVDERAIAGGLFGAPLQLVRTPR
HHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHCCCC
YGIGVPAAAEFVLEGTIDPDAHAEEGPFGEFTGYSSDRSTNNVLRVDTMMRRRDAWLVDV
CCCCCCHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCEEEEE
VGGPYAEHLTLARLPREAEMSEKLKARFPAVTAIHYPNSGTHFHCYVALKQTRDGEARQI
CCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEEEECCCCCHHHHH
MLALLGWDPYLKNVVAVDSDVDITDDAQVLWAIATHFQPHRDLFVVDGLPGSPLDPSSSA
HHHHHCCCHHHHCEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCC
DGTTSRMGLDATRGARFDGVRARVGDAAMQRVAQLVAQLDGAAR
CCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASSPFAEQQDFHHFANAYRAHYPDDVLAIAQPLSADQDVTAVVASLAARGRHDMLVCER
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEC
VDGLAVPLVTNVFASRTRIARLFGVDAHDLFDAWQRRANAPIAPVVVPHGPVLDHVLEGD
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCC
AVDLAQLPMIRHFETDRGPYVTNAVIVAEDPETGIANLSYHRSMRAARNALATSLHSRGH
CCCHHHCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCH
LWRMLHAAKSRGDTLKVAMVIGAHPLFMLAAAARVPFGVDERAIAGGLFGAPLQLVRTPR
HHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHCCCC
YGIGVPAAAEFVLEGTIDPDAHAEEGPFGEFTGYSSDRSTNNVLRVDTMMRRRDAWLVDV
CCCCCCHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCEEEEE
VGGPYAEHLTLARLPREAEMSEKLKARFPAVTAIHYPNSGTHFHCYVALKQTRDGEARQI
CCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEEEECCCCCHHHHH
MLALLGWDPYLKNVVAVDSDVDITDDAQVLWAIATHFQPHRDLFVVDGLPGSPLDPSSSA
HHHHHCCCHHHHCEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCC
DGTTSRMGLDATRGARFDGVRARVGDAAMQRVAQLVAQLDGAAR
CCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]